RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
CBWD3-206ENST00000478048 E9PCH4 1651 aa16.97■□□□□ 0.31
CBWD3-206ENST00000478048 ARHGAP31Q2M1Z3 1444 aa16.97■□□□□ 0.31
CBWD3-206ENST00000478048 PKD2Q13563 968 aa16.96■□□□□ 0.31
CBWD3-206ENST00000478048 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
CBWD3-206ENST00000478048 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.3
CBWD3-206ENST00000478048 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
CBWD3-206ENST00000478048 PREX1Q8TCU6 1659 aa16.93■□□□□ 0.3
CBWD3-206ENST00000478048 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
CBWD3-206ENST00000478048 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
CBWD3-206ENST00000478048 SPATA31D1Q6ZQQ2 1576 aa16.91■□□□□ 0.3
CBWD3-206ENST00000478048 NOS1P29475 1434 aa16.9■□□□□ 0.3
CBWD3-206ENST00000478048 SETD1BQ9UPS6 1966 aaKnown RBP16.9■□□□□ 0.3
CBWD3-206ENST00000478048 SYNMO15061 1565 aa16.89■□□□□ 0.29
CBWD3-206ENST00000478048 TNRQ92752 1358 aa16.88■□□□□ 0.29
CBWD3-206ENST00000478048 DHX57Q6P158 1386 aaKnown RBP16.87■□□□□ 0.29
CBWD3-206ENST00000478048 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
CBWD3-206ENST00000478048 SPHKAPQ2M3C7 1700 aa16.87■□□□□ 0.29
CBWD3-206ENST00000478048 PTPRTO14522 1441 aa16.86■□□□□ 0.29
CBWD3-206ENST00000478048 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
CBWD3-206ENST00000478048 MYO3AQ8NEV4 1616 aa16.84■□□□□ 0.29
CBWD3-206ENST00000478048 IDI1Q13907 227 aa16.84■□□□□ 0.29
CBWD3-206ENST00000478048 TRPM2O94759 1503 aa16.83■□□□□ 0.28
CBWD3-206ENST00000478048 SPDYE4A6NLX3 237 aa16.82■□□□□ 0.28
CBWD3-206ENST00000478048 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
CBWD3-206ENST00000478048 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
CBWD3-206ENST00000478048 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
CBWD3-206ENST00000478048 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
CBWD3-206ENST00000478048 UHRF1BP1Q6BDS2 1440 aa16.8■□□□□ 0.28
CBWD3-206ENST00000478048 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
CBWD3-206ENST00000478048 SLC52A1Q9NWF4 448 aa16.8■□□□□ 0.28
CBWD3-206ENST00000478048 CEP170BQ9Y4F5 1589 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-206ENST00000478048 A2ML1A8K2U0 1454 aa16.78■□□□□ 0.28
CBWD3-206ENST00000478048 LMTK3Q96Q04 1460 aa16.78■□□□□ 0.28
CBWD3-206ENST00000478048 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-206ENST00000478048 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
CBWD3-206ENST00000478048 FARP1Q9Y4F1 1045 aaPredicted RBP16.76■□□□□ 0.27
CBWD3-206ENST00000478048 MYO5BQ9ULV0 1848 aa16.76■□□□□ 0.27
CBWD3-206ENST00000478048 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
CBWD3-206ENST00000478048 UBR1Q8IWV7 1749 aa16.76■□□□□ 0.27
CBWD3-206ENST00000478048 HSPA2P54652 639 aa16.75■□□□□ 0.27
CBWD3-206ENST00000478048 TMEM131LA2VDJ0 1609 aa16.74■□□□□ 0.27
CBWD3-206ENST00000478048 ADGRB3O60242 1522 aa16.73■□□□□ 0.27
CBWD3-206ENST00000478048 KIF1BO60333 1816 aa16.73■□□□□ 0.27
CBWD3-206ENST00000478048 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
CBWD3-206ENST00000478048 THEMISQ8N1K5 641 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-206ENST00000478048 KDM5AP29375 1690 aaKnown RBP16.7■□□□□ 0.26
CBWD3-206ENST00000478048 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-206ENST00000478048 SPATA31E1Q6ZUB1 1445 aa16.69■□□□□ 0.26
CBWD3-206ENST00000478048 GABBR2O75899 941 aa16.68■□□□□ 0.26
CBWD3-206ENST00000478048 NEUROD1Q13562 356 aa16.68■□□□□ 0.26
CBWD3-206ENST00000478048 RGL3Q3MIN7 710 aa16.68■□□□□ 0.26
CBWD3-206ENST00000478048 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
CBWD3-206ENST00000478048 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
CBWD3-206ENST00000478048 CD44P16070 742 aaKnown RBP16.66■□□□□ 0.26
CBWD3-206ENST00000478048 ARHGAP23Q9P227 1491 aa16.66■□□□□ 0.26
CBWD3-206ENST00000478048 SLIT1O75093 1534 aa16.65■□□□□ 0.26
CBWD3-206ENST00000478048 LTKP29376 864 aa16.65■□□□□ 0.26
CBWD3-206ENST00000478048 NUTM2DQ5VT03 806 aaPredicted RBP16.65■□□□□ 0.26
CBWD3-206ENST00000478048 ZFYVE9O95405 1425 aa16.64■□□□□ 0.25
CBWD3-206ENST00000478048 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
CBWD3-206ENST00000478048 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
CBWD3-206ENST00000478048 NEURL4Q96JN8 1562 aa16.63■□□□□ 0.25
CBWD3-206ENST00000478048 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
CBWD3-206ENST00000478048 STRCQ7RTU9 1775 aa16.62■□□□□ 0.25
CBWD3-206ENST00000478048 TXNDC2Q86VQ3 553 aa16.62■□□□□ 0.25
CBWD3-206ENST00000478048 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
CBWD3-206ENST00000478048 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
CBWD3-206ENST00000478048 PPLO60437 1756 aa16.61■□□□□ 0.25
CBWD3-206ENST00000478048 CREBZFQ9NS37 354 aa16.6■□□□□ 0.25
CBWD3-206ENST00000478048 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
CBWD3-206ENST00000478048 SCAF11Q99590 1463 aaKnown RBP16.6■□□□□ 0.25
CBWD3-206ENST00000478048 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
CBWD3-206ENST00000478048 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
CBWD3-206ENST00000478048 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
CBWD3-206ENST00000478048 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-206ENST00000478048 CLCN6P51797 869 aa16.58■□□□□ 0.24
CBWD3-206ENST00000478048 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
CBWD3-206ENST00000478048 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
CBWD3-206ENST00000478048 L3MBTL2Q969R5 705 aa16.57■□□□□ 0.24
CBWD3-206ENST00000478048 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
CBWD3-206ENST00000478048 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
CBWD3-206ENST00000478048 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
CBWD3-206ENST00000478048 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-206ENST00000478048 MED14O60244 1454 aa16.55■□□□□ 0.24
CBWD3-206ENST00000478048 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
CBWD3-206ENST00000478048 TONSLQ96HA7 1378 aa16.54■□□□□ 0.24
CBWD3-206ENST00000478048 PLEKHG1Q9ULL1 1385 aa16.54■□□□□ 0.24
CBWD3-206ENST00000478048 IQGAP1P46940 1657 aa16.52■□□□□ 0.24
CBWD3-206ENST00000478048 MYOM2P54296 1465 aa16.52■□□□□ 0.24
CBWD3-206ENST00000478048 BCANQ96GW7 911 aa16.52■□□□□ 0.24
CBWD3-206ENST00000478048 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.23
CBWD3-206ENST00000478048 SLC26A8Q96RN1 970 aa16.51■□□□□ 0.23
CBWD3-206ENST00000478048 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
CBWD3-206ENST00000478048 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
CBWD3-206ENST00000478048 SETBP1Q9Y6X0 1596 aa16.49■□□□□ 0.23
CBWD3-206ENST00000478048 PIK3C2GO75747 1445 aa16.49■□□□□ 0.23
CBWD3-206ENST00000478048 STAC3Q96MF2 364 aa16.47■□□□□ 0.23
CBWD3-206ENST00000478048 PRAG1Q86YV5 1406 aa16.47■□□□□ 0.23
CBWD3-206ENST00000478048 ALKQ9UM73 1620 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms