RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 KDM5AP29375 1690 aaKnown RBP12.42□□□□□ -0.42
RAE1-202ENST00000395840 PKD2Q13563 968 aa12.41□□□□□ -0.42
RAE1-202ENST00000395840 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
RAE1-202ENST00000395840 PTPRTO14522 1441 aa12.41□□□□□ -0.42
RAE1-202ENST00000395840 THEMISQ8N1K5 641 aaPredicted RBP12.41□□□□□ -0.42
RAE1-202ENST00000395840 LMTK3Q96Q04 1460 aa12.4□□□□□ -0.42
RAE1-202ENST00000395840 IRX6P78412 446 aaPredicted RBP12.4□□□□□ -0.42
RAE1-202ENST00000395840 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.42
RAE1-202ENST00000395840 TRPM2O94759 1503 aa12.38□□□□□ -0.43
RAE1-202ENST00000395840 SYNMO15061 1565 aa12.38□□□□□ -0.43
RAE1-202ENST00000395840 UGGT1Q9NYU2 1555 aa12.38□□□□□ -0.43
RAE1-202ENST00000395840 DHX57Q6P158 1386 aaKnown RBP12.38□□□□□ -0.43
RAE1-202ENST00000395840 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
RAE1-202ENST00000395840 PLA2R1Q13018 1463 aa12.37□□□□□ -0.43
RAE1-202ENST00000395840 HDGFP51858 240 aaKnown RBP12.37□□□□□ -0.43
RAE1-202ENST00000395840 PIK3C2BO00750 1634 aa12.37□□□□□ -0.43
RAE1-202ENST00000395840 CFAP65Q6ZU64 1925 aaKnown RBP12.37□□□□□ -0.43
RAE1-202ENST00000395840 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
RAE1-202ENST00000395840 ADGRB3O60242 1522 aa12.35□□□□□ -0.43
RAE1-202ENST00000395840 IDI1Q13907 227 aa12.35□□□□□ -0.43
RAE1-202ENST00000395840 DDX10Q13206 875 aaKnown RBP12.34□□□□□ -0.43
RAE1-202ENST00000395840 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
RAE1-202ENST00000395840 CCDC144AA2RUR9 1427 aa12.33□□□□□ -0.44
RAE1-202ENST00000395840 ANKLE2Q86XL3 938 aa12.33□□□□□ -0.44
RAE1-202ENST00000395840 EID1Q9Y6B2 187 aa12.33□□□□□ -0.44
RAE1-202ENST00000395840 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
RAE1-202ENST00000395840 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAE1-202ENST00000395840 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
RAE1-202ENST00000395840 SLIT1O75093 1534 aa12.32□□□□□ -0.44
RAE1-202ENST00000395840 KIF1BO60333 1816 aa12.31□□□□□ -0.44
RAE1-202ENST00000395840 TMEM131LA2VDJ0 1609 aa12.31□□□□□ -0.44
RAE1-202ENST00000395840 ARHGAP23Q9P227 1491 aa12.3□□□□□ -0.44
RAE1-202ENST00000395840 RPGRIP1LQ68CZ1 1315 aa12.3□□□□□ -0.44
RAE1-202ENST00000395840 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
RAE1-202ENST00000395840 CLTCL1P53675 1640 aa12.3□□□□□ -0.44
RAE1-202ENST00000395840 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
RAE1-202ENST00000395840 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
RAE1-202ENST00000395840 HSPA2P54652 639 aa12.29□□□□□ -0.44
RAE1-202ENST00000395840 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
RAE1-202ENST00000395840 POLR1AO95602 1720 aaPredicted RBP12.28□□□□□ -0.44
RAE1-202ENST00000395840 CCER2I3L3R5 266 aa12.27□□□□□ -0.44
RAE1-202ENST00000395840 FOXD1Q16676 465 aa12.27□□□□□ -0.44
RAE1-202ENST00000395840 STAC3Q96MF2 364 aa12.27□□□□□ -0.44
RAE1-202ENST00000395840 MED14O60244 1454 aa12.27□□□□□ -0.44
RAE1-202ENST00000395840 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.44
RAE1-202ENST00000395840 WASHC2AQ641Q2 1341 aa12.27□□□□□ -0.45
RAE1-202ENST00000395840 C11orf95C9JLR9 678 aaPredicted RBP12.26□□□□□ -0.45
RAE1-202ENST00000395840 ZNF326Q5BKZ1 582 aaKnown RBP12.26□□□□□ -0.45
RAE1-202ENST00000395840 TXNDC2Q86VQ3 553 aa12.26□□□□□ -0.45
RAE1-202ENST00000395840 RIMS2Q9UQ26 1411 aa12.26□□□□□ -0.45
RAE1-202ENST00000395840 IPO9Q96P70 1041 aaKnown RBP12.26□□□□□ -0.45
RAE1-202ENST00000395840 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
RAE1-202ENST00000395840 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
RAE1-202ENST00000395840 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
RAE1-202ENST00000395840 STRCQ7RTU9 1775 aa12.25□□□□□ -0.45
RAE1-202ENST00000395840 ZFYVE9O95405 1425 aa12.25□□□□□ -0.45
RAE1-202ENST00000395840 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
RAE1-202ENST00000395840 PPP1R15AO75807 674 aaPredicted RBP12.24□□□□□ -0.45
RAE1-202ENST00000395840 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
RAE1-202ENST00000395840 B4GALNT3Q6L9W6 998 aa12.24□□□□□ -0.45
RAE1-202ENST00000395840 NPHP4O75161 1426 aaPredicted RBP12.24□□□□□ -0.45
RAE1-202ENST00000395840 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
RAE1-202ENST00000395840 NCKAP5LQ9HCH0 1330 aa12.23□□□□□ -0.45
RAE1-202ENST00000395840 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
RAE1-202ENST00000395840 PLEKHG1Q9ULL1 1385 aa12.23□□□□□ -0.45
RAE1-202ENST00000395840 MYO5BQ9ULV0 1848 aa12.23□□□□□ -0.45
RAE1-202ENST00000395840 ANP32CO43423 234 aa12.23□□□□□ -0.45
RAE1-202ENST00000395840 IQGAP1P46940 1657 aa12.22□□□□□ -0.45
RAE1-202ENST00000395840 LTKP29376 864 aa12.21□□□□□ -0.46
RAE1-202ENST00000395840 DIP2AQ14689 1571 aa12.2□□□□□ -0.46
RAE1-202ENST00000395840 NEXMIFQ5QGS0 1516 aa12.2□□□□□ -0.46
RAE1-202ENST00000395840 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAE1-202ENST00000395840 PPLO60437 1756 aa12.19□□□□□ -0.46
RAE1-202ENST00000395840 NEFMP07197 916 aa12.18□□□□□ -0.46
RAE1-202ENST00000395840 ZMYND15Q9H091 742 aa12.18□□□□□ -0.46
RAE1-202ENST00000395840 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
RAE1-202ENST00000395840 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
RAE1-202ENST00000395840 MYOM2P54296 1465 aa12.18□□□□□ -0.46
RAE1-202ENST00000395840 PIK3R4Q99570 1358 aa12.17□□□□□ -0.46
RAE1-202ENST00000395840 SETBP1Q9Y6X0 1596 aa12.17□□□□□ -0.46
RAE1-202ENST00000395840 GLIPR1L2Q4G1C9 344 aa12.17□□□□□ -0.46
RAE1-202ENST00000395840 TBX22Q9Y458 520 aa12.17□□□□□ -0.46
RAE1-202ENST00000395840 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
RAE1-202ENST00000395840 DAXXQ9UER7 740 aaPredicted RBP12.17□□□□□ -0.46
RAE1-202ENST00000395840 USP35Q9P2H5 1018 aa12.16□□□□□ -0.46
RAE1-202ENST00000395840 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
RAE1-202ENST00000395840 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
RAE1-202ENST00000395840 CPS1P31327 1500 aa12.13□□□□□ -0.47
RAE1-202ENST00000395840 LAMC1P11047 1609 aa12.13□□□□□ -0.47
RAE1-202ENST00000395840 NRXN1Q9ULB1 1477 aa12.13□□□□□ -0.47
RAE1-202ENST00000395840 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
RAE1-202ENST00000395840 DCAF11Q8TEB1 546 aa12.12□□□□□ -0.47
RAE1-202ENST00000395840 TONSLQ96HA7 1378 aa12.12□□□□□ -0.47
RAE1-202ENST00000395840 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
RAE1-202ENST00000395840 ADAMTS13Q76LX8 1427 aa12.12□□□□□ -0.47
RAE1-202ENST00000395840 KCNA6P17658 529 aa12.11□□□□□ -0.47
RAE1-202ENST00000395840 NUTM2DQ5VT03 806 aaPredicted RBP12.11□□□□□ -0.47
RAE1-202ENST00000395840 SIN3AQ96ST3 1273 aa12.1□□□□□ -0.47
RAE1-202ENST00000395840 IQSEC2Q5JU85 1478 aa12.1□□□□□ -0.47
RAE1-202ENST00000395840 SLC26A8Q96RN1 970 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms