RNA–Protein interactions for RNA: ENST00000261523.9

RORA-201, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-201ENST00000261523 UGGT1Q9NYU2 1555 aa9.66□□□□□ -0.86
RORA-201ENST00000261523 LTBP4Q8N2S1 1624 aa9.65□□□□□ -0.86
RORA-201ENST00000261523 NCBP3Q53F19 620 aaKnown RBP9.65□□□□□ -0.86
RORA-201ENST00000261523 THEMISQ8N1K5 641 aaPredicted RBP9.65□□□□□ -0.86
RORA-201ENST00000261523 LMTK2Q8IWU2 1503 aa9.65□□□□□ -0.86
RORA-201ENST00000261523 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
RORA-201ENST00000261523 FBXO31Q5XUX0 539 aaPredicted RBP9.64□□□□□ -0.87
RORA-201ENST00000261523 MPHOSPH9Q99550 1183 aa9.64□□□□□ -0.87
RORA-201ENST00000261523 VWDEQ8N2E2 1590 aa9.64□□□□□ -0.87
RORA-201ENST00000261523 KDM5AP29375 1690 aaKnown RBP9.64□□□□□ -0.87
RORA-201ENST00000261523 NCKAP5LQ9HCH0 1330 aa9.63□□□□□ -0.87
RORA-201ENST00000261523 NEURL4Q96JN8 1562 aa9.63□□□□□ -0.87
RORA-201ENST00000261523 MED14O60244 1454 aa9.63□□□□□ -0.87
RORA-201ENST00000261523 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
RORA-201ENST00000261523 ANKLE2Q86XL3 938 aa9.63□□□□□ -0.87
RORA-201ENST00000261523 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
RORA-201ENST00000261523 CFAP65Q6ZU64 1925 aaKnown RBP9.62□□□□□ -0.87
RORA-201ENST00000261523 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
RORA-201ENST00000261523 C11orf95C9JLR9 678 aaPredicted RBP9.62□□□□□ -0.87
RORA-201ENST00000261523 CCDC184Q52MB2 194 aa9.62□□□□□ -0.87
RORA-201ENST00000261523 CCDC7Q96M83 1385 aa9.61□□□□□ -0.87
RORA-201ENST00000261523 CPS1P31327 1500 aa9.61□□□□□ -0.87
RORA-201ENST00000261523 EFCAB6Q5THR3 1501 aa9.61□□□□□ -0.87
RORA-201ENST00000261523 ANKRD50Q9ULJ7 1429 aa9.61□□□□□ -0.87
RORA-201ENST00000261523 RPRD2Q5VT52 1461 aaKnown RBP9.61□□□□□ -0.87
RORA-201ENST00000261523 ROCK1Q13464 1354 aa9.61□□□□□ -0.87
RORA-201ENST00000261523 ANKRD30BQ9BXX2 1392 aa9.61□□□□□ -0.87
RORA-201ENST00000261523 IQGAP1P46940 1657 aa9.61□□□□□ -0.87
RORA-201ENST00000261523 NPM3O75607 178 aaKnown RBP9.59□□□□□ -0.87
RORA-201ENST00000261523 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
RORA-201ENST00000261523 NBPF8Q3BBV2 869 aa9.59□□□□□ -0.87
RORA-201ENST00000261523 TET3O43151 1660 aa9.59□□□□□ -0.87
RORA-201ENST00000261523 SLIT1O75093 1534 aa9.59□□□□□ -0.87
RORA-201ENST00000261523 UNC13BO14795 1591 aa9.59□□□□□ -0.87
RORA-201ENST00000261523 NPHP4O75161 1426 aaPredicted RBP9.59□□□□□ -0.87
RORA-201ENST00000261523 ZNF335Q9H4Z2 1342 aaPredicted RBP9.59□□□□□ -0.87
RORA-201ENST00000261523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.58□□□□□ -0.882e-6■■□□□ 13.8
RORA-201ENST00000261523 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
RORA-201ENST00000261523 SPATA31E1Q6ZUB1 1445 aa9.58□□□□□ -0.88
RORA-201ENST00000261523 SCAF11Q99590 1463 aaKnown RBP9.58□□□□□ -0.88
RORA-201ENST00000261523 ARHGAP23Q9P227 1491 aa9.58□□□□□ -0.88
RORA-201ENST00000261523 PIK3C2BO00750 1634 aa9.57□□□□□ -0.88
RORA-201ENST00000261523 SYNMO15061 1565 aa9.56□□□□□ -0.88
RORA-201ENST00000261523 ERICH6BQ5W0A0 696 aa9.56□□□□□ -0.88
RORA-201ENST00000261523 NOS1P29475 1434 aa9.56□□□□□ -0.88
RORA-201ENST00000261523 EID1Q9Y6B2 187 aa9.55□□□□□ -0.88
RORA-201ENST00000261523 IQGAP3Q86VI3 1631 aa9.55□□□□□ -0.88
RORA-201ENST00000261523 ADGRB3O60242 1522 aa9.55□□□□□ -0.88
RORA-201ENST00000261523 POTEDQ86YR6 584 aa9.55□□□□□ -0.88
RORA-201ENST00000261523 SLC52A1Q9NWF4 448 aa9.55□□□□□ -0.88
RORA-201ENST00000261523 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
RORA-201ENST00000261523 STAG3Q9UJ98 1225 aa9.54□□□□□ -0.88
RORA-201ENST00000261523 TMEM2Q9UHN6 1383 aa9.54□□□□□ -0.88
RORA-201ENST00000261523 FANCIQ9NVI1 1328 aa9.54□□□□□ -0.88
RORA-201ENST00000261523 PPP4R2Q9NY27 417 aa9.54□□□□□ -0.88
RORA-201ENST00000261523 ZBED9Q6R2W3 1325 aa9.53□□□□□ -0.88
RORA-201ENST00000261523 FAM9BQ8IZU0 186 aa9.53□□□□□ -0.88
RORA-201ENST00000261523 MRS2Q9HD23 443 aa9.53□□□□□ -0.88
RORA-201ENST00000261523 UBAP1LF5GYI3 381 aa9.52□□□□□ -0.89
RORA-201ENST00000261523 TXNDC2Q86VQ3 553 aa9.52□□□□□ -0.89
RORA-201ENST00000261523 SLC4A1APQ9BWU0 796 aaKnown RBP9.52□□□□□ -0.89
RORA-201ENST00000261523 E9PCH4 1651 aa9.51□□□□□ -0.89
RORA-201ENST00000261523 TOM1O60784 492 aa9.5□□□□□ -0.89
RORA-201ENST00000261523 IDI1Q13907 227 aa9.5□□□□□ -0.89
RORA-201ENST00000261523 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
RORA-201ENST00000261523 STRCP1A6NGW2 1772 aa9.49□□□□□ -0.89
RORA-201ENST00000261523 LTKP29376 864 aa9.49□□□□□ -0.89
RORA-201ENST00000261523 NUP155O75694 1391 aa9.49□□□□□ -0.89
RORA-201ENST00000261523 TMEM131LA2VDJ0 1609 aa9.49□□□□□ -0.89
RORA-201ENST00000261523 RNF216Q9NWF9 866 aaPredicted RBP9.48□□□□□ -0.89
RORA-201ENST00000261523 LRRC7Q96NW7 1537 aa9.48□□□□□ -0.89
RORA-201ENST00000261523 MYO5BQ9ULV0 1848 aa9.48□□□□□ -0.89
RORA-201ENST00000261523 SPHKAPQ2M3C7 1700 aa9.47□□□□□ -0.89
RORA-201ENST00000261523 ZFYVE9O95405 1425 aa9.47□□□□□ -0.89
RORA-201ENST00000261523 NKTRP30414 1462 aaKnown RBP9.46□□□□□ -0.89
RORA-201ENST00000261523 B4GALNT3Q6L9W6 998 aa9.46□□□□□ -0.89
RORA-201ENST00000261523 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.46□□□□□ -0.89
RORA-201ENST00000261523 SMG6Q86US8 1419 aaKnown RBP9.46□□□□□ -0.89
RORA-201ENST00000261523 DIP2AQ14689 1571 aa9.46□□□□□ -0.9
RORA-201ENST00000261523 NWD1Q149M9 1564 aa9.46□□□□□ -0.9
RORA-201ENST00000261523 USP47Q96K76 1375 aa9.46□□□□□ -0.9
RORA-201ENST00000261523 PLEKHG1Q9ULL1 1385 aa9.46□□□□□ -0.9
RORA-201ENST00000261523 HOXD11P31277 338 aaPredicted RBP9.46□□□□□ -0.9
RORA-201ENST00000261523 RIMS2Q9UQ26 1411 aa9.45□□□□□ -0.9
RORA-201ENST00000261523 XIRP1Q702N8 1843 aaKnown RBP9.44□□□□□ -0.9
RORA-201ENST00000261523 RNF123Q5XPI4 1314 aa9.44□□□□□ -0.9
RORA-201ENST00000261523 KCNA6P17658 529 aa9.43□□□□□ -0.9
RORA-201ENST00000261523 BCL11AQ9H165 835 aa9.43□□□□□ -0.9
RORA-201ENST00000261523 RALGAPBQ86X10 1494 aa9.43□□□□□ -0.9
RORA-201ENST00000261523 TRPM2O94759 1503 aa9.43□□□□□ -0.9
RORA-201ENST00000261523 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
RORA-201ENST00000261523 CHD2O14647 1828 aaKnown RBP9.43□□□□□ -0.9
RORA-201ENST00000261523 PIK3R4Q99570 1358 aa9.42□□□□□ -0.9
RORA-201ENST00000261523 NUDCQ9Y266 331 aa9.42□□□□□ -0.9
RORA-201ENST00000261523 DISP3Q9P2K9 1392 aa9.42□□□□□ -0.9
RORA-201ENST00000261523 KIF1BO60333 1816 aa9.41□□□□□ -0.9
RORA-201ENST00000261523 PIP4K2BP78356 416 aa9.41□□□□□ -0.9
RORA-201ENST00000261523 ZNF326Q5BKZ1 582 aaKnown RBP9.41□□□□□ -0.9
RORA-201ENST00000261523 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
RORA-201ENST00000261523 TBX22Q9Y458 520 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms