RNA–Protein interactions for RNA: ENSMUST00000110387.3

Ncaph-201, Transcript of Condensin complex subunit 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncaph, Length 2,695 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncaph-201ENSMUST00000110387 NischQ80TM9 1593 aa25.23■■□□□ 1.63
Ncaph-201ENSMUST00000110387 Gm35339A0A140LHH9 1649 aa24.6■■□□□ 1.53
Ncaph-201ENSMUST00000110387 Abcc9P70170 1546 aa24.49■■□□□ 1.51
Ncaph-201ENSMUST00000110387 Abcc8B2RUS7 1588 aa23.92■■□□□ 1.42
Ncaph-201ENSMUST00000110387 Rhox8Q6VSS7 320 aa23.69■■□□□ 1.38
Ncaph-201ENSMUST00000110387 Rtl1Q7M732 1744 aa23.31■■□□□ 1.32
Ncaph-201ENSMUST00000110387 Ccdc180J3QNE4 1664 aa23.01■■□□□ 1.27
Ncaph-201ENSMUST00000110387 Zcchc6Q5BLK4 1491 aaKnown RBP22.54■■□□□ 1.2
Ncaph-201ENSMUST00000110387 Dcaf1Q80TR8 1506 aa22.36■■□□□ 1.17
Ncaph-201ENSMUST00000110387 Rpgrip1Q9EPQ2 1331 aa22.23■■□□□ 1.15
Ncaph-201ENSMUST00000110387 ScribQ80U72 1612 aa22.12■■□□□ 1.13
Ncaph-201ENSMUST00000110387 Rb1cc1Q9ESK9 1588 aa22.09■■□□□ 1.13
Ncaph-201ENSMUST00000110387 HrcG5E8J6 738 aa22.08■■□□□ 1.13
Ncaph-201ENSMUST00000110387 Ccdc136Q3TVA9 1136 aa21.97■■□□□ 1.11
Ncaph-201ENSMUST00000110387 Baz1aO88379 1555 aa21.86■■□□□ 1.09
Ncaph-201ENSMUST00000110387 Acin1Q9JIX8 1338 aaKnown RBP21.82■■□□□ 1.08
Ncaph-201ENSMUST00000110387 Kdm5dQ62240 1548 aa21.8■■□□□ 1.08
Ncaph-201ENSMUST00000110387 NacadQ5SWP3 1504 aa21.63■■□□□ 1.05
Ncaph-201ENSMUST00000110387 Ehmt2Q9Z148 1263 aaKnown RBP21.62■■□□□ 1.05
Ncaph-201ENSMUST00000110387 Trim41Q5NCC3 630 aa21.57■■□□□ 1.04
Ncaph-201ENSMUST00000110387 Crybg2B7ZCC2 1516 aa21.48■■□□□ 1.03
Ncaph-201ENSMUST00000110387 Smarca2Q6DIC0 1577 aa21.38■■□□□ 1.01
Ncaph-201ENSMUST00000110387 Cep164Q5DU05 1446 aa21.27■■□□□ 1
Ncaph-201ENSMUST00000110387 Sycp2Q9CUU3 1500 aa21.16■□□□□ 0.98
Ncaph-201ENSMUST00000110387 Pcgf6Q99NA9 353 aa21.03■□□□□ 0.96
Ncaph-201ENSMUST00000110387 Chic1Q8CBW7 227 aa20.97■□□□□ 0.95
Ncaph-201ENSMUST00000110387 Brd4Q9ESU6 1400 aaKnown RBP20.96■□□□□ 0.95
Ncaph-201ENSMUST00000110387 Cngb1E1AZ71 1325 aa20.96■□□□□ 0.95
Ncaph-201ENSMUST00000110387 Rsf1E9PWW9 1441 aaKnown RBP20.94■□□□□ 0.94
Ncaph-201ENSMUST00000110387 Cecr2E9Q2Z1 1453 aa20.87■□□□□ 0.93
Ncaph-201ENSMUST00000110387 Gab3Q8BSM5 595 aa20.82■□□□□ 0.92
Ncaph-201ENSMUST00000110387 Golga3P55937 1487 aa20.79■□□□□ 0.92
Ncaph-201ENSMUST00000110387 Ccdc88bQ4QRL3 1481 aa20.77■□□□□ 0.91
Ncaph-201ENSMUST00000110387 Synj1Q8CHC4 1574 aa20.7■□□□□ 0.9
Ncaph-201ENSMUST00000110387 Supt5hO55201 1082 aaKnown RBP20.64■□□□□ 0.89
Ncaph-201ENSMUST00000110387 BicraF8VPZ9 1578 aa20.63■□□□□ 0.89
Ncaph-201ENSMUST00000110387 CftrP26361 1476 aa20.6■□□□□ 0.89
Ncaph-201ENSMUST00000110387 Esf1Q3V1V3 845 aaKnown RBP20.6■□□□□ 0.89
Ncaph-201ENSMUST00000110387 NefmP08553 848 aa20.5■□□□□ 0.87
Ncaph-201ENSMUST00000110387 Mier1Q5UAK0 511 aa20.49■□□□□ 0.87
Ncaph-201ENSMUST00000110387 Top2bQ64511 1612 aa20.45■□□□□ 0.86
Ncaph-201ENSMUST00000110387 Cttnbp2B9EJA2 1648 aa20.37■□□□□ 0.85
Ncaph-201ENSMUST00000110387 Zeb1Q64318 1117 aa20.36■□□□□ 0.85
Ncaph-201ENSMUST00000110387 Smarca4Q3TKT4 1613 aaKnown RBP20.26■□□□□ 0.83
Ncaph-201ENSMUST00000110387 Rapgef2Q8CHG7 1496 aa20.23■□□□□ 0.83
Ncaph-201ENSMUST00000110387 Cc2d2aQ8CFW7 1633 aa20.2■□□□□ 0.82
Ncaph-201ENSMUST00000110387 Fmn1Q05860 1466 aa20.19■□□□□ 0.82
Ncaph-201ENSMUST00000110387 Neurod1Q60867 357 aa20.15■□□□□ 0.82
Ncaph-201ENSMUST00000110387 UbtfP25976 765 aaKnown RBP20.14■□□□□ 0.82
Ncaph-201ENSMUST00000110387 Sall2Q9QX96 1004 aa20.12■□□□□ 0.81
Ncaph-201ENSMUST00000110387 Top2aQ01320 1528 aaKnown RBP20.11■□□□□ 0.81
Ncaph-201ENSMUST00000110387 Cep162Q6ZQ06 1403 aa20.08■□□□□ 0.81
Ncaph-201ENSMUST00000110387 Myt1lP97500 1187 aa20.03■□□□□ 0.8
Ncaph-201ENSMUST00000110387 Iqgap2Q3UQ44 1575 aa19.96■□□□□ 0.79
Ncaph-201ENSMUST00000110387 Npm2Q80W85 207 aa19.94■□□□□ 0.78
Ncaph-201ENSMUST00000110387 Las1lA2BE28 776 aaKnown RBP19.93■□□□□ 0.78
Ncaph-201ENSMUST00000110387 Aebp2Q9Z248 504 aaKnown RBP19.86■□□□□ 0.77
Ncaph-201ENSMUST00000110387 Atad2bE9Q166 1460 aaKnown RBP19.86■□□□□ 0.77
Ncaph-201ENSMUST00000110387 Clip1Q922J3 1391 aa19.85■□□□□ 0.77
Ncaph-201ENSMUST00000110387 Wdr66E9Q743 1299 aa19.82■□□□□ 0.76
Ncaph-201ENSMUST00000110387 Eif4g1Q6NZJ6 1600 aaKnown RBP19.78■□□□□ 0.76
Ncaph-201ENSMUST00000110387 Plekhg3Q4VAC9 1341 aa19.76■□□□□ 0.75
Ncaph-201ENSMUST00000110387 Anks4bQ8K3X6 423 aa19.75■□□□□ 0.75
Ncaph-201ENSMUST00000110387 ClspnQ80YR7 1315 aa19.74■□□□□ 0.75
Ncaph-201ENSMUST00000110387 TnnQ80Z71 1560 aa19.72■□□□□ 0.75
Ncaph-201ENSMUST00000110387 Pds5bQ4VA53 1446 aaKnown RBP19.72■□□□□ 0.75
Ncaph-201ENSMUST00000110387 TonslQ6NZL6 1363 aa19.71■□□□□ 0.75
Ncaph-201ENSMUST00000110387 Arhgap35Q91YM2 1499 aa19.66■□□□□ 0.74
Ncaph-201ENSMUST00000110387 Ncapd3Q6ZQK0 1506 aa19.66■□□□□ 0.74
Ncaph-201ENSMUST00000110387 PtprkP35822 1457 aa19.62■□□□□ 0.73
Ncaph-201ENSMUST00000110387 NrkQ9R0G8 1455 aa19.61■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Cdk11bP24788 784 aaKnown RBP19.59■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Eea1Q8BL66 1411 aa19.59■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Frmpd1A2AKB4 1549 aa19.59■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Nop58Q6DFW4 536 aaKnown RBP19.59■□□□□ 0.73
Ncaph-201ENSMUST00000110387 Ppargc1bQ8VHJ7 1014 aa19.55■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Il27Q8K3I6 234 aa19.54■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Arap1Q4LDD4 1452 aa19.53■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Lamc3Q9R0B6 1581 aa19.53■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Wdr62Q3U3T8 1523 aa19.53■□□□□ 0.72
Ncaph-201ENSMUST00000110387 Kif15Q6P9L6 1387 aa19.5■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Setd5Q5XJV7 1441 aa19.49■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Shroom4Q1W617 1475 aa19.48■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Ap3b1Q9Z1T1 1105 aa19.47■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Csrnp3P59055 597 aa19.47■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Arhgef5E9Q7D5 1581 aa19.46■□□□□ 0.71
Ncaph-201ENSMUST00000110387 Ccdc18Q640L5 1455 aa19.46■□□□□ 0.7
Ncaph-201ENSMUST00000110387 Map3k1P53349 1493 aa19.44■□□□□ 0.7
Ncaph-201ENSMUST00000110387 1700123L14RikQ3V2K7 440 aa19.41■□□□□ 0.7
Ncaph-201ENSMUST00000110387 Camsap1A2AHC3 1581 aa19.39■□□□□ 0.69
Ncaph-201ENSMUST00000110387 Kdm5bQ80Y84 1544 aa19.38■□□□□ 0.69
Ncaph-201ENSMUST00000110387 Eid3Q3V124 375 aa19.35■□□□□ 0.69
Ncaph-201ENSMUST00000110387 Ercc6F8VPZ5 1481 aa19.34■□□□□ 0.69
Ncaph-201ENSMUST00000110387 Grin2bQ01097 1482 aa19.33■□□□□ 0.68
Ncaph-201ENSMUST00000110387 Mroh2bQ7M6Y6 1581 aa19.33■□□□□ 0.68
Ncaph-201ENSMUST00000110387 Tiam1Q60610 1591 aa19.31■□□□□ 0.68
Ncaph-201ENSMUST00000110387 Naip1Q9QWK5 1403 aa19.3■□□□□ 0.68
Ncaph-201ENSMUST00000110387 BlmO88700 1416 aa19.29■□□□□ 0.68
Ncaph-201ENSMUST00000110387 Baz1bQ9Z277 1479 aa19.25■□□□□ 0.67
Ncaph-201ENSMUST00000110387 AqrQ8CFQ3 1481 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 329.8 ms