RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 RAPGEF3O95398 923 aa10.75□□□□□ -0.69
C11orf54-202ENST00000354421 ANP32EQ9BTT0 268 aa10.75□□□□□ -0.69
C11orf54-202ENST00000354421 KDM5BQ9UGL1 1544 aa10.74□□□□□ -0.69
C11orf54-202ENST00000354421 SENP3-EIF4A1A0A087X0R7 540 aa10.74□□□□□ -0.69
C11orf54-202ENST00000354421 CEBPAP49715 358 aaPredicted RBP10.74□□□□□ -0.69
C11orf54-202ENST00000354421 PHLDB1Q86UU1 1377 aa10.73□□□□□ -0.69
C11orf54-202ENST00000354421 SETBP1Q9Y6X0 1596 aa10.73□□□□□ -0.69
C11orf54-202ENST00000354421 YY1P25490 414 aa10.72□□□□□ -0.69
C11orf54-202ENST00000354421 KIAA0556O60303 1618 aa10.72□□□□□ -0.69
C11orf54-202ENST00000354421 FANCAO15360 1455 aa10.71□□□□□ -0.69
C11orf54-202ENST00000354421 WDR7Q9Y4E6 1490 aa10.71□□□□□ -0.69
C11orf54-202ENST00000354421 PTPRKQ15262 1439 aa10.71□□□□□ -0.69
C11orf54-202ENST00000354421 KANK4Q5T7N3 995 aaPredicted RBP10.71□□□□□ -0.69
C11orf54-202ENST00000354421 CUX1P39880 1505 aa10.7□□□□□ -0.7
C11orf54-202ENST00000354421 ARSIQ5FYB1 569 aa10.7□□□□□ -0.7
C11orf54-202ENST00000354421 UACAQ9BZF9 1416 aa10.7□□□□□ -0.7
C11orf54-202ENST00000354421 CCNB3Q8WWL7 1395 aa10.7□□□□□ -0.7
C11orf54-202ENST00000354421 SETD1BQ9UPS6 1966 aaKnown RBP10.69□□□□□ -0.7
C11orf54-202ENST00000354421 FER1L4A9Z1Z3 1794 aa10.69□□□□□ -0.7
C11orf54-202ENST00000354421 MLECQ14165 292 aa10.69□□□□□ -0.7
C11orf54-202ENST00000354421 FBXO22Q8NEZ5 403 aa10.67□□□□□ -0.7
C11orf54-202ENST00000354421 TRIM52Q96A61 297 aa10.67□□□□□ -0.7
C11orf54-202ENST00000354421 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
C11orf54-202ENST00000354421 ARHGEF40Q8TER5 1519 aa10.66□□□□□ -0.7
C11orf54-202ENST00000354421 BCL11BQ9C0K0 894 aaPredicted RBP10.66□□□□□ -0.7
C11orf54-202ENST00000354421 NCKAP5LQ9HCH0 1330 aa10.65□□□□□ -0.7
C11orf54-202ENST00000354421 ALKQ9UM73 1620 aa10.65□□□□□ -0.7
C11orf54-202ENST00000354421 ANKRD13DQ6ZTN6 518 aa10.65□□□□□ -0.7
C11orf54-202ENST00000354421 KCNH8Q96L42 1107 aa10.65□□□□□ -0.7
C11orf54-202ENST00000354421 HCSTQ9UBK5 93 aa10.65□□□□□ -0.7
C11orf54-202ENST00000354421 ZCCHC11Q5TAX3 1644 aaKnown RBP10.65□□□□□ -0.7
C11orf54-202ENST00000354421 ARHGAP35Q9NRY4 1499 aa10.64□□□□□ -0.71
C11orf54-202ENST00000354421 PBX2P40425 430 aa10.64□□□□□ -0.71
C11orf54-202ENST00000354421 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
C11orf54-202ENST00000354421 KIF27Q86VH2 1401 aa10.63□□□□□ -0.71
C11orf54-202ENST00000354421 RAB3GAP2Q9H2M9 1393 aa10.63□□□□□ -0.71
C11orf54-202ENST00000354421 IRX2Q9BZI1 471 aaPredicted RBP10.63□□□□□ -0.71
C11orf54-202ENST00000354421 STK24Q9Y6E0 443 aa10.63□□□□□ -0.71
C11orf54-202ENST00000354421 LSM11P83369 360 aaKnown RBP eCLIP10.62□□□□□ -0.71
C11orf54-202ENST00000354421 AKNAQ7Z591 1439 aa10.62□□□□□ -0.71
C11orf54-202ENST00000354421 CPS1P31327 1500 aa10.62□□□□□ -0.71
C11orf54-202ENST00000354421 TIMELESSQ9UNS1 1208 aa10.61□□□□□ -0.71
C11orf54-202ENST00000354421 FRMPD1Q5SYB0 1578 aa10.61□□□□□ -0.71
C11orf54-202ENST00000354421 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
C11orf54-202ENST00000354421 ARHGEF12Q9NZN5 1544 aa10.6□□□□□ -0.71
C11orf54-202ENST00000354421 KIF3CO14782 793 aa10.6□□□□□ -0.71
C11orf54-202ENST00000354421 RGS20O76081 388 aa10.6□□□□□ -0.71
C11orf54-202ENST00000354421 PKD2Q13563 968 aa10.6□□□□□ -0.71
C11orf54-202ENST00000354421 KHSRPQ92945 711 aaKnown RBP eCLIP10.6□□□□□ -0.719e-10■■■■□ 24.3
C11orf54-202ENST00000354421 TIAM1Q13009 1591 aa10.6□□□□□ -0.71
C11orf54-202ENST00000354421 CAMSAP1Q5T5Y3 1602 aa10.6□□□□□ -0.71
C11orf54-202ENST00000354421 CCER2I3L3R5 266 aa10.59□□□□□ -0.71
C11orf54-202ENST00000354421 PPP1R15AO75807 674 aaPredicted RBP10.59□□□□□ -0.71
C11orf54-202ENST00000354421 MFRPQ9BY79 579 aa10.59□□□□□ -0.71
C11orf54-202ENST00000354421 C2orf72A6NCS6 295 aa10.58□□□□□ -0.72
C11orf54-202ENST00000354421 CARMIL2Q6F5E8 1435 aa10.57□□□□□ -0.72
C11orf54-202ENST00000354421 STK25O00506 426 aa10.57□□□□□ -0.72
C11orf54-202ENST00000354421 LRP5O75197 1615 aa10.57□□□□□ -0.72
C11orf54-202ENST00000354421 SIGLEC1Q9BZZ2 1709 aa10.56□□□□□ -0.72
C11orf54-202ENST00000354421 BCL11AQ9H165 835 aa10.55□□□□□ -0.72
C11orf54-202ENST00000354421 NEO1Q92859 1461 aa10.55□□□□□ -0.72
C11orf54-202ENST00000354421 NEFLP07196 543 aa10.55□□□□□ -0.72
C11orf54-202ENST00000354421 NUDT7P0C024 238 aa10.55□□□□□ -0.72
C11orf54-202ENST00000354421 LRRC7Q96NW7 1537 aa10.54□□□□□ -0.72
C11orf54-202ENST00000354421 LRRC9Q6ZRR7 1453 aa10.54□□□□□ -0.72
C11orf54-202ENST00000354421 CDK12Q9NYV4 1490 aaPredicted RBP10.54□□□□□ -0.72
C11orf54-202ENST00000354421 RXRBP28702 533 aa10.54□□□□□ -0.72
C11orf54-202ENST00000354421 ZNF772Q68DY9 489 aaPredicted RBP10.54□□□□□ -0.72
C11orf54-202ENST00000354421 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
C11orf54-202ENST00000354421 TRAPPC8Q9Y2L5 1435 aa10.53□□□□□ -0.72
C11orf54-202ENST00000354421 DDX10Q13206 875 aaKnown RBP10.53□□□□□ -0.72
C11orf54-202ENST00000354421 RBM19Q9Y4C8 960 aaKnown RBP10.53□□□□□ -0.72
C11orf54-202ENST00000354421 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
C11orf54-202ENST00000354421 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
C11orf54-202ENST00000354421 BCANQ96GW7 911 aa10.53□□□□□ -0.72
C11orf54-202ENST00000354421 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
C11orf54-202ENST00000354421 SHANK2Q9UPX8 1470 aa10.52□□□□□ -0.73
C11orf54-202ENST00000354421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.73
C11orf54-202ENST00000354421 ITGAEP38570 1179 aa10.51□□□□□ -0.73
C11orf54-202ENST00000354421 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
C11orf54-202ENST00000354421 ECM2O94769 699 aaPredicted RBP10.5□□□□□ -0.73
C11orf54-202ENST00000354421 IGF1RP08069 1367 aa10.49□□□□□ -0.73
C11orf54-202ENST00000354421 ANP32CO43423 234 aa10.49□□□□□ -0.73
C11orf54-202ENST00000354421 SIN3AQ96ST3 1273 aa10.49□□□□□ -0.73
C11orf54-202ENST00000354421 PLA2R1Q13018 1463 aa10.48□□□□□ -0.73
C11orf54-202ENST00000354421 TCOF1Q13428 1488 aaKnown RBP10.48□□□□□ -0.73
C11orf54-202ENST00000354421 FHOD3Q2V2M9 1422 aa10.47□□□□□ -0.73
C11orf54-202ENST00000354421 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
C11orf54-202ENST00000354421 ZFYVE16Q7Z3T8 1539 aa10.46□□□□□ -0.73
C11orf54-202ENST00000354421 DENND4BO75064 1496 aaPredicted RBP10.46□□□□□ -0.74
C11orf54-202ENST00000354421 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
C11orf54-202ENST00000354421 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.74
C11orf54-202ENST00000354421 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
C11orf54-202ENST00000354421 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
C11orf54-202ENST00000354421 CARMIL1Q5VZK9 1371 aa10.45□□□□□ -0.74
C11orf54-202ENST00000354421 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
C11orf54-202ENST00000354421 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
C11orf54-202ENST00000354421 NUTM2BA6NNL0 878 aaPredicted RBP10.42□□□□□ -0.74
C11orf54-202ENST00000354421 NUTM2EB1AL46 878 aaPredicted RBP10.42□□□□□ -0.74
C11orf54-202ENST00000354421 TK2O00142 265 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms