RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
LINC01271-201ENST00000441214 TET3O43151 1660 aa18.51■□□□□ 0.55
LINC01271-201ENST00000441214 ZNF326Q5BKZ1 582 aaKnown RBP18.51■□□□□ 0.55
LINC01271-201ENST00000441214 UGGT1Q9NYU2 1555 aa18.5■□□□□ 0.55
LINC01271-201ENST00000441214 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
LINC01271-201ENST00000441214 ABCC3O15438 1527 aa18.5■□□□□ 0.55
LINC01271-201ENST00000441214 CCDC144AA2RUR9 1427 aa18.48■□□□□ 0.55
LINC01271-201ENST00000441214 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
LINC01271-201ENST00000441214 BCORL1Q5H9F3 1711 aa18.48■□□□□ 0.55
LINC01271-201ENST00000441214 EFCAB6Q5THR3 1501 aa18.48■□□□□ 0.55
LINC01271-201ENST00000441214 NPATQ14207 1427 aa18.47■□□□□ 0.55
LINC01271-201ENST00000441214 FBXO31Q5XUX0 539 aaPredicted RBP18.47■□□□□ 0.55
LINC01271-201ENST00000441214 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
LINC01271-201ENST00000441214 CLTCQ00610 1675 aaKnown RBP18.45■□□□□ 0.54
LINC01271-201ENST00000441214 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
LINC01271-201ENST00000441214 CHGAP10645 457 aaKnown RBP18.44■□□□□ 0.54
LINC01271-201ENST00000441214 SPHKAPQ2M3C7 1700 aa18.44■□□□□ 0.54
LINC01271-201ENST00000441214 HSP90AA1P07900 732 aaKnown RBP18.44■□□□□ 0.54
LINC01271-201ENST00000441214 REREQ9P2R6 1566 aa18.44■□□□□ 0.54
LINC01271-201ENST00000441214 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
LINC01271-201ENST00000441214 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
LINC01271-201ENST00000441214 AGLP35573 1532 aa18.43■□□□□ 0.54
LINC01271-201ENST00000441214 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
LINC01271-201ENST00000441214 DCAF11Q8TEB1 546 aa18.42■□□□□ 0.54
LINC01271-201ENST00000441214 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
LINC01271-201ENST00000441214 LMTK2Q8IWU2 1503 aa18.41■□□□□ 0.54
LINC01271-201ENST00000441214 CEBPAP49715 358 aaPredicted RBP18.4■□□□□ 0.54
LINC01271-201ENST00000441214 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.54
LINC01271-201ENST00000441214 TRPM2O94759 1503 aa18.38■□□□□ 0.53
LINC01271-201ENST00000441214 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
LINC01271-201ENST00000441214 CALD1Q05682 793 aaKnown RBP18.38■□□□□ 0.53
LINC01271-201ENST00000441214 PTPRTO14522 1441 aa18.37■□□□□ 0.53
LINC01271-201ENST00000441214 ZC3H13Q5T200 1668 aaKnown RBP18.36■□□□□ 0.53
LINC01271-201ENST00000441214 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
LINC01271-201ENST00000441214 NUTM2DQ5VT03 806 aaPredicted RBP18.36■□□□□ 0.53
LINC01271-201ENST00000441214 ARXQ96QS3 562 aa18.34■□□□□ 0.53
LINC01271-201ENST00000441214 SYNMO15061 1565 aa18.34■□□□□ 0.53
LINC01271-201ENST00000441214 IRX6P78412 446 aaPredicted RBP18.34■□□□□ 0.53
LINC01271-201ENST00000441214 ZMYM3Q14202 1370 aa18.33■□□□□ 0.53
LINC01271-201ENST00000441214 IDI1Q13907 227 aa18.33■□□□□ 0.52
LINC01271-201ENST00000441214 PREX1Q8TCU6 1659 aa18.32■□□□□ 0.52
LINC01271-201ENST00000441214 PRDM4Q9UKN5 801 aa18.32■□□□□ 0.52
LINC01271-201ENST00000441214 MROH2AA6NES4 1674 aa18.31■□□□□ 0.52
LINC01271-201ENST00000441214 ANP32CO43423 234 aa18.3■□□□□ 0.52
LINC01271-201ENST00000441214 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
LINC01271-201ENST00000441214 NOS1P29475 1434 aa18.3■□□□□ 0.52
LINC01271-201ENST00000441214 SPATA31E1Q6ZUB1 1445 aa18.3■□□□□ 0.52
LINC01271-201ENST00000441214 ARHGAP31Q2M1Z3 1444 aa18.29■□□□□ 0.52
LINC01271-201ENST00000441214 B4GALNT3Q6L9W6 998 aa18.29■□□□□ 0.52
LINC01271-201ENST00000441214 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
LINC01271-201ENST00000441214 FER1L4A9Z1Z3 1794 aa18.28■□□□□ 0.52
LINC01271-201ENST00000441214 ERVK-7P63135 1459 aa18.28■□□□□ 0.52
LINC01271-201ENST00000441214 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
LINC01271-201ENST00000441214 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
LINC01271-201ENST00000441214 KIF1BO60333 1816 aa18.28■□□□□ 0.52
LINC01271-201ENST00000441214 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
LINC01271-201ENST00000441214 DDX10Q13206 875 aaKnown RBP18.26■□□□□ 0.51
LINC01271-201ENST00000441214 MYO5BQ9ULV0 1848 aa18.26■□□□□ 0.51
LINC01271-201ENST00000441214 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
LINC01271-201ENST00000441214 MADDQ8WXG6 1647 aa18.25■□□□□ 0.51
LINC01271-201ENST00000441214 NBPF1Q3BBV0 1214 aa18.24■□□□□ 0.51
LINC01271-201ENST00000441214 RIMS1Q86UR5 1692 aaKnown RBP18.23■□□□□ 0.51
LINC01271-201ENST00000441214 NAP1L5Q96NT1 182 aaPredicted RBP18.23■□□□□ 0.51
LINC01271-201ENST00000441214 PDCL3Q9H2J4 239 aa18.23■□□□□ 0.51
LINC01271-201ENST00000441214 ADGRF5Q8IZF2 1346 aa18.22■□□□□ 0.51
LINC01271-201ENST00000441214 C3P01024 1663 aa18.22■□□□□ 0.51
LINC01271-201ENST00000441214 PIK3C2BO00750 1634 aa18.21■□□□□ 0.51
LINC01271-201ENST00000441214 ADGRB3O60242 1522 aa18.2■□□□□ 0.5
LINC01271-201ENST00000441214 RRAGDQ9NQL2 400 aaPredicted RBP18.2■□□□□ 0.5
LINC01271-201ENST00000441214 PRAG1Q86YV5 1406 aa18.2■□□□□ 0.5
LINC01271-201ENST00000441214 SLC52A1Q9NWF4 448 aa18.2■□□□□ 0.5
LINC01271-201ENST00000441214 SPATA31D1Q6ZQQ2 1576 aa18.19■□□□□ 0.5
LINC01271-201ENST00000441214 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
LINC01271-201ENST00000441214 HSPA5P11021 654 aaKnown RBP18.19■□□□□ 0.5
LINC01271-201ENST00000441214 TNRQ92752 1358 aa18.18■□□□□ 0.5
LINC01271-201ENST00000441214 NFKBIBQ15653 356 aa18.18■□□□□ 0.5
LINC01271-201ENST00000441214 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
LINC01271-201ENST00000441214 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
LINC01271-201ENST00000441214 HNRNPUQ00839 825 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC01271-201ENST00000441214 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
LINC01271-201ENST00000441214 NAP1L2Q9ULW6 460 aaPredicted RBP18.16■□□□□ 0.5
LINC01271-201ENST00000441214 TMEM131LA2VDJ0 1609 aa18.16■□□□□ 0.5
LINC01271-201ENST00000441214 CLCN1P35523 988 aa18.15■□□□□ 0.5
LINC01271-201ENST00000441214 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
LINC01271-201ENST00000441214 UHRF1BP1Q6BDS2 1440 aa18.15■□□□□ 0.5
LINC01271-201ENST00000441214 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
LINC01271-201ENST00000441214 EIF4G2P78344 907 aaKnown RBP eCLIP18.13■□□□□ 0.49
LINC01271-201ENST00000441214 TRPM1Q7Z4N2 1603 aa18.13■□□□□ 0.49
LINC01271-201ENST00000441214 PPLO60437 1756 aa18.12■□□□□ 0.49
LINC01271-201ENST00000441214 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
LINC01271-201ENST00000441214 RALGAPBQ86X10 1494 aa18.12■□□□□ 0.49
LINC01271-201ENST00000441214 BBXQ8WY36 941 aaPredicted RBP18.11■□□□□ 0.49
LINC01271-201ENST00000441214 NEXMIFQ5QGS0 1516 aa18.11■□□□□ 0.49
LINC01271-201ENST00000441214 NCLP19338 710 aaKnown RBP18.11■□□□□ 0.49
LINC01271-201ENST00000441214 TMEM132EQ6IEE7 984 aa18.11■□□□□ 0.49
LINC01271-201ENST00000441214 USP47Q96K76 1375 aa18.11■□□□□ 0.49
LINC01271-201ENST00000441214 A2ML1A8K2U0 1454 aa18.1■□□□□ 0.49
LINC01271-201ENST00000441214 RGS3P49796 1198 aa18.1■□□□□ 0.49
LINC01271-201ENST00000441214 IPO4Q8TEX9 1081 aaKnown RBP18.1■□□□□ 0.49
LINC01271-201ENST00000441214 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms