RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Egfem1Q8C088 590 aa19.99■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Esx1O88933 382 aa19.97■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Gm16486A0A1D5RMD1 1434 aa19.97■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Fam184bQ0KK56 942 aa19.97■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Uggt2E9Q4X2 1504 aa19.96■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 NeflP08551 543 aa19.96■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Ppp2r1aQ76MZ3 589 aa19.96■□□□□ 0.79
Nkx3-1-201ENSMUST00000022646 Arid4bA2CG63 1314 aaKnown RBP19.95■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Pola1P33609 1465 aa19.95■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Myo5cE9Q1F5 1742 aa19.95■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Gm20521D3Z5F7 333 aa19.95■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Ythdc2B2RR83 1445 aaKnown RBP19.95■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Mink1Q9JM52 1308 aa19.94■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Zfyve16Q80U44 1528 aa19.93■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Stk24Q99KH8 431 aa19.93■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Ttc21bQ0HA38 1315 aa19.92■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Arid3cA6PWV5 409 aa19.92■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 AnkarA2RT91 1465 aa19.92■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Nos1Q9Z0J4 1429 aa19.92■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Rab3gap2Q8BMG7 1366 aa19.91■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Lemd3Q9WU40 921 aa19.91■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 CrbnQ8C7D2 445 aa19.91■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 ErbinQ80TH2 1402 aa19.9■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Prkrip1Q9CWV6 186 aaKnown RBP19.9■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Abca9Q8K449 1623 aa19.9■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Kif16bB1AVY7 1312 aa19.9■□□□□ 0.78
Nkx3-1-201ENSMUST00000022646 Gtf2e1Q9D0D5 440 aa19.88■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Abca6Q8K441 1624 aa19.87■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Itsn2Q9Z0R6 1659 aa19.87■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Fndc1E9Q043 1732 aa19.87■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Srpk2O54781 681 aaKnown RBP19.87■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Fan1Q69ZT1 1020 aa19.87■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Usp40Q8BWR4 1235 aa19.85■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Znf518aB2RRF6 1478 aaKnown RBP19.85■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 PtprtQ99M80 1454 aa19.85■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Ak9G3UYQ4 1894 aa19.84■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Iqgap3F8VQ29 1632 aa19.84■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Kif7B7ZNG0 1348 aa19.84■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Tmem131lQ3U3D7 1597 aa19.84■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Cep152A2AUM9 1736 aaKnown RBP19.84■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Atf7ipQ7TT18 1306 aa19.84■□□□□ 0.77
Nkx3-1-201ENSMUST00000022646 Myo3aQ8K3H5 1613 aa19.82■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 TnikP83510 1323 aa19.82■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Clasp1Q80TV8 1535 aaKnown RBP19.81■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Col17a1Q07563 1470 aa19.81■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Stard8Q8K031 1019 aa19.81■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Dcaf11Q91VU6 549 aa19.81■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Ipo9Q91YE6 1041 aa19.81■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 AatkQ80YE4 1365 aa19.8■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Nlrp6Q91WS2 869 aa19.8■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Ttc41Q692V3 1318 aa19.8■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Abca8aQ8K442 1620 aa19.79■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Kdm5aQ3UXZ9 1690 aa19.79■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Rims1Q99NE5 1463 aa19.78■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Nphp4P59240 1425 aa19.78■□□□□ 0.76
Nkx3-1-201ENSMUST00000022646 Prex1Q69ZK0 1650 aa19.76■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Speer4f1Q9D5Q6 258 aa19.76■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Prdm10Q3UTQ7 1184 aa19.76■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Rwdd1Q9CQK7 243 aa19.76■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Mbd3Q9Z2D8 285 aaKnown RBP19.75■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Plekhh1Q80TI1 1356 aa19.75■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Cdk5rap2Q8K389 1822 aa19.75■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Adgrb3Q80ZF8 1522 aa19.74■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Puf60Q3UEB3 564 aaKnown RBP19.73■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Cnga1P29974 684 aa19.73■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Neurod2Q62414 383 aa19.73■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Topbp1Q6ZQF0 1515 aa19.72■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Usp19Q3UJD6 1360 aa19.72■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 OvosQ3UU35 1456 aa19.72■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Apbb1Q9QXJ1 710 aa19.71■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Ttll13A4Q9F6 804 aa19.71■□□□□ 0.75
Nkx3-1-201ENSMUST00000022646 Ccdc30Q8BVF4 654 aa19.7■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Ehbp1l1Q99MS7 1716 aa19.7■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Myom2Q14BI5 1463 aa19.68■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Gli2Q0VGT2 1544 aa19.68■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Golga2Q921M4 999 aa19.68■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Trpm1Q2TV84 1622 aa19.68■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Talpid3E9PV87 1520 aa19.67■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 DnmbpQ6TXD4 1580 aa19.67■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 B4galnt3Q6L8S8 986 aa19.67■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Efcab6Q6P1E8 1516 aa19.66■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Myom1Q62234 1667 aaKnown RBP19.66■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Depdc5P61460 1591 aa19.66■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Kiaa1107Q80TK0 1369 aa19.66■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Gprasp1Q5U4C1 1347 aa19.66■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Kdm2bQ6P1G2 1309 aa19.66■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Ptch1Q61115 1434 aa19.65■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Uggt1Q6P5E4 1551 aa19.65■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Stag3O70576 1240 aa19.65■□□□□ 0.74
Nkx3-1-201ENSMUST00000022646 Ccdc27Q3V036 639 aa19.63■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 Bcl11aQ9QYE3 773 aa19.63■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 Sipa1l1Q8C0T5 1782 aa19.63■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 AU022751B1B0V2 589 aa19.62■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 Atp10aO54827 1508 aa19.62■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 ChgaP26339 463 aaKnown RBP19.6■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 Uspl1Q3ULM6 1089 aa19.6■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 Dbr1Q923B1 550 aa19.6■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 Prdm2A2A7B5 1709 aaKnown RBP19.6■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 Tecpr2Q3UH45 1423 aa19.59■□□□□ 0.73
Nkx3-1-201ENSMUST00000022646 Ralbp1Q62172 648 aa19.58■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms