RNA–Protein interactions for RNA: ENST00000356994.6

SCRIB-202, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SCRIB, Length 5,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-202ENST00000356994 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.07
SCRIB-202ENST00000356994 MYT1Q01538 1121 aa27.85■■■□□ 2.05
SCRIB-202ENST00000356994 PELP1Q8IZL8 1130 aaKnown RBP27.68■■■□□ 2.02
SCRIB-202ENST00000356994 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
SCRIB-202ENST00000356994 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
SCRIB-202ENST00000356994 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
SCRIB-202ENST00000356994 APLP2Q06481 763 aa25.85■■□□□ 1.73
SCRIB-202ENST00000356994 TTBK1Q5TCY1 1321 aaPredicted RBP25.82■■□□□ 1.72
SCRIB-202ENST00000356994 EHMT2Q96KQ7 1210 aa25.81■■□□□ 1.72
SCRIB-202ENST00000356994 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
SCRIB-202ENST00000356994 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.69
SCRIB-202ENST00000356994 ERICH6Q7L0X2 663 aa25.49■■□□□ 1.67
SCRIB-202ENST00000356994 CENPBP07199 599 aaPredicted RBP25.49■■□□□ 1.67
SCRIB-202ENST00000356994 FAM9AQ8IZU1 332 aaPredicted RBP25.41■■□□□ 1.66
SCRIB-202ENST00000356994 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
SCRIB-202ENST00000356994 CCER1Q8TC90 406 aaPredicted RBP25.17■■□□□ 1.62
SCRIB-202ENST00000356994 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
SCRIB-202ENST00000356994 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
SCRIB-202ENST00000356994 NEFLP07196 543 aa24.76■■□□□ 1.55
SCRIB-202ENST00000356994 HRCP23327 699 aa24.7■■□□□ 1.54
SCRIB-202ENST00000356994 RANGAP1P46060 587 aaPredicted RBP24.69■■□□□ 1.54
SCRIB-202ENST00000356994 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
SCRIB-202ENST00000356994 YTHDC1Q96MU7 727 aaKnown RBP24.52■■□□□ 1.52
SCRIB-202ENST00000356994 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
SCRIB-202ENST00000356994 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
SCRIB-202ENST00000356994 LOC105371045A0A1W2PR82 267 aa24.13■■□□□ 1.45
SCRIB-202ENST00000356994 DAXXQ9UER7 740 aaPredicted RBP23.93■■□□□ 1.42
SCRIB-202ENST00000356994 HNRNPUL2Q1KMD3 747 aaKnown RBP23.92■■□□□ 1.42
SCRIB-202ENST00000356994 DIEXFQ68CQ4 756 aaKnown RBP23.88■■□□□ 1.41
SCRIB-202ENST00000356994 ITGAEP38570 1179 aa23.88■■□□□ 1.41
SCRIB-202ENST00000356994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.75■■□□□ 1.39
SCRIB-202ENST00000356994 GLIPR1L2Q4G1C9 344 aa23.73■■□□□ 1.39
SCRIB-202ENST00000356994 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
SCRIB-202ENST00000356994 SLC24A1O60721 1099 aa23.66■■□□□ 1.38
SCRIB-202ENST00000356994 BCL11AQ9H165 835 aa23.63■■□□□ 1.37
SCRIB-202ENST00000356994 RTL5Q5HYW3 569 aaPredicted RBP23.61■■□□□ 1.37
SCRIB-202ENST00000356994 GTF3C3Q9Y5Q9 886 aa23.54■■□□□ 1.36
SCRIB-202ENST00000356994 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
SCRIB-202ENST00000356994 EIF5BO60841 1220 aaKnown RBP23.46■■□□□ 1.35
SCRIB-202ENST00000356994 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
SCRIB-202ENST00000356994 ZNF316A6NFI3 1004 aaPredicted RBP23.39■■□□□ 1.33
SCRIB-202ENST00000356994 ANP32CO43423 234 aa23.33■■□□□ 1.33
SCRIB-202ENST00000356994 CNGB1Q14028 1251 aaPredicted RBP23.3■■□□□ 1.32
SCRIB-202ENST00000356994 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
SCRIB-202ENST00000356994 TRIM52Q96A61 297 aa23.26■■□□□ 1.31
SCRIB-202ENST00000356994 ACIN1Q9UKV3 1341 aaKnown RBP23.25■■□□□ 1.31
SCRIB-202ENST00000356994 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
SCRIB-202ENST00000356994 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
SCRIB-202ENST00000356994 DCAF1Q9Y4B6 1507 aa23.14■■□□□ 1.29
SCRIB-202ENST00000356994 BCANQ96GW7 911 aa23.12■■□□□ 1.29
SCRIB-202ENST00000356994 SLC4A1APQ9BWU0 796 aaKnown RBP23.11■■□□□ 1.29
SCRIB-202ENST00000356994 PRKCSHP14314 528 aaPredicted RBP23.11■■□□□ 1.29
SCRIB-202ENST00000356994 CSRNP3Q8WYN3 585 aa23.08■■□□□ 1.29
SCRIB-202ENST00000356994 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.29
SCRIB-202ENST00000356994 ABCC9O60706 1549 aa23.06■■□□□ 1.28
SCRIB-202ENST00000356994 ANP32EQ9BTT0 268 aa23.05■■□□□ 1.28
SCRIB-202ENST00000356994 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.274e-7■■□□□ 14.5
SCRIB-202ENST00000356994 ZNF326Q5BKZ1 582 aaKnown RBP22.88■■□□□ 1.25
SCRIB-202ENST00000356994 ANP32AP39687 249 aaKnown RBP22.86■■□□□ 1.25
SCRIB-202ENST00000356994 ZBTB47Q9UFB7 747 aaPredicted RBP22.84■■□□□ 1.25
SCRIB-202ENST00000356994 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
SCRIB-202ENST00000356994 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
SCRIB-202ENST00000356994 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
SCRIB-202ENST00000356994 FKBP8Q14318 412 aa22.67■■□□□ 1.22
SCRIB-202ENST00000356994 NEFMP07197 916 aa22.65■■□□□ 1.22
SCRIB-202ENST00000356994 P3H3Q8IVL6 736 aa22.62■■□□□ 1.21
SCRIB-202ENST00000356994 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
SCRIB-202ENST00000356994 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
SCRIB-202ENST00000356994 FBLN2P98095 1184 aa22.51■■□□□ 1.19
SCRIB-202ENST00000356994 DDX10Q13206 875 aaKnown RBP22.5■■□□□ 1.19
SCRIB-202ENST00000356994 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
SCRIB-202ENST00000356994 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
SCRIB-202ENST00000356994 ZNF777Q9ULD5 760 aaPredicted RBP22.44■■□□□ 1.18
SCRIB-202ENST00000356994 UPF2Q9HAU5 1272 aaKnown RBP22.42■■□□□ 1.18
SCRIB-202ENST00000356994 ANP32BQ92688 251 aaKnown RBP22.41■■□□□ 1.18
SCRIB-202ENST00000356994 EEA1Q15075 1411 aa22.41■■□□□ 1.18
SCRIB-202ENST00000356994 FAM9BQ8IZU0 186 aa22.38■■□□□ 1.17
SCRIB-202ENST00000356994 PODXL2Q9NZ53 605 aa22.37■■□□□ 1.17
SCRIB-202ENST00000356994 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
SCRIB-202ENST00000356994 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
SCRIB-202ENST00000356994 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
SCRIB-202ENST00000356994 CLIP1P30622 1438 aa22.34■■□□□ 1.17
SCRIB-202ENST00000356994 MIER1Q8N108 512 aa22.33■■□□□ 1.17
SCRIB-202ENST00000356994 TMC1Q8TDI8 760 aa22.32■■□□□ 1.16
SCRIB-202ENST00000356994 HSP90AA1P07900 732 aaKnown RBP22.26■■□□□ 1.15
SCRIB-202ENST00000356994 MRS2Q9HD23 443 aa22.26■■□□□ 1.15
SCRIB-202ENST00000356994 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
SCRIB-202ENST00000356994 MYO15BQ96JP2 1530 aa22.22■■□□□ 1.15
SCRIB-202ENST00000356994 TNNT2P45379 298 aaPredicted RBP22.22■■□□□ 1.15
SCRIB-202ENST00000356994 NBR1Q14596 966 aa22.22■■□□□ 1.15
SCRIB-202ENST00000356994 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
SCRIB-202ENST00000356994 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
SCRIB-202ENST00000356994 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
SCRIB-202ENST00000356994 WDR43Q15061 677 aaKnown RBP eCLIP22.17■■□□□ 1.14
SCRIB-202ENST00000356994 CHIC2Q9UKJ5 165 aa22.14■■□□□ 1.14
SCRIB-202ENST00000356994 PKNOX2Q96KN3 472 aa22.14■■□□□ 1.13
SCRIB-202ENST00000356994 ERICH6BQ5W0A0 696 aa22.14■■□□□ 1.13
SCRIB-202ENST00000356994 RSF1Q96T23 1441 aaPredicted RBP22.12■■□□□ 1.13
SCRIB-202ENST00000356994 ESF1Q9H501 851 aaKnown RBP22.12■■□□□ 1.13
SCRIB-202ENST00000356994 RTN4Q9NQC3 1192 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms