RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-203ENST00000434667 RALBP1Q15311 655 aa13.72□□□□□ -0.21
SCAF4-203ENST00000434667 ERBINQ96RT1 1412 aa13.71□□□□□ -0.21
SCAF4-203ENST00000434667 SPRYD3Q8NCJ5 442 aa13.71□□□□□ -0.22
SCAF4-203ENST00000434667 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.22
SCAF4-203ENST00000434667 SLKQ9H2G2 1235 aaPredicted RBP13.7□□□□□ -0.22
SCAF4-203ENST00000434667 MS4A1P11836 297 aa13.7□□□□□ -0.22
SCAF4-203ENST00000434667 A2MP01023 1474 aa13.7□□□□□ -0.22
SCAF4-203ENST00000434667 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
SCAF4-203ENST00000434667 CLTCL1P53675 1640 aa13.69□□□□□ -0.22
SCAF4-203ENST00000434667 PER1O15534 1290 aaPredicted RBP13.69□□□□□ -0.22
SCAF4-203ENST00000434667 C8orf34Q49A92 452 aa13.69□□□□□ -0.22
SCAF4-203ENST00000434667 USP35Q9P2H5 1018 aa13.69□□□□□ -0.22
SCAF4-203ENST00000434667 PRAG1Q86YV5 1406 aa13.69□□□□□ -0.22
SCAF4-203ENST00000434667 KIDINS220Q9ULH0 1771 aa13.69□□□□□ -0.22
SCAF4-203ENST00000434667 SEC24BO95487 1268 aa13.68□□□□□ -0.22
SCAF4-203ENST00000434667 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
SCAF4-203ENST00000434667 PTPRTO14522 1441 aa13.68□□□□□ -0.22
SCAF4-203ENST00000434667 LMTK2Q8IWU2 1503 aa13.68□□□□□ -0.22
SCAF4-203ENST00000434667 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
SCAF4-203ENST00000434667 BCAR3O75815 825 aa13.68□□□□□ -0.22
SCAF4-203ENST00000434667 POGKQ9P215 609 aa13.68□□□□□ -0.22
SCAF4-203ENST00000434667 DISP3Q9P2K9 1392 aa13.67□□□□□ -0.22
SCAF4-203ENST00000434667 PIK3C2BO00750 1634 aa13.66□□□□□ -0.22
SCAF4-203ENST00000434667 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
SCAF4-203ENST00000434667 INSRP06213 1382 aa13.66□□□□□ -0.22
SCAF4-203ENST00000434667 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
SCAF4-203ENST00000434667 PLEKHH1Q9ULM0 1364 aa13.65□□□□□ -0.22
SCAF4-203ENST00000434667 COL17A1Q9UMD9 1497 aaPredicted RBP13.65□□□□□ -0.22
SCAF4-203ENST00000434667 PLEKHH2Q8IVE3 1493 aa13.65□□□□□ -0.22
SCAF4-203ENST00000434667 ANKRD30AQ9BXX3 1397 aa13.64□□□□□ -0.23
SCAF4-203ENST00000434667 FRMPD1Q5SYB0 1578 aa13.64□□□□□ -0.23
SCAF4-203ENST00000434667 PPRC1Q5VV67 1664 aaKnown RBP13.64□□□□□ -0.23
SCAF4-203ENST00000434667 ZNF518AQ6AHZ1 1483 aa13.64□□□□□ -0.23
SCAF4-203ENST00000434667 DMRT2Q9Y5R5 561 aa13.64□□□□□ -0.23
SCAF4-203ENST00000434667 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
SCAF4-203ENST00000434667 PLCH2O75038 1416 aa13.64□□□□□ -0.23
SCAF4-203ENST00000434667 KDM2BQ8NHM5 1336 aa13.64□□□□□ -0.23
SCAF4-203ENST00000434667 IGHDP01880 384 aa13.63□□□□□ -0.23
SCAF4-203ENST00000434667 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
SCAF4-203ENST00000434667 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
SCAF4-203ENST00000434667 CANXP27824 592 aaKnown RBP13.63□□□□□ -0.23
SCAF4-203ENST00000434667 PPLO60437 1756 aa13.63□□□□□ -0.23
SCAF4-203ENST00000434667 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
SCAF4-203ENST00000434667 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
SCAF4-203ENST00000434667 DUSP27Q5VZP5 1158 aa13.62□□□□□ -0.23
SCAF4-203ENST00000434667 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-203ENST00000434667 GZF1Q9H116 711 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-203ENST00000434667 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
SCAF4-203ENST00000434667 SYNMO15061 1565 aa13.61□□□□□ -0.23
SCAF4-203ENST00000434667 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
SCAF4-203ENST00000434667 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
SCAF4-203ENST00000434667 WDR43Q15061 677 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCAF4-203ENST00000434667 USP32Q8NFA0 1604 aa13.6□□□□□ -0.23
SCAF4-203ENST00000434667 TNNQ9UQP3 1299 aa13.6□□□□□ -0.23
SCAF4-203ENST00000434667 TESK2Q96S53 571 aa13.59□□□□□ -0.23
SCAF4-203ENST00000434667 ARID3AQ99856 593 aa13.59□□□□□ -0.23
SCAF4-203ENST00000434667 APAF1O14727 1248 aa13.59□□□□□ -0.23
SCAF4-203ENST00000434667 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
SCAF4-203ENST00000434667 ABCA6Q8N139 1617 aa13.59□□□□□ -0.23
SCAF4-203ENST00000434667 BCL2L13Q9BXK5 485 aa13.59□□□□□ -0.23
SCAF4-203ENST00000434667 CENPQQ7L2Z9 268 aaPredicted RBP13.58□□□□□ -0.23
SCAF4-203ENST00000434667 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
SCAF4-203ENST00000434667 NAP1L5Q96NT1 182 aaPredicted RBP13.58□□□□□ -0.24
SCAF4-203ENST00000434667 COG6Q9Y2V7 657 aa13.58□□□□□ -0.24
SCAF4-203ENST00000434667 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
SCAF4-203ENST00000434667 EFCAB6Q5THR3 1501 aa13.57□□□□□ -0.24
SCAF4-203ENST00000434667 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
SCAF4-203ENST00000434667 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
SCAF4-203ENST00000434667 GOLGA2Q08379 1002 aa13.56□□□□□ -0.24
SCAF4-203ENST00000434667 RRAGDQ9NQL2 400 aaPredicted RBP13.56□□□□□ -0.24
SCAF4-203ENST00000434667 SHPRHQ149N8 1683 aa13.56□□□□□ -0.24
SCAF4-203ENST00000434667 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
SCAF4-203ENST00000434667 SCAPERQ9BY12 1400 aa13.55□□□□□ -0.24
SCAF4-203ENST00000434667 HECW2Q9P2P5 1572 aa13.55□□□□□ -0.24
SCAF4-203ENST00000434667 MYOM2P54296 1465 aa13.55□□□□□ -0.24
SCAF4-203ENST00000434667 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
SCAF4-203ENST00000434667 CLUAP1Q96AJ1 413 aa13.54□□□□□ -0.24
SCAF4-203ENST00000434667 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
SCAF4-203ENST00000434667 RICTORQ6R327 1708 aa13.54□□□□□ -0.24
SCAF4-203ENST00000434667 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
SCAF4-203ENST00000434667 USP19O94966 1318 aa13.54□□□□□ -0.24
SCAF4-203ENST00000434667 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
SCAF4-203ENST00000434667 ZBTB7CA1YPR0 619 aa13.53□□□□□ -0.24
SCAF4-203ENST00000434667 CFAP74Q9C0B2 1584 aa13.53□□□□□ -0.24
SCAF4-203ENST00000434667 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
SCAF4-203ENST00000434667 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-203ENST00000434667 PANK2Q9BZ23 570 aa13.52□□□□□ -0.25
SCAF4-203ENST00000434667 KIF1BO60333 1816 aa13.52□□□□□ -0.25
SCAF4-203ENST00000434667 TMF1P82094 1093 aa13.52□□□□□ -0.25
SCAF4-203ENST00000434667 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
SCAF4-203ENST00000434667 SLFN5Q08AF3 891 aa13.5□□□□□ -0.25
SCAF4-203ENST00000434667 SETD1AO15047 1707 aaKnown RBP13.5□□□□□ -0.25
SCAF4-203ENST00000434667 TRAPPC8Q9Y2L5 1435 aa13.5□□□□□ -0.25
SCAF4-203ENST00000434667 CCDC144AA2RUR9 1427 aa13.5□□□□□ -0.25
SCAF4-203ENST00000434667 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
SCAF4-203ENST00000434667 ADGRB1O14514 1584 aa13.49□□□□□ -0.25
SCAF4-203ENST00000434667 VIRMAQ69YN4 1812 aaKnown RBP13.48□□□□□ -0.25
SCAF4-203ENST00000434667 TPRNQ4KMQ1 711 aa13.48□□□□□ -0.25
SCAF4-203ENST00000434667 CLTCQ00610 1675 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms