RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 HRO43593 1189 aa8.7□□□□□ -1.02
COPS3-208ENST00000486032 Q6ZNB5 142 aa8.7□□□□□ -1.02
COPS3-208ENST00000486032 STAC3Q96MF2 364 aa8.7□□□□□ -1.02
COPS3-208ENST00000486032 PLCH2O75038 1416 aa8.69□□□□□ -1.02
COPS3-208ENST00000486032 AKNAQ7Z591 1439 aa8.69□□□□□ -1.02
COPS3-208ENST00000486032 NEO1Q92859 1461 aa8.69□□□□□ -1.02
COPS3-208ENST00000486032 MAP3K1Q13233 1512 aa8.69□□□□□ -1.02
COPS3-208ENST00000486032 SAMD9LQ8IVG5 1584 aa8.69□□□□□ -1.02
COPS3-208ENST00000486032 A0A0G2JS52 829 aa8.68□□□□□ -1.02
COPS3-208ENST00000486032 ZNF777Q9ULD5 760 aaPredicted RBP8.68□□□□□ -1.02
COPS3-208ENST00000486032 CCNB3Q8WWL7 1395 aa8.68□□□□□ -1.02
COPS3-208ENST00000486032 YEATS2Q9ULM3 1422 aa8.68□□□□□ -1.02
COPS3-208ENST00000486032 ARHGAP5Q13017 1502 aa8.68□□□□□ -1.02
COPS3-208ENST00000486032 SUPT6HQ7KZ85 1726 aaKnown RBP8.68□□□□□ -1.02
COPS3-208ENST00000486032 KDM4FA0A1W2PPD8 638 aa8.67□□□□□ -1.02
COPS3-208ENST00000486032 SOX12O15370 315 aa8.67□□□□□ -1.02
COPS3-208ENST00000486032 GPATCH8Q9UKJ3 1502 aaKnown RBP8.67□□□□□ -1.02
COPS3-208ENST00000486032 ITSN2Q9NZM3 1697 aa8.66□□□□□ -1.02
COPS3-208ENST00000486032 ABCC1P33527 1531 aa8.66□□□□□ -1.02
COPS3-208ENST00000486032 ADGRL1O94910 1474 aa8.66□□□□□ -1.02
COPS3-208ENST00000486032 NCOA2Q15596 1464 aa8.66□□□□□ -1.02
COPS3-208ENST00000486032 CFAP74Q9C0B2 1584 aa8.65□□□□□ -1.02
COPS3-208ENST00000486032 SCAPERQ9BY12 1400 aa8.65□□□□□ -1.02
COPS3-208ENST00000486032 TRAPPC8Q9Y2L5 1435 aa8.65□□□□□ -1.02
COPS3-208ENST00000486032 ZNF644Q9H582 1327 aaPredicted RBP8.65□□□□□ -1.02
COPS3-208ENST00000486032 ARHGEF40Q8TER5 1519 aa8.64□□□□□ -1.03
COPS3-208ENST00000486032 SYCP2Q9BX26 1530 aa8.64□□□□□ -1.03
COPS3-208ENST00000486032 DENND4BO75064 1496 aaPredicted RBP8.64□□□□□ -1.03
COPS3-208ENST00000486032 POGZQ7Z3K3 1410 aa8.64□□□□□ -1.03
COPS3-208ENST00000486032 PSDA5PKW4 1024 aaPredicted RBP8.64□□□□□ -1.03
COPS3-208ENST00000486032 PTPN5P54829 565 aa8.64□□□□□ -1.03
COPS3-208ENST00000486032 MS4A4AQ96JQ5 239 aa8.64□□□□□ -1.03
COPS3-208ENST00000486032 CFDP1Q9UEE9 299 aaPredicted RBP8.64□□□□□ -1.03
COPS3-208ENST00000486032 ZMYM4Q5VZL5 1548 aa8.64□□□□□ -1.03
COPS3-208ENST00000486032 PHLDB1Q86UU1 1377 aa8.63□□□□□ -1.03
COPS3-208ENST00000486032 ABCA6Q8N139 1617 aa8.63□□□□□ -1.03
COPS3-208ENST00000486032 CIZ1Q9ULV3 898 aaPredicted RBP8.63□□□□□ -1.03
COPS3-208ENST00000486032 PCDHGA4Q9Y5G9 962 aa8.63□□□□□ -1.03
COPS3-208ENST00000486032 KDM5CP41229 1560 aa8.62□□□□□ -1.03
COPS3-208ENST00000486032 FAM50AQ14320 339 aaKnown RBP8.62□□□□□ -1.03
COPS3-208ENST00000486032 EFCAB2Q5VUJ9 269 aa8.62□□□□□ -1.03
COPS3-208ENST00000486032 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
COPS3-208ENST00000486032 DIP2CQ9Y2E4 1556 aa8.61□□□□□ -1.03
COPS3-208ENST00000486032 ZFYVE16Q7Z3T8 1539 aa8.61□□□□□ -1.03
COPS3-208ENST00000486032 AFAP1Q8N556 730 aa8.61□□□□□ -1.03
COPS3-208ENST00000486032 ITGAEP38570 1179 aa8.6□□□□□ -1.03
COPS3-208ENST00000486032 FKBP8Q14318 412 aa8.6□□□□□ -1.03
COPS3-208ENST00000486032 MYOM3Q5VTT5 1437 aa8.6□□□□□ -1.03
COPS3-208ENST00000486032 KIDINS220Q9ULH0 1771 aa8.6□□□□□ -1.03
COPS3-208ENST00000486032 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
COPS3-208ENST00000486032 SLC34A2O95436 690 aa8.59□□□□□ -1.03
COPS3-208ENST00000486032 PSEN2P49810 448 aa8.59□□□□□ -1.03
COPS3-208ENST00000486032 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
COPS3-208ENST00000486032 HNRNPMP52272 730 aaKnown RBP eCLIP8.59□□□□□ -1.03
COPS3-208ENST00000486032 PHF8Q9UPP1 1060 aa8.59□□□□□ -1.03
COPS3-208ENST00000486032 HECW2Q9P2P5 1572 aa8.59□□□□□ -1.03
COPS3-208ENST00000486032 ADAMTSL3P82987 1691 aa8.59□□□□□ -1.03
COPS3-208ENST00000486032 CAMSAP2Q08AD1 1489 aa8.58□□□□□ -1.04
COPS3-208ENST00000486032 MBD5Q9P267 1494 aa8.58□□□□□ -1.04
COPS3-208ENST00000486032 BCORL1Q5H9F3 1711 aa8.58□□□□□ -1.04
COPS3-208ENST00000486032 INO80Q9ULG1 1556 aaPredicted RBP8.58□□□□□ -1.04
COPS3-208ENST00000486032 FGD6Q6ZV73 1430 aa8.57□□□□□ -1.04
COPS3-208ENST00000486032 PTPN23Q9H3S7 1636 aa8.57□□□□□ -1.04
COPS3-208ENST00000486032 ZNF518AQ6AHZ1 1483 aa8.57□□□□□ -1.04
COPS3-208ENST00000486032 RIMS1Q86UR5 1692 aaKnown RBP8.56□□□□□ -1.04
COPS3-208ENST00000486032 MIA2Q96PC5 1412 aa8.55□□□□□ -1.04
COPS3-208ENST00000486032 KIF3CO14782 793 aa8.55□□□□□ -1.04
COPS3-208ENST00000486032 ADGBQ8N7X0 1667 aa8.55□□□□□ -1.04
COPS3-208ENST00000486032 ATP7AQ04656 1500 aa8.54□□□□□ -1.04
COPS3-208ENST00000486032 MLH3Q9UHC1 1453 aa8.54□□□□□ -1.04
COPS3-208ENST00000486032 C2orf72A6NCS6 295 aa8.54□□□□□ -1.04
COPS3-208ENST00000486032 MLECQ14165 292 aa8.54□□□□□ -1.04
COPS3-208ENST00000486032 CHIC2Q9UKJ5 165 aa8.54□□□□□ -1.04
COPS3-208ENST00000486032 ATP10AO60312 1499 aa8.53□□□□□ -1.04
COPS3-208ENST00000486032 PLEKHH2Q8IVE3 1493 aa8.53□□□□□ -1.04
COPS3-208ENST00000486032 TSPY4P0CV99 314 aa8.53□□□□□ -1.04
COPS3-208ENST00000486032 TSPY10P0CW01 314 aa8.53□□□□□ -1.04
COPS3-208ENST00000486032 C9orf84Q5VXU9 1444 aa8.53□□□□□ -1.04
COPS3-208ENST00000486032 MAGI2Q86UL8 1455 aa8.52□□□□□ -1.05
COPS3-208ENST00000486032 KIAA1107Q9UPP5 1409 aa8.52□□□□□ -1.05
COPS3-208ENST00000486032 PLXNC1O60486 1568 aa8.52□□□□□ -1.05
COPS3-208ENST00000486032 SPAG9O60271 1321 aaKnown RBP8.52□□□□□ -1.05
COPS3-208ENST00000486032 TCOF1Q13428 1488 aaKnown RBP8.51□□□□□ -1.05
COPS3-208ENST00000486032 FER1L4A9Z1Z3 1794 aa8.51□□□□□ -1.05
COPS3-208ENST00000486032 CROCC2H7BZ55 1655 aa8.51□□□□□ -1.05
COPS3-208ENST00000486032 SPOCK2Q92563 424 aa8.51□□□□□ -1.05
COPS3-208ENST00000486032 RRBP1Q9P2E9 1410 aaKnown RBP8.51□□□□□ -1.05
COPS3-208ENST00000486032 ARHGEF5Q12774 1597 aa8.51□□□□□ -1.05
COPS3-208ENST00000486032 REREQ9P2R6 1566 aa8.51□□□□□ -1.05
COPS3-208ENST00000486032 ARID4BQ4LE39 1312 aaPredicted RBP8.51□□□□□ -1.05
COPS3-208ENST00000486032 PTPRMP28827 1452 aa8.51□□□□□ -1.05
COPS3-208ENST00000486032 CCDC141Q6ZP82 1450 aa8.51□□□□□ -1.05
COPS3-208ENST00000486032 ABCC5O15440 1437 aa8.49□□□□□ -1.05
COPS3-208ENST00000486032 DAPK1P53355 1430 aa8.49□□□□□ -1.05
COPS3-208ENST00000486032 LAPTM4AQ15012 233 aa8.49□□□□□ -1.05
COPS3-208ENST00000486032 RSPH4AQ5TD94 716 aa8.49□□□□□ -1.05
COPS3-208ENST00000486032 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
COPS3-208ENST00000486032 THSD4Q6ZMP0 1018 aa8.49□□□□□ -1.05
COPS3-208ENST00000486032 RRP7BPQ9NSQ0 103 aa8.49□□□□□ -1.05
COPS3-208ENST00000486032 PTPRKQ15262 1439 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms