RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 HECW2Q9P2P5 1572 aa23.87■■□□□ 1.41
CLSTN3-202ENST00000331148 NFKBIBQ15653 356 aa23.86■■□□□ 1.41
CLSTN3-202ENST00000331148 A2MP01023 1474 aa23.84■■□□□ 1.41
CLSTN3-202ENST00000331148 UHRF1BP1Q6BDS2 1440 aa23.84■■□□□ 1.41
CLSTN3-202ENST00000331148 KANK1Q14678 1352 aa23.84■■□□□ 1.41
CLSTN3-202ENST00000331148 UBE2Q2Q8WVN8 375 aa23.84■■□□□ 1.41
CLSTN3-202ENST00000331148 CCDC144AA2RUR9 1427 aa23.82■■□□□ 1.4
CLSTN3-202ENST00000331148 E9PCH4 1651 aa23.82■■□□□ 1.4
CLSTN3-202ENST00000331148 PLA2R1Q13018 1463 aa23.82■■□□□ 1.4
CLSTN3-202ENST00000331148 SKAP1Q86WV1 359 aa23.81■■□□□ 1.4
CLSTN3-202ENST00000331148 RICTORQ6R327 1708 aa23.81■■□□□ 1.4
CLSTN3-202ENST00000331148 FRAT1Q92837 279 aaPredicted RBP23.8■■□□□ 1.4
CLSTN3-202ENST00000331148 ATP10AO60312 1499 aa23.8■■□□□ 1.4
CLSTN3-202ENST00000331148 TSPOAP1O95153 1857 aa23.79■■□□□ 1.4
CLSTN3-202ENST00000331148 CARD11Q9BXL7 1154 aa23.79■■□□□ 1.4
CLSTN3-202ENST00000331148 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
CLSTN3-202ENST00000331148 VWDEQ8N2E2 1590 aa23.79■■□□□ 1.4
CLSTN3-202ENST00000331148 PLIN1O60240 522 aa23.77■■□□□ 1.4
CLSTN3-202ENST00000331148 NLRP13Q86W25 1043 aa23.77■■□□□ 1.4
CLSTN3-202ENST00000331148 CDCA7LQ96GN5 454 aa23.77■■□□□ 1.4
CLSTN3-202ENST00000331148 CRBNQ96SW2 442 aa23.77■■□□□ 1.4
CLSTN3-202ENST00000331148 ABCA6Q8N139 1617 aa23.77■■□□□ 1.4
CLSTN3-202ENST00000331148 MROH1Q8NDA8 1641 aa23.76■■□□□ 1.39
CLSTN3-202ENST00000331148 PPRC1Q5VV67 1664 aaKnown RBP23.76■■□□□ 1.39
CLSTN3-202ENST00000331148 TET3O43151 1660 aa23.76■■□□□ 1.39
CLSTN3-202ENST00000331148 FRMPD1Q5SYB0 1578 aa23.75■■□□□ 1.39
CLSTN3-202ENST00000331148 PARD3Q8TEW0 1356 aa23.75■■□□□ 1.39
CLSTN3-202ENST00000331148 SLC4A3P48751 1232 aa23.75■■□□□ 1.39
CLSTN3-202ENST00000331148 KIF13AQ9H1H9 1805 aa23.74■■□□□ 1.39
CLSTN3-202ENST00000331148 RNF17Q9BXT8 1623 aaKnown RBP23.74■■□□□ 1.39
CLSTN3-202ENST00000331148 ST20-MTHFSA0A0A6YYL1 179 aa23.73■■□□□ 1.39
CLSTN3-202ENST00000331148 DAXXQ9UER7 740 aaPredicted RBP23.72■■□□□ 1.39
CLSTN3-202ENST00000331148 DIP2CQ9Y2E4 1556 aa23.71■■□□□ 1.39
CLSTN3-202ENST00000331148 DCAF11Q8TEB1 546 aa23.71■■□□□ 1.39
CLSTN3-202ENST00000331148 KDM2BQ8NHM5 1336 aa23.7■■□□□ 1.38
CLSTN3-202ENST00000331148 GGT6Q6P531 493 aa23.68■■□□□ 1.38
CLSTN3-202ENST00000331148 KDM2AQ9Y2K7 1162 aa23.68■■□□□ 1.38
CLSTN3-202ENST00000331148 PTPRTO14522 1441 aa23.68■■□□□ 1.38
CLSTN3-202ENST00000331148 BLMP54132 1417 aaPredicted RBP23.68■■□□□ 1.38
CLSTN3-202ENST00000331148 ZMYM4Q5VZL5 1548 aa23.68■■□□□ 1.38
CLSTN3-202ENST00000331148 RGL3Q3MIN7 710 aa23.67■■□□□ 1.38
CLSTN3-202ENST00000331148 INSRP06213 1382 aa23.67■■□□□ 1.38
CLSTN3-202ENST00000331148 YEATS2Q9ULM3 1422 aa23.67■■□□□ 1.38
CLSTN3-202ENST00000331148 TRPM2O94759 1503 aa23.66■■□□□ 1.38
CLSTN3-202ENST00000331148 LMTK2Q8IWU2 1503 aa23.66■■□□□ 1.38
CLSTN3-202ENST00000331148 SPHKAPQ2M3C7 1700 aa23.66■■□□□ 1.38
CLSTN3-202ENST00000331148 EIF5BO60841 1220 aaKnown RBP23.66■■□□□ 1.38
CLSTN3-202ENST00000331148 FAM161AQ3B820 660 aa23.64■■□□□ 1.37
CLSTN3-202ENST00000331148 EFCAB6Q5THR3 1501 aa23.63■■□□□ 1.37
CLSTN3-202ENST00000331148 TRHP20396 242 aaPredicted RBP23.63■■□□□ 1.37
CLSTN3-202ENST00000331148 C20orf194Q5TEA3 1177 aa23.63■■□□□ 1.37
CLSTN3-202ENST00000331148 CENPQQ7L2Z9 268 aaPredicted RBP23.63■■□□□ 1.37
CLSTN3-202ENST00000331148 CEP152O94986 1710 aa23.62■■□□□ 1.37
CLSTN3-202ENST00000331148 C8orf34Q49A92 452 aa23.62■■□□□ 1.37
CLSTN3-202ENST00000331148 FRAT2O75474 233 aaPredicted RBP23.61■■□□□ 1.37
CLSTN3-202ENST00000331148 FAM43AQ8N2R8 423 aa23.61■■□□□ 1.37
CLSTN3-202ENST00000331148 RSPH6AQ9H0K4 717 aa23.58■■□□□ 1.37
CLSTN3-202ENST00000331148 PER1O15534 1290 aaPredicted RBP23.58■■□□□ 1.36
CLSTN3-202ENST00000331148 CLTCL1P53675 1640 aa23.57■■□□□ 1.36
CLSTN3-202ENST00000331148 PRAG1Q86YV5 1406 aa23.56■■□□□ 1.36
CLSTN3-202ENST00000331148 NEURL4Q96JN8 1562 aa23.56■■□□□ 1.36
CLSTN3-202ENST00000331148 ABCC3O15438 1527 aa23.55■■□□□ 1.36
CLSTN3-202ENST00000331148 ZC3H13Q5T200 1668 aaKnown RBP23.54■■□□□ 1.36
CLSTN3-202ENST00000331148 REREQ9P2R6 1566 aa23.54■■□□□ 1.36
CLSTN3-202ENST00000331148 COL17A1Q9UMD9 1497 aaPredicted RBP23.53■■□□□ 1.36
CLSTN3-202ENST00000331148 NPATQ14207 1427 aa23.53■■□□□ 1.36
CLSTN3-202ENST00000331148 CC2D1BQ5T0F9 858 aaKnown RBP23.5■■□□□ 1.35
CLSTN3-202ENST00000331148 STAC3Q96MF2 364 aa23.5■■□□□ 1.35
CLSTN3-202ENST00000331148 CAMSAP1Q5T5Y3 1602 aa23.49■■□□□ 1.35
CLSTN3-202ENST00000331148 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
CLSTN3-202ENST00000331148 UGGT1Q9NYU2 1555 aa23.48■■□□□ 1.35
CLSTN3-202ENST00000331148 CFAP65Q6ZU64 1925 aaKnown RBP23.47■■□□□ 1.35
CLSTN3-202ENST00000331148 KIF1BO60333 1816 aa23.46■■□□□ 1.35
CLSTN3-202ENST00000331148 AGLP35573 1532 aa23.46■■□□□ 1.35
CLSTN3-202ENST00000331148 RGS3P49796 1198 aa23.45■■□□□ 1.34
CLSTN3-202ENST00000331148 ARHGAP31Q2M1Z3 1444 aa23.45■■□□□ 1.34
CLSTN3-202ENST00000331148 DUSP27Q5VZP5 1158 aa23.44■■□□□ 1.34
CLSTN3-202ENST00000331148 LAMC1P11047 1609 aa23.43■■□□□ 1.34
CLSTN3-202ENST00000331148 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
CLSTN3-202ENST00000331148 GPRASP1Q5JY77 1395 aa23.42■■□□□ 1.34
CLSTN3-202ENST00000331148 DISP3Q9P2K9 1392 aa23.42■■□□□ 1.34
CLSTN3-202ENST00000331148 PLEKHH1Q9ULM0 1364 aa23.42■■□□□ 1.34
CLSTN3-202ENST00000331148 ARHGEF40Q8TER5 1519 aa23.42■■□□□ 1.34
CLSTN3-202ENST00000331148 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
CLSTN3-202ENST00000331148 NOS1P29475 1434 aa23.41■■□□□ 1.34
CLSTN3-202ENST00000331148 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.41■■□□□ 1.34
CLSTN3-202ENST00000331148 ADAMTS8Q9UP79 889 aa23.4■■□□□ 1.34
CLSTN3-202ENST00000331148 PANK3Q9H999 370 aa23.4■■□□□ 1.34
CLSTN3-202ENST00000331148 POGKQ9P215 609 aa23.39■■□□□ 1.34
CLSTN3-202ENST00000331148 SIGLEC1Q9BZZ2 1709 aa23.39■■□□□ 1.34
CLSTN3-202ENST00000331148 MADDQ8WXG6 1647 aa23.39■■□□□ 1.33
CLSTN3-202ENST00000331148 ZNF521Q96K83 1311 aa23.38■■□□□ 1.33
CLSTN3-202ENST00000331148 CHGAP10645 457 aaKnown RBP23.37■■□□□ 1.33
CLSTN3-202ENST00000331148 TESK2Q96S53 571 aa23.37■■□□□ 1.33
CLSTN3-202ENST00000331148 USP19O94966 1318 aa23.37■■□□□ 1.33
CLSTN3-202ENST00000331148 ADGRB3O60242 1522 aa23.36■■□□□ 1.33
CLSTN3-202ENST00000331148 EIF3AQ14152 1382 aaKnown RBP23.35■■□□□ 1.33
CLSTN3-202ENST00000331148 MROH2AA6NES4 1674 aa23.35■■□□□ 1.33
CLSTN3-202ENST00000331148 RRAGDQ9NQL2 400 aaPredicted RBP23.35■■□□□ 1.33
CLSTN3-202ENST00000331148 VIRMAQ69YN4 1812 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms