RNA–Protein interactions for RNA: ENST00000356994.6

SCRIB-202, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SCRIB, Length 5,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-202ENST00000356994 TAF3Q5VWG9 929 aa20.42■□□□□ 0.86
SCRIB-202ENST00000356994 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
SCRIB-202ENST00000356994 IGF1RP08069 1367 aa20.41■□□□□ 0.86
SCRIB-202ENST00000356994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.4■□□□□ 0.861e-6■■■■□ 25.2
SCRIB-202ENST00000356994 BCL2L13Q9BXK5 485 aa20.4■□□□□ 0.86
SCRIB-202ENST00000356994 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
SCRIB-202ENST00000356994 COG3Q96JB2 828 aa20.4■□□□□ 0.86
SCRIB-202ENST00000356994 SF3A1Q15459 793 aaKnown RBP20.4■□□□□ 0.86
SCRIB-202ENST00000356994 RUFY2Q8WXA3 655 aa20.4■□□□□ 0.86
SCRIB-202ENST00000356994 BRD2P25440 801 aaKnown RBP20.39■□□□□ 0.86
SCRIB-202ENST00000356994 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
SCRIB-202ENST00000356994 CHMP3Q9Y3E7 222 aa20.39■□□□□ 0.85
SCRIB-202ENST00000356994 HMGB1P09429 215 aaKnown RBP20.39■□□□□ 0.85
SCRIB-202ENST00000356994 SETQ01105 290 aaPredicted RBP20.38■□□□□ 0.85
SCRIB-202ENST00000356994 RILPL2Q969X0 211 aa20.38■□□□□ 0.85
SCRIB-202ENST00000356994 NUCB2P80303 420 aa20.37■□□□□ 0.85
SCRIB-202ENST00000356994 CCDC66A2RUB6 948 aa20.37■□□□□ 0.85
SCRIB-202ENST00000356994 GOLGA6L19H0YKK7 550 aa20.37■□□□□ 0.85
SCRIB-202ENST00000356994 H3BQV1 296 aa20.37■□□□□ 0.85
SCRIB-202ENST00000356994 IFFO2Q5TF58 517 aa20.37■□□□□ 0.85
SCRIB-202ENST00000356994 FYCO1Q9BQS8 1478 aa20.37■□□□□ 0.85
SCRIB-202ENST00000356994 TPM3P06753 285 aa20.37■□□□□ 0.85
SCRIB-202ENST00000356994 DIAPH1O60610 1272 aaKnown RBP20.36■□□□□ 0.85
SCRIB-202ENST00000356994 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
SCRIB-202ENST00000356994 NOC3LQ8WTT2 800 aaKnown RBP20.36■□□□□ 0.85
SCRIB-202ENST00000356994 PTPRGP23470 1445 aa20.36■□□□□ 0.85
SCRIB-202ENST00000356994 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
SCRIB-202ENST00000356994 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
SCRIB-202ENST00000356994 FAM184AQ8NB25 1140 aa20.35■□□□□ 0.85
SCRIB-202ENST00000356994 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
SCRIB-202ENST00000356994 CLSTN1O94985 981 aa20.34■□□□□ 0.85
SCRIB-202ENST00000356994 LRRFIP1Q32MZ4 808 aaKnown RBP20.34■□□□□ 0.85
SCRIB-202ENST00000356994 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.85
SCRIB-202ENST00000356994 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.85
SCRIB-202ENST00000356994 TMX4Q9H1E5 349 aaPredicted RBP20.33■□□□□ 0.85
SCRIB-202ENST00000356994 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.85
SCRIB-202ENST00000356994 BRPF3Q9ULD4 1205 aa20.33■□□□□ 0.85
SCRIB-202ENST00000356994 BECN2A8MW95 431 aa20.33■□□□□ 0.84
SCRIB-202ENST00000356994 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
SCRIB-202ENST00000356994 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
SCRIB-202ENST00000356994 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
SCRIB-202ENST00000356994 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
SCRIB-202ENST00000356994 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.32■□□□□ 0.84
SCRIB-202ENST00000356994 ZNF330Q9Y3S2 320 aaPredicted RBP20.32■□□□□ 0.84
SCRIB-202ENST00000356994 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
SCRIB-202ENST00000356994 ELL2O00472 640 aaPredicted RBP20.31■□□□□ 0.84
SCRIB-202ENST00000356994 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
SCRIB-202ENST00000356994 RIPK4P57078 832 aa20.3■□□□□ 0.84
SCRIB-202ENST00000356994 RASSF8Q8NHQ8 419 aa20.3■□□□□ 0.84
SCRIB-202ENST00000356994 C22orf23Q9BZE7 217 aa20.3■□□□□ 0.84
SCRIB-202ENST00000356994 GNAI1P63096 354 aa20.29■□□□□ 0.84
SCRIB-202ENST00000356994 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
SCRIB-202ENST00000356994 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
SCRIB-202ENST00000356994 MRE11P49959 708 aa20.27■□□□□ 0.84
SCRIB-202ENST00000356994 CPLX2Q6PUV4 134 aaKnown RBP20.27■□□□□ 0.84
SCRIB-202ENST00000356994 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.84
SCRIB-202ENST00000356994 IRX3P78415 501 aaPredicted RBP20.27■□□□□ 0.83
SCRIB-202ENST00000356994 GPS2Q13227 327 aa20.26■□□□□ 0.83
SCRIB-202ENST00000356994 TPM1P09493 284 aa20.26■□□□□ 0.83
SCRIB-202ENST00000356994 RNF20Q5VTR2 975 aa20.26■□□□□ 0.83
SCRIB-202ENST00000356994 HSP90AB4PQ58FF6 505 aa20.25■□□□□ 0.83
SCRIB-202ENST00000356994 TSR1Q2NL82 804 aaKnown RBP20.25■□□□□ 0.83
SCRIB-202ENST00000356994 C1orf141Q5JVX7 400 aa20.25■□□□□ 0.83
SCRIB-202ENST00000356994 NEXNQ0ZGT2 675 aa20.25■□□□□ 0.83
SCRIB-202ENST00000356994 TEFQ10587 303 aa20.23■□□□□ 0.83
SCRIB-202ENST00000356994 LTV1Q96GA3 475 aaPredicted RBP20.23■□□□□ 0.83
SCRIB-202ENST00000356994 CCDC9Q9Y3X0 531 aaKnown RBP20.23■□□□□ 0.83
SCRIB-202ENST00000356994 CDC45O75419 566 aa20.23■□□□□ 0.83
SCRIB-202ENST00000356994 TPD52L1Q16890 204 aaPredicted RBP20.22■□□□□ 0.83
SCRIB-202ENST00000356994 TOMM22Q9NS69 142 aa20.22■□□□□ 0.83
SCRIB-202ENST00000356994 AEBP1Q8IUX7 1158 aa20.21■□□□□ 0.83
SCRIB-202ENST00000356994 NOM1Q5C9Z4 860 aaKnown RBP20.21■□□□□ 0.83
SCRIB-202ENST00000356994 SYNE3Q6ZMZ3 975 aa20.21■□□□□ 0.83
SCRIB-202ENST00000356994 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
SCRIB-202ENST00000356994 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
SCRIB-202ENST00000356994 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
SCRIB-202ENST00000356994 SCAPERQ9BY12 1400 aa20.2■□□□□ 0.82
SCRIB-202ENST00000356994 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
SCRIB-202ENST00000356994 ANO2Q9NQ90 1003 aa20.2■□□□□ 0.82
SCRIB-202ENST00000356994 C9orf78Q9NZ63 289 aaPredicted RBP20.2■□□□□ 0.82
SCRIB-202ENST00000356994 AKAP17AQ02040 695 aaKnown RBP20.2■□□□□ 0.82
SCRIB-202ENST00000356994 PDE3AQ14432 1141 aa20.2■□□□□ 0.82
SCRIB-202ENST00000356994 CCDC70Q6NSX1 233 aa20.2■□□□□ 0.82
SCRIB-202ENST00000356994 SMC3Q9UQE7 1217 aa20.19■□□□□ 0.82
SCRIB-202ENST00000356994 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
SCRIB-202ENST00000356994 HOOK1Q9UJC3 728 aaKnown RBP20.18■□□□□ 0.82
SCRIB-202ENST00000356994 ERC2O15083 957 aa20.18■□□□□ 0.82
SCRIB-202ENST00000356994 LNPKQ9C0E8 428 aa20.17■□□□□ 0.82
SCRIB-202ENST00000356994 ADAMTS8Q9UP79 889 aa20.17■□□□□ 0.82
SCRIB-202ENST00000356994 TRIM29Q14134 588 aa20.17■□□□□ 0.82
SCRIB-202ENST00000356994 CREBRFQ8IUR6 639 aa20.17■□□□□ 0.82
SCRIB-202ENST00000356994 HFM1A2PYH4 1435 aa20.17■□□□□ 0.82
SCRIB-202ENST00000356994 MCTP1Q6DN14 999 aa20.17■□□□□ 0.82
SCRIB-202ENST00000356994 CCDC39Q9UFE4 941 aa20.17■□□□□ 0.82
SCRIB-202ENST00000356994 EFCAB5A4FU69 1503 aa20.16■□□□□ 0.82
SCRIB-202ENST00000356994 PDCL3Q9H2J4 239 aa20.16■□□□□ 0.82
SCRIB-202ENST00000356994 PANK1Q8TE04 598 aa20.16■□□□□ 0.82
SCRIB-202ENST00000356994 SMG6Q86US8 1419 aaKnown RBP20.16■□□□□ 0.82
SCRIB-202ENST00000356994 FOXD4L6Q3SYB3 417 aaPredicted RBP20.15■□□□□ 0.82
SCRIB-202ENST00000356994 FOXD4L3Q6VB84 417 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms