RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C FMP42Q04991 504 aa5.32□□□□□ -1.56
SHO1YER118C YLR281CQ05863 155 aa5.32□□□□□ -1.56
SHO1YER118C DGA1Q08650 418 aa5.32□□□□□ -1.56
SHO1YER118C RPO31P04051 1460 aa5.32□□□□□ -1.56
SHO1YER118C MBF1O14467 151 aaKnown RBP5.31□□□□□ -1.56
SHO1YER118C RPS8AP0CX39 200 aaKnown RBP5.31□□□□□ -1.56
SHO1YER118C RPS8BP0CX40 200 aaKnown RBP5.31□□□□□ -1.56
SHO1YER118C CNB1P25296 175 aa5.31□□□□□ -1.56
SHO1YER118C PEX34P25584 144 aa5.31□□□□□ -1.56
SHO1YER118C SMP1P38128 452 aa5.31□□□□□ -1.56
SHO1YER118C YBR285WP38354 144 aa5.31□□□□□ -1.56
SHO1YER118C AVT1P47082 602 aa5.31□□□□□ -1.56
SHO1YER118C YJR015WP47090 510 aa5.31□□□□□ -1.56
SHO1YER118C FMP48P53233 369 aa5.31□□□□□ -1.56
SHO1YER118C TRM12Q04235 462 aa5.31□□□□□ -1.56
SHO1YER118C SCC2Q04002 1493 aa5.31□□□□□ -1.56
SHO1YER118C RPS1AP33442 255 aaKnown RBP5.3□□□□□ -1.56
SHO1YER118C YGL101WP53144 215 aa5.3□□□□□ -1.56
SHO1YER118C FRQ1Q06389 190 aa5.3□□□□□ -1.56
SHO1YER118C YPR011CQ12251 326 aa5.3□□□□□ -1.56
SHO1YER118C STU1P38198 1513 aa5.29□□□□□ -1.56
SHO1YER118C UBI4P0CG63 381 aaKnown RBP5.29□□□□□ -1.56
SHO1YER118C RPL2AP0CX45 254 aaKnown RBP5.29□□□□□ -1.56
SHO1YER118C RPL2BP0CX46 254 aaKnown RBP5.29□□□□□ -1.56
SHO1YER118C SDH3P33421 198 aa5.29□□□□□ -1.56
SHO1YER118C MDM34P53083 459 aa5.29□□□□□ -1.56
SHO1YER118C ARO8P53090 500 aaKnown RBP5.29□□□□□ -1.56
SHO1YER118C YMR320WQ04897 101 aa5.29□□□□□ -1.56
SHO1YER118C MPD1Q12404 318 aaKnown RBP5.29□□□□□ -1.56
SHO1YER118C IZH2Q12442 317 aa5.29□□□□□ -1.56
SHO1YER118C RPL21BQ12672 160 aaKnown RBP5.29□□□□□ -1.56
SHO1YER118C OCH1P31755 480 aa5.28□□□□□ -1.56
SHO1YER118C FMP23P38231 175 aa5.28□□□□□ -1.56
SHO1YER118C YEA4P40004 342 aa5.28□□□□□ -1.56
SHO1YER118C AVT6P40074 448 aa5.28□□□□□ -1.56
SHO1YER118C MNN5P46982 586 aa5.28□□□□□ -1.56
SHO1YER118C YGL262WP53054 175 aa5.28□□□□□ -1.56
SHO1YER118C PGA1P53896 198 aa5.28□□□□□ -1.56
SHO1YER118C TIM8P57744 87 aa5.28□□□□□ -1.56
SHO1YER118C PAL1Q05518 499 aaKnown RBP5.28□□□□□ -1.56
SHO1YER118C YPS3Q12303 508 aa5.28□□□□□ -1.56
SHO1YER118C BNR1P40450 1375 aa5.28□□□□□ -1.56
SHO1YER118C TOP2P06786 1428 aaKnown RBP5.27□□□□□ -1.57
SHO1YER118C SCL1P21243 252 aaKnown RBP5.27□□□□□ -1.57
SHO1YER118C HSP30P25619 332 aa5.27□□□□□ -1.57
SHO1YER118C YGP1P38616 354 aaKnown RBP5.27□□□□□ -1.57
SHO1YER118C YND1P40009 630 aa5.27□□□□□ -1.57
SHO1YER118C YER189WP40104 122 aa5.27□□□□□ -1.57
SHO1YER118C APQ12P40532 138 aa5.27□□□□□ -1.57
SHO1YER118C ALB1P47019 175 aaPredicted RBP5.27□□□□□ -1.57
SHO1YER118C ARP3P47117 449 aaKnown RBP5.27□□□□□ -1.57
SHO1YER118C NEJ1Q06148 342 aa5.27□□□□□ -1.57
SHO1YER118C YLR179CQ06252 201 aaKnown RBP5.27□□□□□ -1.57
SHO1YER118C PRR2Q12310 699 aa5.27□□□□□ -1.57
SHO1YER118C MMS22Q06164 1454 aa5.26□□□□□ -1.57
SHO1YER118C PDR18P53756 1333 aa5.26□□□□□ -1.57
SHO1YER118C SPO13P23624 291 aa5.26□□□□□ -1.57
SHO1YER118C SDT1P53078 280 aa5.26□□□□□ -1.57
SHO1YER118C SWT21P53873 357 aaPredicted RBP5.26□□□□□ -1.57
SHO1YER118C LSM3P57743 89 aaKnown RBP5.26□□□□□ -1.57
SHO1YER118C HHT1P61830 136 aa5.26□□□□□ -1.57
SHO1YER118C YMD8Q03697 442 aa5.26□□□□□ -1.57
SHO1YER118C EMI1Q04406 187 aa5.26□□□□□ -1.57
SHO1YER118C HRD1Q08109 551 aa5.26□□□□□ -1.57
SHO1YER118C NDD1Q08887 554 aa5.26□□□□□ -1.57
SHO1YER118C TIM22Q12328 207 aa5.26□□□□□ -1.57
SHO1YER118C TDA8Q6B2U8 126 aa5.26□□□□□ -1.57
SHO1YER118C HTL1Q9URQ5 78 aa5.26□□□□□ -1.57
SHO1YER118C UFD4P33202 1483 aa5.26□□□□□ -1.57
SHO1YER118C SMC4Q12267 1418 aa5.25□□□□□ -1.57
SHO1YER118C YCF1P39109 1515 aaKnown RBP5.25□□□□□ -1.57
SHO1YER118C MED6P38782 295 aa5.25□□□□□ -1.57
SHO1YER118C MEP2P41948 499 aa5.25□□□□□ -1.57
SHO1YER118C TSA2Q04120 196 aa5.25□□□□□ -1.57
SHO1YER118C IES4Q08561 116 aa5.25□□□□□ -1.57
SHO1YER118C SLO1Q3E784 85 aa5.25□□□□□ -1.57
SHO1YER118C YPR014CQ6B0W2 109 aa5.25□□□□□ -1.57
SHO1YER118C PET9P18239 318 aaKnown RBP5.24□□□□□ -1.57
SHO1YER118C GGC1P38988 300 aa5.24□□□□□ -1.57
SHO1YER118C TIM17P39515 158 aa5.24□□□□□ -1.57
SHO1YER118C AST2P39945 430 aaKnown RBP5.24□□□□□ -1.57
SHO1YER118C IRC22P40006 225 aa5.24□□□□□ -1.57
SHO1YER118C GLC8P41818 229 aa5.24□□□□□ -1.57
SHO1YER118C RPE1P46969 238 aa5.24□□□□□ -1.57
SHO1YER118C YJL028WP47062 111 aa5.24□□□□□ -1.57
SHO1YER118C SOL1P50278 321 aa5.24□□□□□ -1.57
SHO1YER118C RPL21AQ02753 160 aaKnown RBP5.24□□□□□ -1.57
SHO1YER118C INP1Q03694 420 aa5.24□□□□□ -1.57
SHO1YER118C FMN1Q03778 218 aa5.24□□□□□ -1.57
SHO1YER118C SDH7Q04401 133 aa5.24□□□□□ -1.57
SHO1YER118C GRH1Q04410 372 aaKnown RBP5.24□□□□□ -1.57
SHO1YER118C YDR115WQ04598 105 aa5.24□□□□□ -1.57
SHO1YER118C YDR278CQ05612 105 aa5.24□□□□□ -1.57
SHO1YER118C TSC3Q3E790 80 aa5.24□□□□□ -1.57
SHO1YER118C RKR1Q04781 1562 aa5.24□□□□□ -1.57
SHO1YER118C UTP11P34247 250 aaPredicted RBP5.23□□□□□ -1.57
SHO1YER118C BAT1P38891 393 aaKnown RBP5.23□□□□□ -1.57
SHO1YER118C HPM1P40481 377 aa5.23□□□□□ -1.57
SHO1YER118C GAS3Q03655 524 aa5.23□□□□□ -1.57
SHO1YER118C LPP1Q04396 274 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms