RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
UBA3-202ENST00000361055 NEURL4Q96JN8 1562 aa16.95■□□□□ 0.3
UBA3-202ENST00000361055 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
UBA3-202ENST00000361055 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
UBA3-202ENST00000361055 ZBED9Q6R2W3 1325 aa16.93■□□□□ 0.3
UBA3-202ENST00000361055 SLC52A1Q9NWF4 448 aa16.93■□□□□ 0.3
UBA3-202ENST00000361055 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
UBA3-202ENST00000361055 FAM9BQ8IZU0 186 aa16.91■□□□□ 0.3
UBA3-202ENST00000361055 ADGRB3O60242 1522 aa16.89■□□□□ 0.29
UBA3-202ENST00000361055 IDI1Q13907 227 aa16.89■□□□□ 0.29
UBA3-202ENST00000361055 RGL3Q3MIN7 710 aa16.89■□□□□ 0.29
UBA3-202ENST00000361055 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
UBA3-202ENST00000361055 TNRQ92752 1358 aa16.87■□□□□ 0.29
UBA3-202ENST00000361055 IRX6P78412 446 aaPredicted RBP16.87■□□□□ 0.29
UBA3-202ENST00000361055 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
UBA3-202ENST00000361055 POLR1AO95602 1720 aaPredicted RBP16.86■□□□□ 0.29
UBA3-202ENST00000361055 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
UBA3-202ENST00000361055 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
UBA3-202ENST00000361055 TMEM131LA2VDJ0 1609 aa16.86■□□□□ 0.29
UBA3-202ENST00000361055 CHGAP10645 457 aaKnown RBP16.85■□□□□ 0.29
UBA3-202ENST00000361055 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
UBA3-202ENST00000361055 STAC3Q96MF2 364 aa16.84■□□□□ 0.29
UBA3-202ENST00000361055 KDM5AP29375 1690 aaKnown RBP16.83■□□□□ 0.28
UBA3-202ENST00000361055 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
UBA3-202ENST00000361055 NLRP1Q9C000 1473 aa16.82■□□□□ 0.28
UBA3-202ENST00000361055 PPLO60437 1756 aa16.82■□□□□ 0.28
UBA3-202ENST00000361055 UHRF1BP1Q6BDS2 1440 aa16.82■□□□□ 0.28
UBA3-202ENST00000361055 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
UBA3-202ENST00000361055 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
UBA3-202ENST00000361055 USP47Q96K76 1375 aa16.82■□□□□ 0.28
UBA3-202ENST00000361055 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
UBA3-202ENST00000361055 RPGRIP1LQ68CZ1 1315 aa16.81■□□□□ 0.28
UBA3-202ENST00000361055 PTPRMP28827 1452 aa16.81■□□□□ 0.28
UBA3-202ENST00000361055 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
UBA3-202ENST00000361055 MYO3AQ8NEV4 1616 aa16.79■□□□□ 0.28
UBA3-202ENST00000361055 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
UBA3-202ENST00000361055 UBR1Q8IWV7 1749 aa16.79■□□□□ 0.28
UBA3-202ENST00000361055 A2ML1A8K2U0 1454 aa16.79■□□□□ 0.28
UBA3-202ENST00000361055 MYOM2P54296 1465 aa16.79■□□□□ 0.28
UBA3-202ENST00000361055 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
UBA3-202ENST00000361055 NEXMIFQ5QGS0 1516 aa16.78■□□□□ 0.28
UBA3-202ENST00000361055 PRAG1Q86YV5 1406 aa16.78■□□□□ 0.28
UBA3-202ENST00000361055 MSH5O43196 834 aa16.77■□□□□ 0.28
UBA3-202ENST00000361055 TRPM1Q7Z4N2 1603 aa16.75■□□□□ 0.27
UBA3-202ENST00000361055 RALGAPBQ86X10 1494 aa16.74■□□□□ 0.27
UBA3-202ENST00000361055 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
UBA3-202ENST00000361055 RNF123Q5XPI4 1314 aa16.74■□□□□ 0.27
UBA3-202ENST00000361055 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
UBA3-202ENST00000361055 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
UBA3-202ENST00000361055 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
UBA3-202ENST00000361055 KDM4FA0A1W2PPD8 638 aa16.73■□□□□ 0.27
UBA3-202ENST00000361055 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
UBA3-202ENST00000361055 CEP170BQ9Y4F5 1589 aaPredicted RBP16.73■□□□□ 0.27
UBA3-202ENST00000361055 PNISRQ8TF01 805 aaKnown RBP16.72■□□□□ 0.27
UBA3-202ENST00000361055 KIAA1210Q9ULL0 1709 aa16.72■□□□□ 0.27
UBA3-202ENST00000361055 ADGRF5Q8IZF2 1346 aa16.72■□□□□ 0.27
UBA3-202ENST00000361055 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
UBA3-202ENST00000361055 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
UBA3-202ENST00000361055 RIMS2Q9UQ26 1411 aa16.71■□□□□ 0.26
UBA3-202ENST00000361055 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
UBA3-202ENST00000361055 HDGFP51858 240 aaKnown RBP16.7■□□□□ 0.26
UBA3-202ENST00000361055 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
UBA3-202ENST00000361055 PIK3C2GO75747 1445 aa16.69■□□□□ 0.26
UBA3-202ENST00000361055 TMEM2Q9UHN6 1383 aa16.69■□□□□ 0.26
UBA3-202ENST00000361055 THEMISQ8N1K5 641 aaPredicted RBP16.69■□□□□ 0.26
UBA3-202ENST00000361055 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.69■□□□□ 0.26
UBA3-202ENST00000361055 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
UBA3-202ENST00000361055 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
UBA3-202ENST00000361055 SLIT1O75093 1534 aa16.68■□□□□ 0.26
UBA3-202ENST00000361055 RALBP1Q15311 655 aa16.67■□□□□ 0.26
UBA3-202ENST00000361055 LAMC1P11047 1609 aa16.67■□□□□ 0.26
UBA3-202ENST00000361055 ARHGAP23Q9P227 1491 aa16.66■□□□□ 0.26
UBA3-202ENST00000361055 GPRASP1Q5JY77 1395 aa16.66■□□□□ 0.26
UBA3-202ENST00000361055 ST20-MTHFSA0A0A6YYL1 179 aa16.65■□□□□ 0.26
UBA3-202ENST00000361055 BRD4O60885 1362 aaPredicted RBP16.65■□□□□ 0.26
UBA3-202ENST00000361055 NBPF1Q3BBV0 1214 aa16.65■□□□□ 0.26
UBA3-202ENST00000361055 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
UBA3-202ENST00000361055 CFAP70Q5T0N1 1121 aa16.64■□□□□ 0.25
UBA3-202ENST00000361055 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
UBA3-202ENST00000361055 SETBP1Q9Y6X0 1596 aa16.63■□□□□ 0.25
UBA3-202ENST00000361055 MYBBP1AQ9BQG0 1328 aaKnown RBP16.63■□□□□ 0.25
UBA3-202ENST00000361055 ERICH6Q7L0X2 663 aa16.62■□□□□ 0.25
UBA3-202ENST00000361055 EID1Q9Y6B2 187 aa16.62■□□□□ 0.25
UBA3-202ENST00000361055 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
UBA3-202ENST00000361055 TXNDC2Q86VQ3 553 aa16.61■□□□□ 0.25
UBA3-202ENST00000361055 LTKP29376 864 aa16.6■□□□□ 0.25
UBA3-202ENST00000361055 ALKQ9UM73 1620 aa16.6■□□□□ 0.25
UBA3-202ENST00000361055 NRXN3Q9Y4C0 1643 aa16.6■□□□□ 0.25
UBA3-202ENST00000361055 IQGAP1P46940 1657 aa16.59■□□□□ 0.25
UBA3-202ENST00000361055 SCAF11Q99590 1463 aaKnown RBP16.59■□□□□ 0.25
UBA3-202ENST00000361055 PLEKHG1Q9ULL1 1385 aa16.59■□□□□ 0.25
UBA3-202ENST00000361055 ADGRB1O14514 1584 aa16.59■□□□□ 0.25
UBA3-202ENST00000361055 CCDC136Q96JN2 1154 aa16.58■□□□□ 0.25
UBA3-202ENST00000361055 SETD1AO15047 1707 aaKnown RBP16.58■□□□□ 0.25
UBA3-202ENST00000361055 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
UBA3-202ENST00000361055 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
UBA3-202ENST00000361055 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
UBA3-202ENST00000361055 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
UBA3-202ENST00000361055 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
UBA3-202ENST00000361055 TMEM132EQ6IEE7 984 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms