RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 PTPRKQ15262 1439 aa11.27□□□□□ -0.6
TOP3B-208ENST00000437929 PIP4K2BP78356 416 aa11.27□□□□□ -0.61
TOP3B-208ENST00000437929 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
TOP3B-208ENST00000437929 MED1Q15648 1581 aaPredicted RBP11.27□□□□□ -0.61
TOP3B-208ENST00000437929 INO80Q9ULG1 1556 aaPredicted RBP11.26□□□□□ -0.61
TOP3B-208ENST00000437929 GTPBP6O43824 516 aaPredicted RBP11.26□□□□□ -0.61
TOP3B-208ENST00000437929 HSPA1LP34931 641 aa11.26□□□□□ -0.61
TOP3B-208ENST00000437929 A2MP01023 1474 aa11.25□□□□□ -0.61
TOP3B-208ENST00000437929 GPATCH8Q9UKJ3 1502 aaKnown RBP11.25□□□□□ -0.61
TOP3B-208ENST00000437929 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
TOP3B-208ENST00000437929 KDM2AQ9Y2K7 1162 aa11.23□□□□□ -0.61
TOP3B-208ENST00000437929 DNMT1P26358 1616 aaKnown RBP11.23□□□□□ -0.61
TOP3B-208ENST00000437929 A2ML1A8K2U0 1454 aa11.22□□□□□ -0.61
TOP3B-208ENST00000437929 FYCO1Q9BQS8 1478 aa11.22□□□□□ -0.61
TOP3B-208ENST00000437929 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
TOP3B-208ENST00000437929 CFDP1Q9UEE9 299 aaPredicted RBP11.22□□□□□ -0.61
TOP3B-208ENST00000437929 POLR1AO95602 1720 aaPredicted RBP11.21□□□□□ -0.62
TOP3B-208ENST00000437929 NEURL4Q96JN8 1562 aa11.2□□□□□ -0.62
TOP3B-208ENST00000437929 KIAA1107Q9UPP5 1409 aa11.2□□□□□ -0.62
TOP3B-208ENST00000437929 CCNB3Q8WWL7 1395 aa11.2□□□□□ -0.62
TOP3B-208ENST00000437929 TOM1O60784 492 aa11.2□□□□□ -0.62
TOP3B-208ENST00000437929 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
TOP3B-208ENST00000437929 PLEKHH2Q8IVE3 1493 aa11.19□□□□□ -0.62
TOP3B-208ENST00000437929 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-208ENST00000437929 HAX1O00165 279 aa11.19□□□□□ -0.62
TOP3B-208ENST00000437929 FBXO31Q5XUX0 539 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-208ENST00000437929 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
TOP3B-208ENST00000437929 CPS1P31327 1500 aa11.19□□□□□ -0.62
TOP3B-208ENST00000437929 SHANK2Q9UPX8 1470 aa11.19□□□□□ -0.62
TOP3B-208ENST00000437929 MS4A3Q96HJ5 214 aa11.18□□□□□ -0.62
TOP3B-208ENST00000437929 TNRQ92752 1358 aa11.17□□□□□ -0.62
TOP3B-208ENST00000437929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
TOP3B-208ENST00000437929 ALKQ9UM73 1620 aa11.16□□□□□ -0.62
TOP3B-208ENST00000437929 VWDEQ8N2E2 1590 aa11.16□□□□□ -0.62
TOP3B-208ENST00000437929 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
TOP3B-208ENST00000437929 KIF3BO15066 747 aa11.15□□□□□ -0.62
TOP3B-208ENST00000437929 EFCAB3Q8N7B9 438 aa11.15□□□□□ -0.62
TOP3B-208ENST00000437929 TIAM1Q13009 1591 aa11.15□□□□□ -0.62
TOP3B-208ENST00000437929 PZPP20742 1482 aa11.14□□□□□ -0.63
TOP3B-208ENST00000437929 MBD5Q9P267 1494 aa11.14□□□□□ -0.63
TOP3B-208ENST00000437929 ANKLE2Q86XL3 938 aa11.14□□□□□ -0.63
TOP3B-208ENST00000437929 DHX29Q7Z478 1369 aaKnown RBP11.14□□□□□ -0.63
TOP3B-208ENST00000437929 KDM5DQ9BY66 1539 aa11.14□□□□□ -0.63
TOP3B-208ENST00000437929 NPHP4O75161 1426 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-208ENST00000437929 TMEM106CQ9BVX2 250 aa11.13□□□□□ -0.63
TOP3B-208ENST00000437929 UGGT1Q9NYU2 1555 aa11.12□□□□□ -0.63
TOP3B-208ENST00000437929 GOLGA2Q08379 1002 aa11.12□□□□□ -0.63
TOP3B-208ENST00000437929 MFRPQ9BY79 579 aa11.12□□□□□ -0.63
TOP3B-208ENST00000437929 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
TOP3B-208ENST00000437929 WASHC2CQ9Y4E1 1318 aa11.11□□□□□ -0.63
TOP3B-208ENST00000437929 RTEL1-TNFRSF6BF6WH68 1400 aa11.11□□□□□ -0.63
TOP3B-208ENST00000437929 STRCP1A6NGW2 1772 aa11.11□□□□□ -0.63
TOP3B-208ENST00000437929 THEMISQ8N1K5 641 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-208ENST00000437929 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
TOP3B-208ENST00000437929 MIA2Q96PC5 1412 aa11.1□□□□□ -0.63
TOP3B-208ENST00000437929 FAM135AQ9P2D6 1515 aa11.1□□□□□ -0.63
TOP3B-208ENST00000437929 EHBP1L1Q8N3D4 1523 aa11.09□□□□□ -0.63
TOP3B-208ENST00000437929 DEPDC5O75140 1603 aa11.09□□□□□ -0.63
TOP3B-208ENST00000437929 MED14O60244 1454 aa11.09□□□□□ -0.63
TOP3B-208ENST00000437929 CCDC141Q6ZP82 1450 aa11.09□□□□□ -0.63
TOP3B-208ENST00000437929 NLRP1Q9C000 1473 aa11.09□□□□□ -0.63
TOP3B-208ENST00000437929 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
TOP3B-208ENST00000437929 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
TOP3B-208ENST00000437929 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
TOP3B-208ENST00000437929 CAMSAP2Q08AD1 1489 aa11.07□□□□□ -0.64
TOP3B-208ENST00000437929 NLRP6P59044 892 aa11.07□□□□□ -0.64
TOP3B-208ENST00000437929 EVX2Q03828 476 aa11.07□□□□□ -0.64
TOP3B-208ENST00000437929 BCANQ96GW7 911 aa11.07□□□□□ -0.64
TOP3B-208ENST00000437929 SOX12O15370 315 aa11.06□□□□□ -0.64
TOP3B-208ENST00000437929 RGS17Q9UGC6 210 aaPredicted RBP11.06□□□□□ -0.64
TOP3B-208ENST00000437929 CEP162Q5TB80 1403 aa11.06□□□□□ -0.64
TOP3B-208ENST00000437929 SYNMO15061 1565 aa11.06□□□□□ -0.64
TOP3B-208ENST00000437929 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
TOP3B-208ENST00000437929 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
TOP3B-208ENST00000437929 ZC3H13Q5T200 1668 aaKnown RBP11.04□□□□□ -0.64
TOP3B-208ENST00000437929 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
TOP3B-208ENST00000437929 ABCC3O15438 1527 aa11.03□□□□□ -0.64
TOP3B-208ENST00000437929 ERVK-7P63135 1459 aa11.02□□□□□ -0.65
TOP3B-208ENST00000437929 TIE1P35590 1138 aa11.02□□□□□ -0.65
TOP3B-208ENST00000437929 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
TOP3B-208ENST00000437929 UBR1Q8IWV7 1749 aa11.01□□□□□ -0.65
TOP3B-208ENST00000437929 TTLL13PA6NNM8 815 aa11.01□□□□□ -0.65
TOP3B-208ENST00000437929 PPP1R37O75864 691 aa11.01□□□□□ -0.65
TOP3B-208ENST00000437929 TSPY4P0CV99 314 aa11.01□□□□□ -0.65
TOP3B-208ENST00000437929 TSPY10P0CW01 314 aa11.01□□□□□ -0.65
TOP3B-208ENST00000437929 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-208ENST00000437929 ARHGEF5Q12774 1597 aa11.01□□□□□ -0.65
TOP3B-208ENST00000437929 CEP152O94986 1710 aa11.01□□□□□ -0.65
TOP3B-208ENST00000437929 SCAF11Q99590 1463 aaKnown RBP11□□□□□ -0.65
TOP3B-208ENST00000437929 XIRP1Q702N8 1843 aaKnown RBP11□□□□□ -0.65
TOP3B-208ENST00000437929 CFAP65Q6ZU64 1925 aaKnown RBP11□□□□□ -0.65
TOP3B-208ENST00000437929 RSPH4AQ5TD94 716 aa11□□□□□ -0.65
TOP3B-208ENST00000437929 MROH1Q8NDA8 1641 aa10.99□□□□□ -0.65
TOP3B-208ENST00000437929 LTKP29376 864 aa10.99□□□□□ -0.65
TOP3B-208ENST00000437929 POTEAQ6S8J7 498 aa10.99□□□□□ -0.65
TOP3B-208ENST00000437929 CADPS2Q86UW7 1296 aa10.98□□□□□ -0.65
TOP3B-208ENST00000437929 TXNDC2Q86VQ3 553 aa10.98□□□□□ -0.65
TOP3B-208ENST00000437929 EIF2AK4Q9P2K8 1649 aaKnown RBP10.97□□□□□ -0.65
TOP3B-208ENST00000437929 SETD1AO15047 1707 aaKnown RBP10.96□□□□□ -0.65
TOP3B-208ENST00000437929 SLIT1O75093 1534 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms