RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CNTLNQ9NXG0 1405 aa7.43□□□□□ -1.22
GTF3C3-208ENST00000455546 NCOA2Q15596 1464 aa7.43□□□□□ -1.22
GTF3C3-208ENST00000455546 EHBP1L1Q8N3D4 1523 aa7.42□□□□□ -1.22
GTF3C3-208ENST00000455546 INO80Q9ULG1 1556 aaPredicted RBP7.42□□□□□ -1.22
GTF3C3-208ENST00000455546 ADGBQ8N7X0 1667 aa7.41□□□□□ -1.22
GTF3C3-208ENST00000455546 BCANQ96GW7 911 aa7.41□□□□□ -1.22
GTF3C3-208ENST00000455546 CABP2Q9NPB3 220 aa7.41□□□□□ -1.22
GTF3C3-208ENST00000455546 DHX29Q7Z478 1369 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-208ENST00000455546 CAMSAP1Q5T5Y3 1602 aa7.41□□□□□ -1.22
GTF3C3-208ENST00000455546 TSPY4P0CV99 314 aa7.4□□□□□ -1.22
GTF3C3-208ENST00000455546 TSPY10P0CW01 314 aa7.4□□□□□ -1.22
GTF3C3-208ENST00000455546 RSPH4AQ5TD94 716 aa7.4□□□□□ -1.22
GTF3C3-208ENST00000455546 PTPRKQ15262 1439 aa7.4□□□□□ -1.22
GTF3C3-208ENST00000455546 PLXNC1O60486 1568 aa7.4□□□□□ -1.22
GTF3C3-208ENST00000455546 MROH2AA6NES4 1674 aa7.4□□□□□ -1.23
GTF3C3-208ENST00000455546 CAMSAP2Q08AD1 1489 aa7.39□□□□□ -1.23
GTF3C3-208ENST00000455546 RTEL1-TNFRSF6BF6WH68 1400 aa7.39□□□□□ -1.23
GTF3C3-208ENST00000455546 PTPRTO14522 1441 aa7.39□□□□□ -1.23
GTF3C3-208ENST00000455546 NPATQ14207 1427 aa7.39□□□□□ -1.23
GTF3C3-208ENST00000455546 NCOA1Q15788 1441 aa7.39□□□□□ -1.23
GTF3C3-208ENST00000455546 WASHC2CQ9Y4E1 1318 aa7.39□□□□□ -1.23
GTF3C3-208ENST00000455546 TRPC6Q9Y210 931 aa7.39□□□□□ -1.23
GTF3C3-208ENST00000455546 LRRC9Q6ZRR7 1453 aa7.38□□□□□ -1.23
GTF3C3-208ENST00000455546 VPS8Q8N3P4 1428 aa7.38□□□□□ -1.23
GTF3C3-208ENST00000455546 ZNF335Q9H4Z2 1342 aaPredicted RBP7.38□□□□□ -1.23
GTF3C3-208ENST00000455546 EFCAB3Q8N7B9 438 aa7.38□□□□□ -1.23
GTF3C3-208ENST00000455546 MS4A3Q96HJ5 214 aa7.38□□□□□ -1.23
GTF3C3-208ENST00000455546 MFRPQ9BY79 579 aa7.38□□□□□ -1.23
GTF3C3-208ENST00000455546 LTBP4Q8N2S1 1624 aa7.38□□□□□ -1.23
GTF3C3-208ENST00000455546 CCDC141Q6ZP82 1450 aa7.37□□□□□ -1.23
GTF3C3-208ENST00000455546 C19orf67A6NJJ6 358 aa7.37□□□□□ -1.23
GTF3C3-208ENST00000455546 RYDENQ9NUL5 291 aaKnown RBP7.36□□□□□ -1.23
GTF3C3-208ENST00000455546 MYO3AQ8NEV4 1616 aa7.36□□□□□ -1.23
GTF3C3-208ENST00000455546 CEP170BQ9Y4F5 1589 aaPredicted RBP7.36□□□□□ -1.23
GTF3C3-208ENST00000455546 RRP7BPQ9NSQ0 103 aa7.35□□□□□ -1.23
GTF3C3-208ENST00000455546 PHF8Q9UPP1 1060 aa7.35□□□□□ -1.23
GTF3C3-208ENST00000455546 DNMT1P26358 1616 aaKnown RBP7.34□□□□□ -1.23
GTF3C3-208ENST00000455546 TNRQ92752 1358 aa7.34□□□□□ -1.23
GTF3C3-208ENST00000455546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.34□□□□□ -1.23
GTF3C3-208ENST00000455546 ARHGEF5Q12774 1597 aa7.34□□□□□ -1.23
GTF3C3-208ENST00000455546 CADPS2Q86UW7 1296 aa7.34□□□□□ -1.23
GTF3C3-208ENST00000455546 TMEM106CQ9BVX2 250 aa7.34□□□□□ -1.23
GTF3C3-208ENST00000455546 CHIC2Q9UKJ5 165 aa7.34□□□□□ -1.23
GTF3C3-208ENST00000455546 ZNF142P52746 1687 aaPredicted RBP7.34□□□□□ -1.23
GTF3C3-208ENST00000455546 A2ML1A8K2U0 1454 aa7.33□□□□□ -1.24
GTF3C3-208ENST00000455546 UBAP1LF5GYI3 381 aa7.33□□□□□ -1.24
GTF3C3-208ENST00000455546 PPP1R37O75864 691 aa7.33□□□□□ -1.24
GTF3C3-208ENST00000455546 ILDR2Q71H61 639 aa7.33□□□□□ -1.24
GTF3C3-208ENST00000455546 ANKLE2Q86XL3 938 aa7.33□□□□□ -1.24
GTF3C3-208ENST00000455546 THEMISQ8N1K5 641 aaPredicted RBP7.33□□□□□ -1.24
GTF3C3-208ENST00000455546 MYOM3Q5VTT5 1437 aa7.33□□□□□ -1.24
GTF3C3-208ENST00000455546 MIA2Q96PC5 1412 aa7.33□□□□□ -1.24
GTF3C3-208ENST00000455546 TCOF1Q13428 1488 aaKnown RBP7.32□□□□□ -1.24
GTF3C3-208ENST00000455546 DISP3Q9P2K9 1392 aa7.32□□□□□ -1.24
GTF3C3-208ENST00000455546 MAP3K1Q13233 1512 aa7.32□□□□□ -1.24
GTF3C3-208ENST00000455546 KDM5DQ9BY66 1539 aa7.32□□□□□ -1.24
GTF3C3-208ENST00000455546 PZPP20742 1482 aa7.31□□□□□ -1.24
GTF3C3-208ENST00000455546 PLA2R1Q13018 1463 aa7.31□□□□□ -1.24
GTF3C3-208ENST00000455546 HAX1O00165 279 aa7.31□□□□□ -1.24
GTF3C3-208ENST00000455546 ABCC5O15440 1437 aa7.31□□□□□ -1.24
GTF3C3-208ENST00000455546 CEP152O94986 1710 aa7.31□□□□□ -1.24
GTF3C3-208ENST00000455546 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
GTF3C3-208ENST00000455546 PIP4K2BP78356 416 aa7.31□□□□□ -1.24
GTF3C3-208ENST00000455546 EVX2Q03828 476 aa7.31□□□□□ -1.24
GTF3C3-208ENST00000455546 POLR1AO95602 1720 aaPredicted RBP7.3□□□□□ -1.24
GTF3C3-208ENST00000455546 MAST1Q9Y2H9 1570 aa7.3□□□□□ -1.24
GTF3C3-208ENST00000455546 GALR2O43603 387 aaPredicted RBP7.3□□□□□ -1.24
GTF3C3-208ENST00000455546 NLRP6P59044 892 aa7.3□□□□□ -1.24
GTF3C3-208ENST00000455546 GOLGA2Q08379 1002 aa7.3□□□□□ -1.24
GTF3C3-208ENST00000455546 FBXO22Q8NEZ5 403 aa7.3□□□□□ -1.24
GTF3C3-208ENST00000455546 PTPN23Q9H3S7 1636 aa7.3□□□□□ -1.24
GTF3C3-208ENST00000455546 UGGT1Q9NYU2 1555 aa7.29□□□□□ -1.24
GTF3C3-208ENST00000455546 ABCC3O15438 1527 aa7.29□□□□□ -1.24
GTF3C3-208ENST00000455546 FAM50AQ14320 339 aaKnown RBP7.29□□□□□ -1.24
GTF3C3-208ENST00000455546 PPARGC1BQ86YN6 1023 aaKnown RBP7.29□□□□□ -1.24
GTF3C3-208ENST00000455546 NEURL4Q96JN8 1562 aa7.29□□□□□ -1.24
GTF3C3-208ENST00000455546 MROH1Q8NDA8 1641 aa7.28□□□□□ -1.24
GTF3C3-208ENST00000455546 RNF17Q9BXT8 1623 aaKnown RBP7.28□□□□□ -1.24
GTF3C3-208ENST00000455546 SOX12O15370 315 aa7.28□□□□□ -1.24
GTF3C3-208ENST00000455546 LTKP29376 864 aa7.28□□□□□ -1.24
GTF3C3-208ENST00000455546 NBR1Q14596 966 aa7.28□□□□□ -1.24
GTF3C3-208ENST00000455546 TXNDC2Q86VQ3 553 aa7.28□□□□□ -1.24
GTF3C3-208ENST00000455546 KIF15Q9NS87 1388 aa7.28□□□□□ -1.24
GTF3C3-208ENST00000455546 NPHP4O75161 1426 aaPredicted RBP7.27□□□□□ -1.24
GTF3C3-208ENST00000455546 DAPK1P53355 1430 aa7.27□□□□□ -1.24
GTF3C3-208ENST00000455546 DUOX2Q9NRD8 1548 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 FAM135AQ9P2D6 1515 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 HSPA1LP34931 641 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 MS4A4AQ96JQ5 239 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 ERVK-7P63135 1459 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 IQSEC2Q5JU85 1478 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 NLRP1Q9C000 1473 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 SHANK2Q9UPX8 1470 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 STRCP1A6NGW2 1772 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 EIF2AK4Q9P2K8 1649 aaKnown RBP7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 FGD6Q6ZV73 1430 aa7.27□□□□□ -1.25
GTF3C3-208ENST00000455546 CROCC2H7BZ55 1655 aa7.26□□□□□ -1.25
GTF3C3-208ENST00000455546 SPATA31D1Q6ZQQ2 1576 aa7.26□□□□□ -1.25
GTF3C3-208ENST00000455546 TTLL13PA6NNM8 815 aa7.26□□□□□ -1.25
GTF3C3-208ENST00000455546 TOM1O60784 492 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms