RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 E9PCH4 1651 aa25.13■■□□□ 1.61
HERPUD2-201ENST00000311350 CEBPAP49715 358 aaPredicted RBP25.12■■□□□ 1.61
HERPUD2-201ENST00000311350 BRPF3Q9ULD4 1205 aa25.11■■□□□ 1.61
HERPUD2-201ENST00000311350 RALBP1Q15311 655 aa25.11■■□□□ 1.61
HERPUD2-201ENST00000311350 CARD11Q9BXL7 1154 aa25.1■■□□□ 1.61
HERPUD2-201ENST00000311350 LMTK3Q96Q04 1460 aa25.1■■□□□ 1.61
HERPUD2-201ENST00000311350 PDE4AP27815 886 aa25.09■■□□□ 1.61
HERPUD2-201ENST00000311350 WASHC2CQ9Y4E1 1318 aa25.09■■□□□ 1.61
HERPUD2-201ENST00000311350 POLR3GLQ9BT43 218 aa25.09■■□□□ 1.61
HERPUD2-201ENST00000311350 MYBBP1AQ9BQG0 1328 aaKnown RBP25.07■■□□□ 1.6
HERPUD2-201ENST00000311350 ZNF326Q5BKZ1 582 aaKnown RBP25.07■■□□□ 1.6
HERPUD2-201ENST00000311350 EXOC6Q8TAG9 804 aa25.07■■□□□ 1.6
HERPUD2-201ENST00000311350 GGT6Q6P531 493 aa25.06■■□□□ 1.6
HERPUD2-201ENST00000311350 TMC1Q8TDI8 760 aa25.06■■□□□ 1.6
HERPUD2-201ENST00000311350 USP35Q9P2H5 1018 aa25.05■■□□□ 1.6
HERPUD2-201ENST00000311350 MAST1Q9Y2H9 1570 aa25.03■■□□□ 1.6
HERPUD2-201ENST00000311350 LAMC1P11047 1609 aa25.02■■□□□ 1.6
HERPUD2-201ENST00000311350 INSRP06213 1382 aa25.02■■□□□ 1.6
HERPUD2-201ENST00000311350 BACH2Q9BYV9 841 aa25.02■■□□□ 1.6
HERPUD2-201ENST00000311350 FAM135AQ9P2D6 1515 aa25.01■■□□□ 1.59
HERPUD2-201ENST00000311350 PPP6R1Q9UPN7 881 aa25.01■■□□□ 1.59
HERPUD2-201ENST00000311350 TCERG1O14776 1098 aaKnown RBP25.01■■□□□ 1.59
HERPUD2-201ENST00000311350 C3P01024 1663 aa25■■□□□ 1.59
HERPUD2-201ENST00000311350 KIF3BO15066 747 aa25■■□□□ 1.59
HERPUD2-201ENST00000311350 SKAP1Q86WV1 359 aa25■■□□□ 1.59
HERPUD2-201ENST00000311350 TRPM1Q7Z4N2 1603 aa25■■□□□ 1.59
HERPUD2-201ENST00000311350 GPRASP1Q5JY77 1395 aa24.99■■□□□ 1.59
HERPUD2-201ENST00000311350 ST20-MTHFSA0A0A6YYL1 179 aa24.99■■□□□ 1.59
HERPUD2-201ENST00000311350 ZMYM3Q14202 1370 aa24.99■■□□□ 1.59
HERPUD2-201ENST00000311350 PRAG1Q86YV5 1406 aa24.99■■□□□ 1.59
HERPUD2-201ENST00000311350 HSPA2P54652 639 aa24.98■■□□□ 1.59
HERPUD2-201ENST00000311350 UBE2Q2Q8WVN8 375 aa24.98■■□□□ 1.59
HERPUD2-201ENST00000311350 UNC13BO14795 1591 aa24.97■■□□□ 1.59
HERPUD2-201ENST00000311350 MROH2AA6NES4 1674 aa24.97■■□□□ 1.59
HERPUD2-201ENST00000311350 PPM1GO15355 546 aaPredicted RBP24.96■■□□□ 1.59
HERPUD2-201ENST00000311350 RRP1P56182 461 aaKnown RBP24.96■■□□□ 1.59
HERPUD2-201ENST00000311350 PARD3Q8TEW0 1356 aa24.96■■□□□ 1.59
HERPUD2-201ENST00000311350 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
HERPUD2-201ENST00000311350 PDE3BQ13370 1112 aa24.95■■□□□ 1.58
HERPUD2-201ENST00000311350 CLTCQ00610 1675 aaKnown RBP24.94■■□□□ 1.58
HERPUD2-201ENST00000311350 DCAF11Q8TEB1 546 aa24.94■■□□□ 1.58
HERPUD2-201ENST00000311350 EIF5BO60841 1220 aaKnown RBP24.93■■□□□ 1.58
HERPUD2-201ENST00000311350 GSE1Q14687 1217 aa24.92■■□□□ 1.58
HERPUD2-201ENST00000311350 NLRP13Q86W25 1043 aa24.92■■□□□ 1.58
HERPUD2-201ENST00000311350 SLC4A3P48751 1232 aa24.92■■□□□ 1.58
HERPUD2-201ENST00000311350 NPATQ14207 1427 aa24.92■■□□□ 1.58
HERPUD2-201ENST00000311350 CCDC144AA2RUR9 1427 aa24.91■■□□□ 1.58
HERPUD2-201ENST00000311350 SETD1BQ9UPS6 1966 aaKnown RBP24.9■■□□□ 1.58
HERPUD2-201ENST00000311350 EIF2AK4Q9P2K8 1649 aaKnown RBP24.89■■□□□ 1.58
HERPUD2-201ENST00000311350 KDM2AQ9Y2K7 1162 aa24.89■■□□□ 1.57
HERPUD2-201ENST00000311350 PRDM15P57071 1507 aaPredicted RBP24.89■■□□□ 1.57
HERPUD2-201ENST00000311350 DUOX2Q9NRD8 1548 aa24.88■■□□□ 1.57
HERPUD2-201ENST00000311350 FRAT1Q92837 279 aaPredicted RBP24.88■■□□□ 1.57
HERPUD2-201ENST00000311350 NFKBIBQ15653 356 aa24.87■■□□□ 1.57
HERPUD2-201ENST00000311350 IQGAP3Q86VI3 1631 aa24.87■■□□□ 1.57
HERPUD2-201ENST00000311350 RCAN3Q9UKA8 241 aa24.86■■□□□ 1.57
HERPUD2-201ENST00000311350 PLA2R1Q13018 1463 aa24.85■■□□□ 1.57
HERPUD2-201ENST00000311350 MS4A1P11836 297 aa24.85■■□□□ 1.57
HERPUD2-201ENST00000311350 PER1O15534 1290 aaPredicted RBP24.83■■□□□ 1.57
HERPUD2-201ENST00000311350 RNF17Q9BXT8 1623 aaKnown RBP24.83■■□□□ 1.57
HERPUD2-201ENST00000311350 ERBINQ96RT1 1412 aa24.81■■□□□ 1.56
HERPUD2-201ENST00000311350 PLIN1O60240 522 aa24.81■■□□□ 1.56
HERPUD2-201ENST00000311350 BLMP54132 1417 aaPredicted RBP24.8■■□□□ 1.56
HERPUD2-201ENST00000311350 MROH1Q8NDA8 1641 aa24.76■■□□□ 1.55
HERPUD2-201ENST00000311350 ABCC3O15438 1527 aa24.76■■□□□ 1.55
HERPUD2-201ENST00000311350 FBXO31Q5XUX0 539 aaPredicted RBP24.75■■□□□ 1.55
HERPUD2-201ENST00000311350 TESK2Q96S53 571 aa24.75■■□□□ 1.55
HERPUD2-201ENST00000311350 CDCA7LQ96GN5 454 aa24.75■■□□□ 1.55
HERPUD2-201ENST00000311350 DDRGK1Q96HY6 314 aa24.75■■□□□ 1.55
HERPUD2-201ENST00000311350 MYO3AQ8NEV4 1616 aa24.74■■□□□ 1.55
HERPUD2-201ENST00000311350 ZC3H13Q5T200 1668 aaKnown RBP24.73■■□□□ 1.55
HERPUD2-201ENST00000311350 TNRQ92752 1358 aa24.72■■□□□ 1.55
HERPUD2-201ENST00000311350 NBPF1Q3BBV0 1214 aa24.71■■□□□ 1.55
HERPUD2-201ENST00000311350 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
HERPUD2-201ENST00000311350 DISP3Q9P2K9 1392 aa24.7■■□□□ 1.54
HERPUD2-201ENST00000311350 CEP170BQ9Y4F5 1589 aaPredicted RBP24.7■■□□□ 1.54
HERPUD2-201ENST00000311350 CRBNQ96SW2 442 aa24.7■■□□□ 1.54
HERPUD2-201ENST00000311350 STRCQ7RTU9 1775 aa24.69■■□□□ 1.54
HERPUD2-201ENST00000311350 ZNF142P52746 1687 aaPredicted RBP24.69■■□□□ 1.54
HERPUD2-201ENST00000311350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.69■■□□□ 1.54
HERPUD2-201ENST00000311350 TMF1P82094 1093 aa24.68■■□□□ 1.54
HERPUD2-201ENST00000311350 CAMSAP1Q5T5Y3 1602 aa24.67■■□□□ 1.54
HERPUD2-201ENST00000311350 FRAT2O75474 233 aaPredicted RBP24.67■■□□□ 1.54
HERPUD2-201ENST00000311350 A2ML1A8K2U0 1454 aa24.67■■□□□ 1.54
HERPUD2-201ENST00000311350 DEPDC5O75140 1603 aa24.66■■□□□ 1.54
HERPUD2-201ENST00000311350 KANK1Q14678 1352 aa24.66■■□□□ 1.54
HERPUD2-201ENST00000311350 CEP152O94986 1710 aa24.64■■□□□ 1.53
HERPUD2-201ENST00000311350 RGL3Q3MIN7 710 aa24.63■■□□□ 1.53
HERPUD2-201ENST00000311350 STAC3Q96MF2 364 aa24.63■■□□□ 1.53
HERPUD2-201ENST00000311350 DAXXQ9UER7 740 aaPredicted RBP24.63■■□□□ 1.53
HERPUD2-201ENST00000311350 PANK3Q9H999 370 aa24.62■■□□□ 1.53
HERPUD2-201ENST00000311350 PTPRTO14522 1441 aa24.62■■□□□ 1.53
HERPUD2-201ENST00000311350 ERVK-7P63135 1459 aa24.62■■□□□ 1.53
HERPUD2-201ENST00000311350 NLRP1Q9C000 1473 aa24.62■■□□□ 1.53
HERPUD2-201ENST00000311350 C20orf194Q5TEA3 1177 aa24.61■■□□□ 1.53
HERPUD2-201ENST00000311350 ARHGAP31Q2M1Z3 1444 aa24.61■■□□□ 1.53
HERPUD2-201ENST00000311350 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
HERPUD2-201ENST00000311350 NCKAP5LQ9HCH0 1330 aa24.59■■□□□ 1.53
HERPUD2-201ENST00000311350 IQGAP1P46940 1657 aa24.59■■□□□ 1.53
HERPUD2-201ENST00000311350 VWDEQ8N2E2 1590 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms