RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 AnkarA2RT91 1465 aa24.87■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Rad21Q61550 635 aaKnown RBP24.86■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Ttc41Q692V3 1318 aa24.85■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Myo5cE9Q1F5 1742 aa24.85■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 NeflP08551 543 aa24.85■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Itsn2Q9Z0R6 1659 aa24.84■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Srcin1Q9QWI6 1250 aa24.82■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Slc4a1apE9PX68 744 aa24.8■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Ppp2r1aQ76MZ3 589 aa24.8■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Rab3gap2Q8BMG7 1366 aa24.79■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Ylpm1Q9R0I7 1386 aaKnown RBP24.79■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Esx1O88933 382 aa24.78■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 DiexfQ8BTT6 772 aaKnown RBP24.78■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Kif16bB1AVY7 1312 aa24.78■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Znf608Q56A10 1511 aa24.77■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Atf7ipQ7TT18 1306 aa24.77■■□□□ 1.56
Shkbp1-201ENSMUST00000003857 Fam184bQ0KK56 942 aa24.76■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Cep152A2AUM9 1736 aaKnown RBP24.76■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Zfyve16Q80U44 1528 aa24.74■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Erich6D3Z6S9 713 aa24.73■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Sall3Q62255 1320 aa24.73■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Fndc1E9Q043 1732 aa24.73■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Kdm2aP59997 1161 aa24.72■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Mbd3Q9Z2D8 285 aaKnown RBP24.72■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Tmem131lQ3U3D7 1597 aa24.72■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Ccdc27Q3V036 639 aa24.72■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Kdm5aQ3UXZ9 1690 aa24.71■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Col17a1Q07563 1470 aa24.71■■□□□ 1.55
Shkbp1-201ENSMUST00000003857 Ifnlr1Q8CGK5 535 aa24.7■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 CrbnQ8C7D2 445 aa24.69■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 Nos1Q9Z0J4 1429 aa24.68■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 Iqgap3F8VQ29 1632 aa24.68■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 Abca6Q8K441 1624 aa24.66■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 Igf1rQ60751 1373 aa24.66■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 Plekhh1Q80TI1 1356 aa24.66■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 Abca8aQ8K442 1620 aa24.65■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 Abca9Q8K449 1623 aa24.65■■□□□ 1.54
Shkbp1-201ENSMUST00000003857 Cdk5rap2Q8K389 1822 aa24.63■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Ttll13A4Q9F6 804 aa24.63■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Kif3bQ61771 747 aa24.62■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 ErbinQ80TH2 1402 aa24.62■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Myo3aQ8K3H5 1613 aa24.62■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Rims1Q99NE5 1463 aa24.61■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Ttc21bQ0HA38 1315 aa24.61■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Kdm2bQ6P1G2 1309 aa24.61■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Gm20521D3Z5F7 333 aa24.61■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Znf518aB2RRF6 1478 aaKnown RBP24.6■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Kif7B7ZNG0 1348 aa24.6■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Rwdd1Q9CQK7 243 aa24.59■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Usp19Q3UJD6 1360 aa24.59■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Nphp4P59240 1425 aa24.59■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Myom1Q62234 1667 aaKnown RBP24.59■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Stard8Q8K031 1019 aa24.58■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Os9Q8K2C7 672 aa24.58■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Gtf2e1Q9D0D5 440 aa24.58■■□□□ 1.53
Shkbp1-201ENSMUST00000003857 Trpm1Q2TV84 1622 aa24.57■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 DnmbpQ6TXD4 1580 aa24.55■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Ehbp1l1Q99MS7 1716 aa24.55■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Zmym3Q9JLM4 1370 aa24.55■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Sipa1l1Q8C0T5 1782 aa24.55■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Prex1Q69ZK0 1650 aa24.55■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Usp40Q8BWR4 1235 aa24.54■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Adgrb3Q80ZF8 1522 aa24.53■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Talpid3E9PV87 1520 aa24.53■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Speer4f1Q9D5Q6 258 aa24.52■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Topbp1Q6ZQF0 1515 aa24.52■■□□□ 1.52
Shkbp1-201ENSMUST00000003857 Srpk2O54781 681 aaKnown RBP24.51■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 AatkQ80YE4 1365 aa24.51■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Prdm2A2A7B5 1709 aaKnown RBP24.51■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Stk24Q99KH8 431 aa24.51■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Myom2Q14BI5 1463 aa24.5■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Ythdc2B2RR83 1445 aaKnown RBP24.5■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 ChgaP26339 463 aaKnown RBP24.5■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Fan1Q69ZT1 1020 aa24.5■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Ccdc30Q8BVF4 654 aa24.5■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Dcaf11Q91VU6 549 aa24.5■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Nlrp6Q91WS2 869 aa24.5■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Gprasp1Q5U4C1 1347 aa24.49■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Lemd3Q9WU40 921 aa24.49■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Iqcf3Q9D498 203 aa24.48■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Uggt1Q6P5E4 1551 aa24.48■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 B4galnt3Q6L8S8 986 aa24.47■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Kiaa1107Q80TK0 1369 aa24.46■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 EspnQ9ET47 871 aa24.45■■□□□ 1.51
Shkbp1-201ENSMUST00000003857 Efcab6Q6P1E8 1516 aa24.45■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Depdc5P61460 1591 aa24.43■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 PtprtQ99M80 1454 aa24.42■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Nkx1-2P42580 305 aa24.42■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Golga2Q921M4 999 aa24.42■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Neurod2Q62414 383 aa24.42■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Apbb1Q9QXJ1 710 aa24.42■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Smc5Q8CG46 1101 aaKnown RBP24.4■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Uspl1Q3ULM6 1089 aa24.4■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Akap12Q9WTQ5 1684 aa24.39■■□□□ 1.5
Shkbp1-201ENSMUST00000003857 Chmp5Q9D7S9 219 aa24.39■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Ralbp1Q62172 648 aa24.38■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 KdrP35918 1367 aa24.38■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Puf60Q3UEB3 564 aaKnown RBP24.38■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Tecpr2Q3UH45 1423 aa24.38■■□□□ 1.49
Shkbp1-201ENSMUST00000003857 Dbr1Q923B1 550 aa24.37■■□□□ 1.49
Retrieved 100 of 22,080 RNA–protein pairs in 9 ms