RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A SNZ1Q03148 297 aa-0.34□□□□□ -2.46
SDH6YDR379C-A YML108WQ03759 105 aa-0.34□□□□□ -2.46
SDH6YDR379C-A BNA7Q04066 261 aa-0.34□□□□□ -2.46
SDH6YDR379C-A SEI1Q06058 285 aa-0.34□□□□□ -2.46
SDH6YDR379C-A FMP16Q12497 93 aa-0.34□□□□□ -2.46
SDH6YDR379C-A HFA1P32874 2273 aa-0.34□□□□□ -2.46
SDH6YDR379C-A TIM9O74700 87 aa-0.35□□□□□ -2.47
SDH6YDR379C-A CDC10P25342 322 aaKnown RBP-0.35□□□□□ -2.47
SDH6YDR379C-A AHT1P29589 182 aa-0.35□□□□□ -2.47
SDH6YDR379C-A RPB7P34087 171 aa-0.35□□□□□ -2.47
SDH6YDR379C-A YKL075CP36083 450 aa-0.35□□□□□ -2.47
SDH6YDR379C-A MRPL28P36527 147 aa-0.35□□□□□ -2.47
SDH6YDR379C-A RIB1P38066 345 aa-0.35□□□□□ -2.47
SDH6YDR379C-A YBR242WP38331 238 aa-0.35□□□□□ -2.47
SDH6YDR379C-A POP4P38336 279 aa-0.35□□□□□ -2.47
SDH6YDR379C-A DOG2P38773 246 aa-0.35□□□□□ -2.47
SDH6YDR379C-A YHR127WP38833 243 aaKnown RBP-0.35□□□□□ -2.47
SDH6YDR379C-A YMR144WP40214 342 aaKnown RBP-0.35□□□□□ -2.47
SDH6YDR379C-A OSW5P40219 148 aa-0.35□□□□□ -2.47
SDH6YDR379C-A GCN20P43535 752 aaKnown RBP-0.35□□□□□ -2.47
SDH6YDR379C-A USE1P53146 245 aa-0.35□□□□□ -2.47
SDH6YDR379C-A RHO3Q00245 231 aaKnown RBP-0.35□□□□□ -2.47
SDH6YDR379C-A YMD8Q03697 442 aa-0.35□□□□□ -2.47
SDH6YDR379C-A LPP1Q04396 274 aa-0.35□□□□□ -2.47
SDH6YDR379C-A YPR174CQ06616 221 aaPredicted RBP-0.35□□□□□ -2.47
SDH6YDR379C-A ODC2Q99297 307 aa-0.35□□□□□ -2.47
SDH6YDR379C-A SSK22P25390 1331 aaPredicted RBP-0.36□□□□□ -2.47
SDH6YDR379C-A SPT7P35177 1332 aa-0.36□□□□□ -2.47
SDH6YDR379C-A DAL82P21705 255 aa-0.36□□□□□ -2.47
SDH6YDR379C-A ATG22P25568 528 aa-0.36□□□□□ -2.47
SDH6YDR379C-A KRR1P25586 316 aaPredicted RBP-0.36□□□□□ -2.47
SDH6YDR379C-A ECM4P36156 370 aa-0.36□□□□□ -2.47
SDH6YDR379C-A BFR1P38934 470 aaKnown RBP RIP-Chip data-0.36□□□□□ -2.47not detected
SDH6YDR379C-A YPL073CP40323 161 aa-0.36□□□□□ -2.47
SDH6YDR379C-A YFL051CP43552 160 aa-0.36□□□□□ -2.47
SDH6YDR379C-A DCV1P43595 202 aa-0.36□□□□□ -2.47
SDH6YDR379C-A MGA1P53050 456 aa-0.36□□□□□ -2.47
SDH6YDR379C-A DAD4P69851 72 aa-0.36□□□□□ -2.47
SDH6YDR379C-A YDR209CQ03480 137 aa-0.36□□□□□ -2.47
SDH6YDR379C-A YMR226CQ05016 267 aaKnown RBP-0.36□□□□□ -2.47
SDH6YDR379C-A YLR413WQ06689 675 aa-0.36□□□□□ -2.47
SDH6YDR379C-A SNU23Q12368 194 aaPredicted RBP-0.36□□□□□ -2.47
SDH6YDR379C-A LSO2Q3E772 92 aaKnown RBP-0.36□□□□□ -2.47
SDH6YDR379C-A COX2P00410 251 aa-0.37□□□□□ -2.47
SDH6YDR379C-A MSF1P08425 469 aa-0.37□□□□□ -2.47
SDH6YDR379C-A MRP1P10662 321 aaKnown RBP-0.37□□□□□ -2.47
SDH6YDR379C-A SEN2P16658 377 aa-0.37□□□□□ -2.47
SDH6YDR379C-A DAL80P26343 269 aa-0.37□□□□□ -2.47
SDH6YDR379C-A YAR1P46683 200 aa-0.37□□□□□ -2.47
SDH6YDR379C-A UPS3Q04006 179 aa-0.37□□□□□ -2.47
SDH6YDR379C-A ADH6Q04894 360 aaKnown RBP-0.37□□□□□ -2.47
SDH6YDR379C-A FYV12Q08559 129 aa-0.37□□□□□ -2.47
SDH6YDR379C-A CSM4Q08955 156 aa-0.37□□□□□ -2.47
SDH6YDR379C-A PGC1Q08959 321 aa-0.37□□□□□ -2.47
SDH6YDR379C-A YHR213W-BQ8TGK1 99 aa-0.37□□□□□ -2.47
SDH6YDR379C-A TRX1P22217 103 aaKnown RBP-0.38□□□□□ -2.47
SDH6YDR379C-A SRB4P32569 687 aa-0.38□□□□□ -2.47
SDH6YDR379C-A YHL018WP38744 120 aaPredicted RBP-0.38□□□□□ -2.47
SDH6YDR379C-A UBC12P52491 188 aa-0.38□□□□□ -2.47
SDH6YDR379C-A MET31Q03081 177 aa-0.38□□□□□ -2.47
SDH6YDR379C-A TMA23Q03525 211 aa-0.38□□□□□ -2.47
SDH6YDR379C-A YDR286CQ05530 114 aa-0.38□□□□□ -2.47
SDH6YDR379C-A BTS1Q12051 335 aa-0.38□□□□□ -2.47
SDH6YDR379C-A MCP1Q12106 302 aa-0.38□□□□□ -2.47
SDH6YDR379C-A MDY2Q12285 212 aa-0.38□□□□□ -2.47
SDH6YDR379C-A SEC17P32602 292 aa-0.39□□□□□ -2.47
SDH6YDR379C-A SKG1P36169 355 aa-0.39□□□□□ -2.47
SDH6YDR379C-A HHY1P39982 102 aa-0.39□□□□□ -2.47
SDH6YDR379C-A YJR015WP47090 510 aa-0.39□□□□□ -2.47
SDH6YDR379C-A YJR149WP47177 404 aa-0.39□□□□□ -2.47
SDH6YDR379C-A NUP84P52891 726 aa-0.39□□□□□ -2.47
SDH6YDR379C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.39□□□□□ -2.47not detected
SDH6YDR379C-A FIT1Q04433 528 aa-0.39□□□□□ -2.47
SDH6YDR379C-A ABP140Q08641 628 aaKnown RBP-0.39□□□□□ -2.47
SDH6YDR379C-A REX3Q12090 404 aa-0.39□□□□□ -2.47
SDH6YDR379C-A YLR126CQ12288 251 aa-0.39□□□□□ -2.47
SDH6YDR379C-A YLR307C-AQ3E825 87 aa-0.39□□□□□ -2.47
SDH6YDR379C-A TAO3P40468 2376 aa-0.4□□□□□ -2.47
SDH6YDR379C-A YOL013W-AP0C272 63 aaPredicted RBP-0.4□□□□□ -2.47
SDH6YDR379C-A RPL27AP0C2H6 136 aaKnown RBP-0.4□□□□□ -2.47
SDH6YDR379C-A TPM1P17536 199 aaKnown RBP-0.4□□□□□ -2.47
SDH6YDR379C-A SPO13P23624 291 aa-0.4□□□□□ -2.47
SDH6YDR379C-A PTC1P35182 281 aa-0.4□□□□□ -2.47
SDH6YDR379C-A ALB1P47019 175 aaPredicted RBP-0.4□□□□□ -2.47
SDH6YDR379C-A AIM25P47140 327 aa-0.4□□□□□ -2.47
SDH6YDR379C-A MCM22P47167 239 aa-0.4□□□□□ -2.47
SDH6YDR379C-A PRM8P53174 237 aa-0.4□□□□□ -2.47
SDH6YDR379C-A YDR274CP87283 123 aa-0.4□□□□□ -2.47
SDH6YDR379C-A ELP6Q04868 273 aa-0.4□□□□□ -2.47
SDH6YDR379C-A YLR173WQ06247 608 aa-0.4□□□□□ -2.47
SDH6YDR379C-A PRP11Q07350 266 aaPredicted RBP-0.4□□□□□ -2.47
SDH6YDR379C-A DGA1Q08650 418 aa-0.4□□□□□ -2.47
SDH6YDR379C-A FIT2Q08906 153 aa-0.4□□□□□ -2.47
SDH6YDR379C-A YIL002W-AQ3E7Z5 69 aa-0.4□□□□□ -2.47
SDH6YDR379C-A COX8P04039 78 aa-0.41□□□□□ -2.48
SDH6YDR379C-A RPL24AP04449 155 aaKnown RBP-0.41□□□□□ -2.48
SDH6YDR379C-A RPL43AP0CX25 92 aaKnown RBP-0.41□□□□□ -2.48
SDH6YDR379C-A RPL43BP0CX26 92 aa-0.41□□□□□ -2.48
SDH6YDR379C-A URA5P13298 226 aaKnown RBP-0.41□□□□□ -2.48
SDH6YDR379C-A MGM101P32787 269 aaKnown RBP-0.41□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 442.6 ms