RNA–Protein interactions for RNA: ENSMUST00000110387.3

Ncaph-201, Transcript of Condensin complex subunit 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncaph, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncaph-201ENSMUST00000110387 Atp10dQ8K2X1 1416 aa17.55■□□□□ 0.4
Ncaph-201ENSMUST00000110387 NhsB1AV60 1647 aa17.55■□□□□ 0.4
Ncaph-201ENSMUST00000110387 Ttll13A4Q9F6 804 aa17.53■□□□□ 0.4
Ncaph-201ENSMUST00000110387 Rab3gap2Q8BMG7 1366 aa17.53■□□□□ 0.4
Ncaph-201ENSMUST00000110387 Sall3Q62255 1320 aa17.53■□□□□ 0.4
Ncaph-201ENSMUST00000110387 Atf7ipQ7TT18 1306 aa17.53■□□□□ 0.4
Ncaph-201ENSMUST00000110387 Gm20521D3Z5F7 333 aa17.51■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Rwdd1Q9CQK7 243 aa17.51■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Usp54Q8BL06 1588 aaKnown RBP17.51■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Ylpm1Q9R0I7 1386 aaKnown RBP17.49■□□□□ 0.39
Ncaph-201ENSMUST00000110387 ShprhQ7TPQ3 1674 aa17.49■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Abcc6Q9R1S7 1498 aa17.49■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Os9Q8K2C7 672 aa17.49■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Abca8bQ8K440 1620 aa17.49■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Abcc1O35379 1528 aa17.48■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Kif3bQ61771 747 aa17.47■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Pola1P33609 1465 aa17.47■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Kif1bQ60575 1816 aaKnown RBP17.47■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Gtf2e1Q9D0D5 440 aa17.47■□□□□ 0.39
Ncaph-201ENSMUST00000110387 AnkarA2RT91 1465 aa17.46■□□□□ 0.39
Ncaph-201ENSMUST00000110387 Clasp1Q80TV8 1535 aaKnown RBP17.45■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Igf1rQ60751 1373 aa17.45■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Plekhh1Q80TI1 1356 aa17.44■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Kif7B7ZNG0 1348 aa17.44■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Kdm2bQ6P1G2 1309 aa17.44■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Stard8Q8K031 1019 aa17.44■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Ttc21bQ0HA38 1315 aa17.44■□□□□ 0.38
Ncaph-201ENSMUST00000110387 ChgaP26339 463 aaKnown RBP17.44■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Speer4f1Q9D5Q6 258 aa17.44■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Uggt2E9Q4X2 1504 aa17.43■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Kidins220E9Q9B7 1793 aa17.43■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Usp40Q8BWR4 1235 aa17.43■□□□□ 0.38
Ncaph-201ENSMUST00000110387 B4galnt3Q6L8S8 986 aa17.42■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Stk24Q99KH8 431 aa17.42■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Srpk2O54781 681 aaKnown RBP17.42■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Dcaf11Q91VU6 549 aa17.42■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Nlrp6Q91WS2 869 aa17.42■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Ak9G3UYQ4 1894 aa17.41■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Iqcf3Q9D498 203 aa17.41■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Znf608Q56A10 1511 aa17.41■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Fan1Q69ZT1 1020 aa17.41■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Abca17E9PX95 1733 aa17.4■□□□□ 0.38
Ncaph-201ENSMUST00000110387 EspnQ9ET47 871 aa17.4■□□□□ 0.38
Ncaph-201ENSMUST00000110387 ErbinQ80TH2 1402 aa17.4■□□□□ 0.38
Ncaph-201ENSMUST00000110387 Ccdc30Q8BVF4 654 aa17.39■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Col17a1Q07563 1470 aa17.39■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Apbb1Q9QXJ1 710 aa17.39■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Neurod2Q62414 383 aa17.38■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Nos1Q9Z0J4 1429 aa17.37■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Lemd3Q9WU40 921 aa17.37■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Chd1P40201 1711 aa17.37■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Usp19Q3UJD6 1360 aa17.37■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Chmp5Q9D7S9 219 aa17.37■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Dbr1Q923B1 550 aa17.36■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Golga2Q921M4 999 aa17.36■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Hsp90aa1P07901 733 aaKnown RBP17.35■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Nkx1-2P42580 305 aa17.35■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Xrn1P97789 1719 aaKnown RBP17.35■□□□□ 0.37
Ncaph-201ENSMUST00000110387 AatkQ80YE4 1365 aa17.34■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Gprasp1Q5U4C1 1347 aa17.34■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Nphp4P59240 1425 aa17.34■□□□□ 0.37
Ncaph-201ENSMUST00000110387 Smc5Q8CG46 1101 aaKnown RBP17.33■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Zmym3Q9JLM4 1370 aa17.33■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Itsn2Q9Z0R6 1659 aa17.33■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Uspl1Q3ULM6 1089 aa17.33■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Ccdc9Q8VC31 543 aaKnown RBP17.33■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Ralbp1Q62172 648 aa17.32■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Kiaa1107Q80TK0 1369 aa17.31■□□□□ 0.36
Ncaph-201ENSMUST00000110387 CanxP35564 591 aaKnown RBP17.31■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Myo5cE9Q1F5 1742 aa17.3■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Myo3aQ8K3H5 1613 aa17.3■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Zfyve16Q80U44 1528 aa17.3■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Ythdc2B2RR83 1445 aaKnown RBP17.3■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Puf60Q3UEB3 564 aaKnown RBP17.3■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Znf518aB2RRF6 1478 aaKnown RBP17.3■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Cep152A2AUM9 1736 aaKnown RBP17.29■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Arid3cA6PWV5 409 aa17.29■□□□□ 0.36
Ncaph-201ENSMUST00000110387 NudcO35685 332 aaKnown RBP17.29■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Rims1Q99NE5 1463 aa17.29■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Mapk8ip3Q9ESN9 1337 aa17.29■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Kdm5aQ3UXZ9 1690 aa17.28■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Cnga1P29974 684 aa17.28■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Prdm10Q3UTQ7 1184 aa17.28■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Tmem131lQ3U3D7 1597 aa17.27■□□□□ 0.36
Ncaph-201ENSMUST00000110387 Iqgap3F8VQ29 1632 aa17.27■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Fndc1E9Q043 1732 aa17.27■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Tspyl2Q7TQI8 677 aa17.26■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Map4k4P97820 1233 aaKnown RBP17.26■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Abca6Q8K441 1624 aa17.26■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Gas2l2Q5SSG4 860 aa17.25■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Dnai1Q8C0M8 701 aa17.24■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Abca9Q8K449 1623 aa17.24■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Talpid3E9PV87 1520 aa17.23■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Ppm1gQ61074 542 aa17.23■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Abca8aQ8K442 1620 aa17.23■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Stag3O70576 1240 aa17.22■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Sart3Q9JLI8 962 aaKnown RBP17.22■□□□□ 0.35
Ncaph-201ENSMUST00000110387 GsdmaQ9EST1 446 aa17.21■□□□□ 0.35
Ncaph-201ENSMUST00000110387 Pank1Q8K4K6 548 aa17.21■□□□□ 0.35
Ncaph-201ENSMUST00000110387 KdrP35918 1367 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms