RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 UNC13BO14795 1591 aa28.52■■■□□ 2.16
CLDND1-202ENST00000394180 PKD2Q13563 968 aa28.51■■■□□ 2.16
CLDND1-202ENST00000394180 KDM5DQ9BY66 1539 aa28.51■■■□□ 2.15
CLDND1-202ENST00000394180 RCAN3Q9UKA8 241 aa28.5■■■□□ 2.15
CLDND1-202ENST00000394180 FAM135AQ9P2D6 1515 aa28.5■■■□□ 2.15
CLDND1-202ENST00000394180 BRD4O60885 1362 aaPredicted RBP28.49■■■□□ 2.15
CLDND1-202ENST00000394180 RRP9O43818 475 aaKnown RBP28.49■■■□□ 2.15
CLDND1-202ENST00000394180 L1TD1Q5T7N2 865 aaKnown RBP28.47■■■□□ 2.15
CLDND1-202ENST00000394180 INSRP06213 1382 aa28.47■■■□□ 2.15
CLDND1-202ENST00000394180 MAGI2Q86UL8 1455 aa28.47■■■□□ 2.15
CLDND1-202ENST00000394180 EIF2AK4Q9P2K8 1649 aaKnown RBP28.44■■■□□ 2.14
CLDND1-202ENST00000394180 DCAF11Q8TEB1 546 aa28.43■■■□□ 2.14
CLDND1-202ENST00000394180 DEPDC5O75140 1603 aa28.42■■■□□ 2.14
CLDND1-202ENST00000394180 GGT6Q6P531 493 aa28.42■■■□□ 2.14
CLDND1-202ENST00000394180 IQGAP3Q86VI3 1631 aa28.42■■■□□ 2.14
CLDND1-202ENST00000394180 ANKRD30BQ9BXX2 1392 aa28.41■■■□□ 2.14
CLDND1-202ENST00000394180 ZMYND15Q9H091 742 aa28.41■■■□□ 2.14
CLDND1-202ENST00000394180 MROH1Q8NDA8 1641 aa28.4■■■□□ 2.14
CLDND1-202ENST00000394180 TMC1Q8TDI8 760 aa28.39■■■□□ 2.14
CLDND1-202ENST00000394180 ATP10AO60312 1499 aa28.39■■■□□ 2.13
CLDND1-202ENST00000394180 NBPF8Q3BBV2 869 aa28.37■■■□□ 2.13
CLDND1-202ENST00000394180 PRDM15P57071 1507 aaPredicted RBP28.36■■■□□ 2.13
CLDND1-202ENST00000394180 FAM161AQ3B820 660 aa28.35■■■□□ 2.13
CLDND1-202ENST00000394180 KANK1Q14678 1352 aa28.34■■■□□ 2.13
CLDND1-202ENST00000394180 FRAT2O75474 233 aaPredicted RBP28.34■■■□□ 2.13
CLDND1-202ENST00000394180 RNF17Q9BXT8 1623 aaKnown RBP28.33■■■□□ 2.13
CLDND1-202ENST00000394180 RALBP1Q15311 655 aa28.33■■■□□ 2.13
CLDND1-202ENST00000394180 ARHGEF40Q8TER5 1519 aa28.33■■■□□ 2.13
CLDND1-202ENST00000394180 SIGLEC1Q9BZZ2 1709 aa28.32■■■□□ 2.12
CLDND1-202ENST00000394180 VWDEQ8N2E2 1590 aa28.32■■■□□ 2.12
CLDND1-202ENST00000394180 VSIG10Q8N0Z9 540 aa28.31■■■□□ 2.12
CLDND1-202ENST00000394180 BCORL1Q5H9F3 1711 aa28.31■■■□□ 2.12
CLDND1-202ENST00000394180 MYBBP1AQ9BQG0 1328 aaKnown RBP28.3■■■□□ 2.12
CLDND1-202ENST00000394180 HSP90AA2PQ14568 343 aaPredicted RBP28.3■■■□□ 2.12
CLDND1-202ENST00000394180 RRAGDQ9NQL2 400 aaPredicted RBP28.3■■■□□ 2.12
CLDND1-202ENST00000394180 KDM2BQ8NHM5 1336 aa28.3■■■□□ 2.12
CLDND1-202ENST00000394180 CLCN1P35523 988 aa28.3■■■□□ 2.12
CLDND1-202ENST00000394180 CENPQQ7L2Z9 268 aaPredicted RBP28.28■■■□□ 2.12
CLDND1-202ENST00000394180 HSP90AA1P07900 732 aaKnown RBP28.26■■■□□ 2.11
CLDND1-202ENST00000394180 CEP152O94986 1710 aa28.25■■■□□ 2.11
CLDND1-202ENST00000394180 E9PCH4 1651 aa28.25■■■□□ 2.11
CLDND1-202ENST00000394180 REREQ9P2R6 1566 aa28.25■■■□□ 2.11
CLDND1-202ENST00000394180 MLECQ14165 292 aa28.24■■■□□ 2.11
CLDND1-202ENST00000394180 PLA2R1Q13018 1463 aa28.24■■■□□ 2.11
CLDND1-202ENST00000394180 TET3O43151 1660 aa28.23■■■□□ 2.11
CLDND1-202ENST00000394180 C8orf34Q49A92 452 aa28.22■■■□□ 2.11
CLDND1-202ENST00000394180 PNNQ9H307 717 aaKnown RBP28.21■■■□□ 2.11
CLDND1-202ENST00000394180 USP47Q96K76 1375 aa28.2■■■□□ 2.11
CLDND1-202ENST00000394180 ABCC3O15438 1527 aa28.19■■■□□ 2.1
CLDND1-202ENST00000394180 AGLP35573 1532 aa28.19■■■□□ 2.1
CLDND1-202ENST00000394180 SLC4A3P48751 1232 aa28.18■■■□□ 2.1
CLDND1-202ENST00000394180 EFCAB6Q5THR3 1501 aa28.18■■■□□ 2.1
CLDND1-202ENST00000394180 LMTK2Q8IWU2 1503 aa28.18■■■□□ 2.1
CLDND1-202ENST00000394180 CENPJQ9HC77 1338 aaPredicted RBP28.17■■■□□ 2.1
CLDND1-202ENST00000394180 VIRMAQ69YN4 1812 aaKnown RBP28.17■■■□□ 2.1
CLDND1-202ENST00000394180 CCDC144AA2RUR9 1427 aa28.14■■■□□ 2.1
CLDND1-202ENST00000394180 NPATQ14207 1427 aa28.13■■■□□ 2.09
CLDND1-202ENST00000394180 CRBNQ96SW2 442 aa28.13■■■□□ 2.09
CLDND1-202ENST00000394180 CFAP65Q6ZU64 1925 aaKnown RBP28.12■■■□□ 2.09
CLDND1-202ENST00000394180 UHRF1BP1Q6BDS2 1440 aa28.11■■■□□ 2.09
CLDND1-202ENST00000394180 NAP1L5Q96NT1 182 aaPredicted RBP28.11■■■□□ 2.09
CLDND1-202ENST00000394180 NLRP13Q86W25 1043 aa28.1■■■□□ 2.09
CLDND1-202ENST00000394180 BLMP54132 1417 aaPredicted RBP28.1■■■□□ 2.09
CLDND1-202ENST00000394180 CAMSAP1Q5T5Y3 1602 aa28.1■■■□□ 2.09
CLDND1-202ENST00000394180 PTPRTO14522 1441 aa28.09■■■□□ 2.09
CLDND1-202ENST00000394180 SPHKAPQ2M3C7 1700 aa28.09■■■□□ 2.09
CLDND1-202ENST00000394180 FSD2A1L4K1 749 aa28.08■■■□□ 2.09
CLDND1-202ENST00000394180 BECN1Q14457 450 aa28.08■■■□□ 2.09
CLDND1-202ENST00000394180 POGKQ9P215 609 aa28.07■■■□□ 2.08
CLDND1-202ENST00000394180 RALGAPBQ86X10 1494 aa28.07■■■□□ 2.08
CLDND1-202ENST00000394180 TRPM2O94759 1503 aa28.06■■■□□ 2.08
CLDND1-202ENST00000394180 ZC3H13Q5T200 1668 aaKnown RBP28.06■■■□□ 2.08
CLDND1-202ENST00000394180 UGGT1Q9NYU2 1555 aa28.05■■■□□ 2.08
CLDND1-202ENST00000394180 PARD3Q8TEW0 1356 aa28.05■■■□□ 2.08
CLDND1-202ENST00000394180 RGL3Q3MIN7 710 aa28.05■■■□□ 2.08
CLDND1-202ENST00000394180 ISY1Q9ULR0 285 aaKnown RBP28.05■■■□□ 2.08
CLDND1-202ENST00000394180 CLTCQ00610 1675 aaKnown RBP28.03■■■□□ 2.08
CLDND1-202ENST00000394180 CLTCL1P53675 1640 aa28.02■■■□□ 2.08
CLDND1-202ENST00000394180 TPM2P07951 284 aa28.01■■■□□ 2.07
CLDND1-202ENST00000394180 PPP6R1Q9UPN7 881 aa28.01■■■□□ 2.07
CLDND1-202ENST00000394180 GOLGA6L3A6NEY3 463 aa28■■■□□ 2.07
CLDND1-202ENST00000394180 FBXO31Q5XUX0 539 aaPredicted RBP28■■■□□ 2.07
CLDND1-202ENST00000394180 PODXL2Q9NZ53 605 aa28■■■□□ 2.07
CLDND1-202ENST00000394180 ARHGAP31Q2M1Z3 1444 aa27.99■■■□□ 2.07
CLDND1-202ENST00000394180 XRCC6P12956 609 aaKnown RBP eCLIP27.98■■■□□ 2.07
CLDND1-202ENST00000394180 PDCL3Q9H2J4 239 aa27.98■■■□□ 2.07
CLDND1-202ENST00000394180 ESF1Q9H501 851 aaKnown RBP27.98■■■□□ 2.07
CLDND1-202ENST00000394180 KDM2AQ9Y2K7 1162 aa27.96■■■□□ 2.07
CLDND1-202ENST00000394180 EIF3AQ14152 1382 aaKnown RBP27.96■■■□□ 2.07
CLDND1-202ENST00000394180 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.96■■■□□ 2.07
CLDND1-202ENST00000394180 ZMYM3Q14202 1370 aa27.94■■■□□ 2.06
CLDND1-202ENST00000394180 NOS1P29475 1434 aa27.94■■■□□ 2.06
CLDND1-202ENST00000394180 ZNF326Q5BKZ1 582 aaKnown RBP27.94■■■□□ 2.06
CLDND1-202ENST00000394180 ANTXR1Q9H6X2 564 aa27.94■■■□□ 2.06
CLDND1-202ENST00000394180 MRE11P49959 708 aa27.92■■■□□ 2.06
CLDND1-202ENST00000394180 PLIN1O60240 522 aa27.92■■■□□ 2.06
CLDND1-202ENST00000394180 CALD1Q05682 793 aaKnown RBP27.92■■■□□ 2.06
CLDND1-202ENST00000394180 USP19O94966 1318 aa27.92■■■□□ 2.06
CLDND1-202ENST00000394180 SYNMO15061 1565 aa27.92■■■□□ 2.06
CLDND1-202ENST00000394180 CDCA7LQ96GN5 454 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms