RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 E9PCH4 1651 aa15.83■□□□□ 0.12
RFC1-203ENST00000418436 NOS1P29475 1434 aa15.82■□□□□ 0.12
RFC1-203ENST00000418436 SYNMO15061 1565 aa15.8■□□□□ 0.12
RFC1-203ENST00000418436 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
RFC1-203ENST00000418436 PLA2R1Q13018 1463 aa15.79■□□□□ 0.12
RFC1-203ENST00000418436 UGGT1Q9NYU2 1555 aa15.79■□□□□ 0.12
RFC1-203ENST00000418436 UBR1Q8IWV7 1749 aa15.78■□□□□ 0.12
RFC1-203ENST00000418436 KDM5AP29375 1690 aaKnown RBP15.77■□□□□ 0.12
RFC1-203ENST00000418436 PIK3C2BO00750 1634 aa15.76■□□□□ 0.11
RFC1-203ENST00000418436 SETD5Q9C0A6 1442 aa15.76■□□□□ 0.11
RFC1-203ENST00000418436 THEMISQ8N1K5 641 aaPredicted RBP15.75■□□□□ 0.11
RFC1-203ENST00000418436 IDI1Q13907 227 aa15.74■□□□□ 0.11
RFC1-203ENST00000418436 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
RFC1-203ENST00000418436 POLR1AO95602 1720 aaPredicted RBP15.74■□□□□ 0.11
RFC1-203ENST00000418436 PKD2Q13563 968 aa15.73■□□□□ 0.11
RFC1-203ENST00000418436 PTPRTO14522 1441 aa15.73■□□□□ 0.11
RFC1-203ENST00000418436 SPHKAPQ2M3C7 1700 aa15.73■□□□□ 0.11
RFC1-203ENST00000418436 ACIN1Q9UKV3 1341 aaKnown RBP15.72■□□□□ 0.11
RFC1-203ENST00000418436 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
RFC1-203ENST00000418436 NCKAP5LQ9HCH0 1330 aa15.71■□□□□ 0.11
RFC1-203ENST00000418436 ADGRB3O60242 1522 aa15.7■□□□□ 0.1
RFC1-203ENST00000418436 SLIT1O75093 1534 aa15.7■□□□□ 0.1
RFC1-203ENST00000418436 SPDYE1Q8NFV5 336 aaPredicted RBP15.7■□□□□ 0.1
RFC1-203ENST00000418436 ARHGAP23Q9P227 1491 aa15.7■□□□□ 0.1
RFC1-203ENST00000418436 NEURL4Q96JN8 1562 aa15.7■□□□□ 0.1
RFC1-203ENST00000418436 MYO5BQ9ULV0 1848 aa15.69■□□□□ 0.1
RFC1-203ENST00000418436 RAB3GAP2Q9H2M9 1393 aa15.69■□□□□ 0.1
RFC1-203ENST00000418436 TMEM131LA2VDJ0 1609 aa15.68■□□□□ 0.1
RFC1-203ENST00000418436 MED14O60244 1454 aa15.68■□□□□ 0.1
RFC1-203ENST00000418436 ANKLE2Q86XL3 938 aa15.68■□□□□ 0.1
RFC1-203ENST00000418436 HRCP23327 699 aa15.67■□□□□ 0.1
RFC1-203ENST00000418436 TRPM2O94759 1503 aa15.67■□□□□ 0.1
RFC1-203ENST00000418436 TMEM2Q9UHN6 1383 aa15.66■□□□□ 0.1
RFC1-203ENST00000418436 MPHOSPH9Q99550 1183 aa15.65■□□□□ 0.1
RFC1-203ENST00000418436 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
RFC1-203ENST00000418436 CLTCL1P53675 1640 aa15.64■□□□□ 0.09
RFC1-203ENST00000418436 SCAF11Q99590 1463 aaKnown RBP15.64■□□□□ 0.09
RFC1-203ENST00000418436 LTKP29376 864 aa15.63■□□□□ 0.09
RFC1-203ENST00000418436 IQGAP1P46940 1657 aa15.63■□□□□ 0.09
RFC1-203ENST00000418436 NPHP4O75161 1426 aaPredicted RBP15.62■□□□□ 0.09
RFC1-203ENST00000418436 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
RFC1-203ENST00000418436 TXNDC2Q86VQ3 553 aa15.62■□□□□ 0.09
RFC1-203ENST00000418436 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
RFC1-203ENST00000418436 ZFYVE9O95405 1425 aa15.61■□□□□ 0.09
RFC1-203ENST00000418436 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.095e-6■■■■□ 19.4
RFC1-203ENST00000418436 KIF1BO60333 1816 aa15.61■□□□□ 0.09
RFC1-203ENST00000418436 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
RFC1-203ENST00000418436 EID1Q9Y6B2 187 aa15.6■□□□□ 0.09
RFC1-203ENST00000418436 LTBP4Q8N2S1 1624 aa15.59■□□□□ 0.09
RFC1-203ENST00000418436 RIMS2Q9UQ26 1411 aa15.58■□□□□ 0.08
RFC1-203ENST00000418436 CHGAP10645 457 aaKnown RBP15.57■□□□□ 0.08
RFC1-203ENST00000418436 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
RFC1-203ENST00000418436 TRIM26Q12899 539 aaPredicted RBP15.55■□□□□ 0.08
RFC1-203ENST00000418436 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
RFC1-203ENST00000418436 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.54■□□□□ 0.08
RFC1-203ENST00000418436 PLEKHG1Q9ULL1 1385 aa15.53■□□□□ 0.08
RFC1-203ENST00000418436 NEXMIFQ5QGS0 1516 aa15.53■□□□□ 0.08
RFC1-203ENST00000418436 CCDC144AA2RUR9 1427 aa15.52■□□□□ 0.08
RFC1-203ENST00000418436 STRCP1A6NGW2 1772 aa15.52■□□□□ 0.08
RFC1-203ENST00000418436 CERKQ8TCT0 537 aa15.52■□□□□ 0.08
RFC1-203ENST00000418436 ANKRD30BQ9BXX2 1392 aa15.5■□□□□ 0.07
RFC1-203ENST00000418436 SPATA31E1Q6ZUB1 1445 aa15.5■□□□□ 0.07
RFC1-203ENST00000418436 PPLO60437 1756 aa15.49■□□□□ 0.07
RFC1-203ENST00000418436 CPS1P31327 1500 aa15.49■□□□□ 0.07
RFC1-203ENST00000418436 IQSEC2Q5JU85 1478 aa15.49■□□□□ 0.07
RFC1-203ENST00000418436 PPP1R15AO75807 674 aaPredicted RBP15.49■□□□□ 0.07
RFC1-203ENST00000418436 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
RFC1-203ENST00000418436 RPGRIP1LQ68CZ1 1315 aa15.48■□□□□ 0.07
RFC1-203ENST00000418436 NUTM2DQ5VT03 806 aaPredicted RBP15.48■□□□□ 0.07
RFC1-203ENST00000418436 NRXN3Q9Y4C0 1643 aa15.47■□□□□ 0.07
RFC1-203ENST00000418436 DIP2AQ14689 1571 aa15.47■□□□□ 0.07
RFC1-203ENST00000418436 ADAMTS13Q76LX8 1427 aa15.47■□□□□ 0.07
RFC1-203ENST00000418436 SLC26A8Q96RN1 970 aa15.47■□□□□ 0.07
RFC1-203ENST00000418436 IFT172Q9UG01 1749 aa15.47■□□□□ 0.07
RFC1-203ENST00000418436 SETBP1Q9Y6X0 1596 aa15.47■□□□□ 0.07
RFC1-203ENST00000418436 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.07
RFC1-203ENST00000418436 TBX22Q9Y458 520 aa15.46■□□□□ 0.07
RFC1-203ENST00000418436 NWD1Q149M9 1564 aa15.45■□□□□ 0.06
RFC1-203ENST00000418436 BCANQ96GW7 911 aa15.44■□□□□ 0.06
RFC1-203ENST00000418436 VGFO15240 615 aaPredicted RBP15.43■□□□□ 0.06
RFC1-203ENST00000418436 KCNA6P17658 529 aa15.43■□□□□ 0.06
RFC1-203ENST00000418436 LRRC7Q96NW7 1537 aa15.43■□□□□ 0.06
RFC1-203ENST00000418436 PIK3R4Q99570 1358 aa15.42■□□□□ 0.06
RFC1-203ENST00000418436 FBXO41Q8TF61 875 aa15.42■□□□□ 0.06
RFC1-203ENST00000418436 XIRP1Q702N8 1843 aaKnown RBP15.41■□□□□ 0.06
RFC1-203ENST00000418436 SETD1AO15047 1707 aaKnown RBP15.41■□□□□ 0.06
RFC1-203ENST00000418436 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
RFC1-203ENST00000418436 RGL3Q3MIN7 710 aa15.41■□□□□ 0.06
RFC1-203ENST00000418436 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
RFC1-203ENST00000418436 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
RFC1-203ENST00000418436 ILDR1Q86SU0 546 aaPredicted RBP15.38■□□□□ 0.05
RFC1-203ENST00000418436 ALKQ9UM73 1620 aa15.38■□□□□ 0.05
RFC1-203ENST00000418436 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
RFC1-203ENST00000418436 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
RFC1-203ENST00000418436 ADGRF5Q8IZF2 1346 aa15.37■□□□□ 0.05
RFC1-203ENST00000418436 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
RFC1-203ENST00000418436 METP08581 1390 aa15.36■□□□□ 0.05
RFC1-203ENST00000418436 MYOM2P54296 1465 aa15.36■□□□□ 0.05
RFC1-203ENST00000418436 NRXN1Q9ULB1 1477 aa15.36■□□□□ 0.05
RFC1-203ENST00000418436 PROM2Q8N271 834 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms