RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 MPNDQ8N594 471 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 PRIMPOLQ96LW4 560 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 IGHDP01880 384 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 MMP14P50281 582 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 MFAP1P55081 439 aaKnown RBP10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 HOMEZQ8IX15 550 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 PSEN1P49768 467 aa10.54□□□□□ -0.72
NHLRC3-201ENST00000379599 PRR29P0C7W0 189 aa10.54□□□□□ -0.72
NHLRC3-201ENST00000379599 CC2D1BQ5T0F9 858 aaKnown RBP10.54□□□□□ -0.72
NHLRC3-201ENST00000379599 RBSNQ9H1K0 784 aa10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 LRPPRCP42704 1394 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 HSP90AB1P08238 724 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 RALBP1Q15311 655 aa10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 CAVIN1Q6NZI2 390 aaKnown RBP10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 C22orf23Q9BZE7 217 aa10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 CALCOCO1Q9P1Z2 691 aa10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 CCDC18Q5T9S5 1454 aa10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
NHLRC3-201ENST00000379599 EP400NLQ6ZTU2 488 aa10.52□□□□□ -0.72
NHLRC3-201ENST00000379599 GABPB1Q06547 395 aaPredicted RBP10.52□□□□□ -0.73
NHLRC3-201ENST00000379599 OGFRQ9NZT2 677 aa10.52□□□□□ -0.73
NHLRC3-201ENST00000379599 KDM5BQ9UGL1 1544 aa10.52□□□□□ -0.73
NHLRC3-201ENST00000379599 UACAQ9BZF9 1416 aa10.52□□□□□ -0.73
NHLRC3-201ENST00000379599 MYBBP1AQ9BQG0 1328 aaKnown RBP10.52□□□□□ -0.73
NHLRC3-201ENST00000379599 NBPF8Q3BBV2 869 aa10.52□□□□□ -0.73
NHLRC3-201ENST00000379599 AXDND1Q5T1B0 1012 aaPredicted RBP10.52□□□□□ -0.73
NHLRC3-201ENST00000379599 ZNF622Q969S3 477 aaKnown RBP eCLIP10.52□□□□□ -0.73
NHLRC3-201ENST00000379599 PDLIM2Q96JY6 352 aa10.51□□□□□ -0.73
NHLRC3-201ENST00000379599 TSPYL1Q9H0U9 437 aa10.51□□□□□ -0.73
NHLRC3-201ENST00000379599 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
NHLRC3-201ENST00000379599 GEMIN8Q9NWZ8 242 aaKnown RBP10.51□□□□□ -0.73
NHLRC3-201ENST00000379599 SYNJ1O43426 1573 aa10.5□□□□□ -0.73
NHLRC3-201ENST00000379599 SLFN14P0C7P3 912 aa10.5□□□□□ -0.73
NHLRC3-201ENST00000379599 FEZ1Q99689 392 aa10.5□□□□□ -0.73
NHLRC3-201ENST00000379599 BRD4O60885 1362 aaPredicted RBP10.5□□□□□ -0.73
NHLRC3-201ENST00000379599 RBM25P49756 843 aaKnown RBP10.5□□□□□ -0.73
NHLRC3-201ENST00000379599 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
NHLRC3-201ENST00000379599 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
NHLRC3-201ENST00000379599 NLRP1Q9C000 1473 aa10.49□□□□□ -0.73
NHLRC3-201ENST00000379599 RNF214Q8ND24 703 aa10.49□□□□□ -0.73
NHLRC3-201ENST00000379599 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
NHLRC3-201ENST00000379599 HSP90B1P14625 803 aaKnown RBP10.49□□□□□ -0.73
NHLRC3-201ENST00000379599 PRIM1P49642 420 aaKnown RBP10.49□□□□□ -0.73
NHLRC3-201ENST00000379599 LMOD3Q0VAK6 560 aa10.49□□□□□ -0.73
NHLRC3-201ENST00000379599 KLHL40Q2TBA0 621 aa10.49□□□□□ -0.73
NHLRC3-201ENST00000379599 C17orf53Q8N3J3 647 aaPredicted RBP10.49□□□□□ -0.73
NHLRC3-201ENST00000379599 GTF2F1P35269 517 aaKnown RBP eCLIP10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 GTF2A1P52655 376 aaPredicted RBP10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 TMED8Q6PL24 325 aaPredicted RBP10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 BANK1Q8NDB2 785 aa10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 CHAF1AQ13111 956 aaPredicted RBP10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 ZSCAN23Q3MJ62 389 aa10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 YY1AP1Q9H869 796 aa10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 TULP2O00295 520 aa10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 NOLC1Q14978 699 aaKnown RBP eCLIP10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 RAB3GAP1Q15042 981 aa10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 RSPH14Q9UHP6 348 aa10.48□□□□□ -0.73
NHLRC3-201ENST00000379599 SSFA2P28290 1259 aa10.47□□□□□ -0.73
NHLRC3-201ENST00000379599 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
NHLRC3-201ENST00000379599 FEZ2Q9UHY8 353 aaPredicted RBP10.47□□□□□ -0.73
NHLRC3-201ENST00000379599 ZNF445P59923 1031 aa10.46□□□□□ -0.73
NHLRC3-201ENST00000379599 TERF2Q15554 542 aa10.46□□□□□ -0.73
NHLRC3-201ENST00000379599 EFCC1Q9HA90 598 aa10.46□□□□□ -0.73
NHLRC3-201ENST00000379599 MCTP1Q6DN14 999 aa10.46□□□□□ -0.73
NHLRC3-201ENST00000379599 GPATCH11Q8N954 259 aa10.46□□□□□ -0.74
NHLRC3-201ENST00000379599 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.74
NHLRC3-201ENST00000379599 AQRO60306 1485 aaKnown RBP eCLIP10.46□□□□□ -0.74
NHLRC3-201ENST00000379599 KIF15Q9NS87 1388 aa10.45□□□□□ -0.74
NHLRC3-201ENST00000379599 NINLQ9Y2I6 1382 aa10.45□□□□□ -0.74
NHLRC3-201ENST00000379599 NLRP13Q86W25 1043 aa10.45□□□□□ -0.74
NHLRC3-201ENST00000379599 DNAJC5BQ9UF47 199 aa10.45□□□□□ -0.74
NHLRC3-201ENST00000379599 RIOK3O14730 519 aaKnown RBP10.45□□□□□ -0.74
NHLRC3-201ENST00000379599 TOMM22Q9NS69 142 aa10.44□□□□□ -0.74
NHLRC3-201ENST00000379599 DIAPH3Q9NSV4 1193 aa10.44□□□□□ -0.74
NHLRC3-201ENST00000379599 RBM27Q9P2N5 1060 aaKnown RBP10.44□□□□□ -0.74
NHLRC3-201ENST00000379599 RRP7BPQ9NSQ0 103 aa10.43□□□□□ -0.74
NHLRC3-201ENST00000379599 IBTKQ9P2D0 1353 aaPredicted RBP10.43□□□□□ -0.74
NHLRC3-201ENST00000379599 BAG4O95429 457 aaKnown RBP10.43□□□□□ -0.74
NHLRC3-201ENST00000379599 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
NHLRC3-201ENST00000379599 ANKRD7Q92527 254 aa10.43□□□□□ -0.74
NHLRC3-201ENST00000379599 MYCBPQ99417 103 aaPredicted RBP10.43□□□□□ -0.74
NHLRC3-201ENST00000379599 COG6Q9Y2V7 657 aa10.43□□□□□ -0.74
NHLRC3-201ENST00000379599 LRRC9Q6ZRR7 1453 aa10.43□□□□□ -0.74
NHLRC3-201ENST00000379599 BCAR3O75815 825 aa10.42□□□□□ -0.74
NHLRC3-201ENST00000379599 SMC5Q8IY18 1101 aa10.42□□□□□ -0.74
NHLRC3-201ENST00000379599 TTC12Q9H892 705 aaPredicted RBP10.42□□□□□ -0.74
NHLRC3-201ENST00000379599 PDZRN3Q9UPQ7 1066 aa10.42□□□□□ -0.74
NHLRC3-201ENST00000379599 SYCE3A1L190 88 aa10.41□□□□□ -0.74
NHLRC3-201ENST00000379599 DDIT3P35638 169 aa10.41□□□□□ -0.74
NHLRC3-201ENST00000379599 HNRNPH2P55795 449 aaKnown RBP10.41□□□□□ -0.74
NHLRC3-201ENST00000379599 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
NHLRC3-201ENST00000379599 CTNNA3Q9UI47 895 aa10.41□□□□□ -0.74
NHLRC3-201ENST00000379599 CHIC2Q9UKJ5 165 aa10.41□□□□□ -0.74
NHLRC3-201ENST00000379599 TNNT1P13805 278 aa10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 DUSP27Q5VZP5 1158 aa10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 KRT222Q8N1A0 295 aa10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 SIRT1Q96EB6 747 aa10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 RASSF4Q9H2L5 321 aa10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 SMC4Q9NTJ3 1288 aa10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 FMN1Q68DA7 1419 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms