RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PIK3C2BO00750 1634 aa16.31■□□□□ 0.2
BRCA1-222ENST00000493919 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
BRCA1-222ENST00000493919 UBR1Q8IWV7 1749 aa16.29■□□□□ 0.2
BRCA1-222ENST00000493919 FOXD1Q16676 465 aa16.28■□□□□ 0.2
BRCA1-222ENST00000493919 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
BRCA1-222ENST00000493919 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
BRCA1-222ENST00000493919 TRPM2O94759 1503 aa16.27■□□□□ 0.2
BRCA1-222ENST00000493919 ADGRB3O60242 1522 aa16.26■□□□□ 0.19
BRCA1-222ENST00000493919 IDI1Q13907 227 aa16.26■□□□□ 0.19
BRCA1-222ENST00000493919 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
BRCA1-222ENST00000493919 CLTCL1P53675 1640 aa16.25■□□□□ 0.19
BRCA1-222ENST00000493919 PTPRTO14522 1441 aa16.24■□□□□ 0.19
BRCA1-222ENST00000493919 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
BRCA1-222ENST00000493919 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
BRCA1-222ENST00000493919 MYO5BQ9ULV0 1848 aa16.23■□□□□ 0.19
BRCA1-222ENST00000493919 PLA2R1Q13018 1463 aa16.23■□□□□ 0.19
BRCA1-222ENST00000493919 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
BRCA1-222ENST00000493919 THEMISQ8N1K5 641 aaPredicted RBP16.23■□□□□ 0.19
BRCA1-222ENST00000493919 KDM5AP29375 1690 aaKnown RBP16.22■□□□□ 0.19
BRCA1-222ENST00000493919 POLR1AO95602 1720 aaPredicted RBP16.22■□□□□ 0.19
BRCA1-222ENST00000493919 TMEM131LA2VDJ0 1609 aa16.21■□□□□ 0.19
BRCA1-222ENST00000493919 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
BRCA1-222ENST00000493919 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.19
BRCA1-222ENST00000493919 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
BRCA1-222ENST00000493919 CCDC144AA2RUR9 1427 aa16.19■□□□□ 0.18
BRCA1-222ENST00000493919 BRD2P25440 801 aaKnown RBP16.19■□□□□ 0.18
BRCA1-222ENST00000493919 KIF1BO60333 1816 aa16.19■□□□□ 0.18
BRCA1-222ENST00000493919 CCDC136Q96JN2 1154 aa16.18■□□□□ 0.18
BRCA1-222ENST00000493919 SLIT1O75093 1534 aa16.18■□□□□ 0.18
BRCA1-222ENST00000493919 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
BRCA1-222ENST00000493919 TMEM2Q9UHN6 1383 aa16.17■□□□□ 0.18
BRCA1-222ENST00000493919 NEURL4Q96JN8 1562 aa16.17■□□□□ 0.18
BRCA1-222ENST00000493919 ANKLE2Q86XL3 938 aa16.16■□□□□ 0.18
BRCA1-222ENST00000493919 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
BRCA1-222ENST00000493919 ARHGAP23Q9P227 1491 aa16.16■□□□□ 0.18
BRCA1-222ENST00000493919 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
BRCA1-222ENST00000493919 AAMPQ13685 434 aa16.14■□□□□ 0.17
BRCA1-222ENST00000493919 TXNDC2Q86VQ3 553 aa16.13■□□□□ 0.17
BRCA1-222ENST00000493919 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
BRCA1-222ENST00000493919 IQGAP1P46940 1657 aa16.13■□□□□ 0.17
BRCA1-222ENST00000493919 RIMS2Q9UQ26 1411 aa16.13■□□□□ 0.17
BRCA1-222ENST00000493919 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
BRCA1-222ENST00000493919 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
BRCA1-222ENST00000493919 PPP1R15AO75807 674 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-222ENST00000493919 LTKP29376 864 aa16.12■□□□□ 0.17
BRCA1-222ENST00000493919 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
BRCA1-222ENST00000493919 NPHP4O75161 1426 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-222ENST00000493919 NUTM2DQ5VT03 806 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-222ENST00000493919 ZFYVE9O95405 1425 aa16.11■□□□□ 0.17
BRCA1-222ENST00000493919 ANKRD30BQ9BXX2 1392 aa16.11■□□□□ 0.17
BRCA1-222ENST00000493919 MED14O60244 1454 aa16.09■□□□□ 0.17
BRCA1-222ENST00000493919 DHX57Q6P158 1386 aaKnown RBP16.09■□□□□ 0.17
BRCA1-222ENST00000493919 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
BRCA1-222ENST00000493919 RGL3Q3MIN7 710 aa16.08■□□□□ 0.16
BRCA1-222ENST00000493919 C14orf37Q86TY3 774 aa16.08■□□□□ 0.16
BRCA1-222ENST00000493919 BCANQ96GW7 911 aa16.08■□□□□ 0.16
BRCA1-222ENST00000493919 NEXMIFQ5QGS0 1516 aa16.08■□□□□ 0.16
BRCA1-222ENST00000493919 HDGFP51858 240 aaKnown RBP16.06■□□□□ 0.16
BRCA1-222ENST00000493919 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.16
BRCA1-222ENST00000493919 RSPH6AQ9H0K4 717 aa16.06■□□□□ 0.16
BRCA1-222ENST00000493919 SPATA31E1Q6ZUB1 1445 aa16.06■□□□□ 0.16
BRCA1-222ENST00000493919 PPLO60437 1756 aa16.05■□□□□ 0.16
BRCA1-222ENST00000493919 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
BRCA1-222ENST00000493919 IFT172Q9UG01 1749 aa16.03■□□□□ 0.16
BRCA1-222ENST00000493919 SLC26A8Q96RN1 970 aa16.02■□□□□ 0.16
BRCA1-222ENST00000493919 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.15
BRCA1-222ENST00000493919 RPGRIP1LQ68CZ1 1315 aa16■□□□□ 0.15
BRCA1-222ENST00000493919 NRXN3Q9Y4C0 1643 aa15.99■□□□□ 0.15
BRCA1-222ENST00000493919 SETBP1Q9Y6X0 1596 aa15.98■□□□□ 0.15
BRCA1-222ENST00000493919 VGFO15240 615 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-222ENST00000493919 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
BRCA1-222ENST00000493919 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
BRCA1-222ENST00000493919 ADAMTS13Q76LX8 1427 aa15.97■□□□□ 0.15
BRCA1-222ENST00000493919 LTBP4Q8N2S1 1624 aa15.96■□□□□ 0.15
BRCA1-222ENST00000493919 RBM10P98175 930 aaKnown RBP15.96■□□□□ 0.14
BRCA1-222ENST00000493919 ZMYND15Q9H091 742 aa15.96■□□□□ 0.14
BRCA1-222ENST00000493919 ADGRF5Q8IZF2 1346 aa15.95■□□□□ 0.14
BRCA1-222ENST00000493919 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
BRCA1-222ENST00000493919 DEKP35659 375 aaKnown RBP15.95■□□□□ 0.14
BRCA1-222ENST00000493919 MYOM2P54296 1465 aa15.94■□□□□ 0.14
BRCA1-222ENST00000493919 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-222ENST00000493919 DCAF11Q8TEB1 546 aa15.94■□□□□ 0.14
BRCA1-222ENST00000493919 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
BRCA1-222ENST00000493919 KDM2AQ9Y2K7 1162 aa15.94■□□□□ 0.14
BRCA1-222ENST00000493919 PIK3C2GO75747 1445 aa15.92■□□□□ 0.14
BRCA1-222ENST00000493919 ALKQ9UM73 1620 aa15.92■□□□□ 0.14
BRCA1-222ENST00000493919 A0A0U1RQG5 324 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-222ENST00000493919 SETD1AO15047 1707 aaKnown RBP15.92■□□□□ 0.14
BRCA1-222ENST00000493919 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
BRCA1-222ENST00000493919 CPS1P31327 1500 aa15.92■□□□□ 0.14
BRCA1-222ENST00000493919 NWD1Q149M9 1564 aa15.91■□□□□ 0.14
BRCA1-222ENST00000493919 CHD2O14647 1828 aaKnown RBP15.9■□□□□ 0.14
BRCA1-222ENST00000493919 CCER1Q8TC90 406 aaPredicted RBP15.9■□□□□ 0.14
BRCA1-222ENST00000493919 METP08581 1390 aa15.89■□□□□ 0.14
BRCA1-222ENST00000493919 NRXN1Q9ULB1 1477 aa15.89■□□□□ 0.13
BRCA1-222ENST00000493919 LAMC1P11047 1609 aa15.89■□□□□ 0.13
BRCA1-222ENST00000493919 TPRNQ4KMQ1 711 aa15.88■□□□□ 0.13
BRCA1-222ENST00000493919 CERKQ8TCT0 537 aa15.88■□□□□ 0.13
BRCA1-222ENST00000493919 KCNA6P17658 529 aa15.88■□□□□ 0.13
BRCA1-222ENST00000493919 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms