RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W SSH1P38353 490 aaKnown RBP3.51□□□□□ -1.85
PRE2YPR103W COG3P40094 801 aa3.51□□□□□ -1.85
PRE2YPR103W TIM11P81449 96 aaPredicted RBP3.51□□□□□ -1.85
PRE2YPR103W YLR126CQ12288 251 aa3.51□□□□□ -1.85
PRE2YPR103W SRB4P32569 687 aa3.5□□□□□ -1.85
PRE2YPR103W RCN1P36054 211 aa3.5□□□□□ -1.85
PRE2YPR103W YJL016WP47072 561 aa3.5□□□□□ -1.85
PRE2YPR103W RNH1Q04740 348 aa3.5□□□□□ -1.85
PRE2YPR103W SPO77Q06134 477 aa3.5□□□□□ -1.85
PRE2YPR103W MSA1Q08471 629 aa3.5□□□□□ -1.85
PRE2YPR103W VPS68Q12016 184 aa3.5□□□□□ -1.85
PRE2YPR103W YRF1-2P40105 1681 aa3.49□□□□□ -1.85
PRE2YPR103W ERD2P18414 219 aa3.49□□□□□ -1.85
PRE2YPR103W MRPL25P23369 157 aa3.49□□□□□ -1.85
PRE2YPR103W MSA2P36157 363 aa3.49□□□□□ -1.85
PRE2YPR103W TIF34P40217 347 aaKnown RBP3.49□□□□□ -1.85
PRE2YPR103W OST2P46964 130 aa3.49□□□□□ -1.85
PRE2YPR103W RPC17P47076 161 aa3.49□□□□□ -1.85
PRE2YPR103W IGO1P53897 168 aa3.49□□□□□ -1.85
PRE2YPR103W YLR462WO13556 202 aa3.48□□□□□ -1.85
PRE2YPR103W YEL075CP39972 122 aa3.48□□□□□ -1.85
PRE2YPR103W PEX12Q04370 399 aa3.48□□□□□ -1.85
PRE2YPR103W YLR030WQ07967 263 aa3.48□□□□□ -1.85
PRE2YPR103W BBP1Q12365 385 aa3.48□□□□□ -1.85
PRE2YPR103W YHR139C-AO13536 103 aa3.47□□□□□ -1.85
PRE2YPR103W RHO1P06780 209 aaKnown RBP3.47□□□□□ -1.85
PRE2YPR103W NTF2P33331 125 aaKnown RBP3.47□□□□□ -1.85
PRE2YPR103W RTR1P40084 226 aaPredicted RBP3.47□□□□□ -1.85
PRE2YPR103W YGL159WP53110 370 aa3.47□□□□□ -1.85
PRE2YPR103W YPR172WQ06608 200 aa3.47□□□□□ -1.85
PRE2YPR103W SNA3P14359 133 aa3.46□□□□□ -1.86
PRE2YPR103W VPS21P36017 210 aaKnown RBP3.46□□□□□ -1.86
PRE2YPR103W YGP1P38616 354 aaKnown RBP3.46□□□□□ -1.86
PRE2YPR103W SMD3P43321 101 aaKnown RBP3.46□□□□□ -1.86
PRE2YPR103W YJR149WP47177 404 aa3.46□□□□□ -1.86
PRE2YPR103W SAS5Q99314 248 aa3.46□□□□□ -1.86
PRE2YPR103W KRE5P22023 1365 aa3.46□□□□□ -1.86
PRE2YPR103W CLB6P32943 380 aa3.45□□□□□ -1.86
PRE2YPR103W TOS8P53147 276 aa3.45□□□□□ -1.86
PRE2YPR103W SLM2P53955 656 aa3.45□□□□□ -1.86
PRE2YPR103W FAR8Q05040 523 aa3.45□□□□□ -1.86
PRE2YPR103W SUE1Q06524 206 aa3.45□□□□□ -1.86
PRE2YPR103W ERG24P32462 438 aaKnown RBP3.44□□□□□ -1.86
PRE2YPR103W COS8P38723 381 aa3.44□□□□□ -1.86
PRE2YPR103W OTU1P43558 301 aa3.44□□□□□ -1.86
PRE2YPR103W TRM9P49957 279 aa3.44□□□□□ -1.86
PRE2YPR103W DCR2Q05924 578 aa3.44□□□□□ -1.86
PRE2YPR103W GCN2P15442 1659 aa3.43□□□□□ -1.86
PRE2YPR103W ARG80P07249 177 aa3.43□□□□□ -1.86
PRE2YPR103W SCO1P23833 295 aa3.43□□□□□ -1.86
PRE2YPR103W CUE1P38428 203 aa3.43□□□□□ -1.86
PRE2YPR103W URA8P38627 578 aaPredicted RBP3.43□□□□□ -1.86
PRE2YPR103W DSK2P48510 373 aa3.43□□□□□ -1.86
PRE2YPR103W INM2Q05533 292 aa3.43□□□□□ -1.86
PRE2YPR103W CDC10P25342 322 aaKnown RBP3.42□□□□□ -1.86
PRE2YPR103W BMH2P34730 273 aaKnown RBP3.42□□□□□ -1.86
PRE2YPR103W YMR144WP40214 342 aaKnown RBP3.42□□□□□ -1.86
PRE2YPR103W MRPL49P40858 161 aaPredicted RBP3.42□□□□□ -1.86
PRE2YPR103W COS6P53344 381 aa3.42□□□□□ -1.86
PRE2YPR103W RGM1Q00453 211 aa3.42□□□□□ -1.86
PRE2YPR103W CDD1Q06549 142 aa3.42□□□□□ -1.86
PRE2YPR103W RRP5Q05022 1729 aaKnown RBP3.41□□□□□ -1.86
PRE2YPR103W THP2O13539 261 aaKnown RBP3.41□□□□□ -1.86
PRE2YPR103W COX5AP00424 153 aa3.41□□□□□ -1.86
PRE2YPR103W MIC12P38341 106 aa3.41□□□□□ -1.86
PRE2YPR103W RTC3P38804 111 aaPredicted RBP3.41□□□□□ -1.86
PRE2YPR103W YHR125WP38831 101 aa3.41□□□□□ -1.86
PRE2YPR103W CTR2P38865 189 aa3.41□□□□□ -1.86
PRE2YPR103W GTR2P53290 341 aa3.41□□□□□ -1.86
PRE2YPR103W IPP1P00817 287 aaKnown RBP3.4□□□□□ -1.87
PRE2YPR103W Q0255P03881 472 aa3.4□□□□□ -1.87
PRE2YPR103W BCY1P07278 416 aaKnown RBP3.4□□□□□ -1.87
PRE2YPR103W YHR032W-AP0C5N6 59 aa3.4□□□□□ -1.87
PRE2YPR103W VMA6P32366 345 aaKnown RBP3.4□□□□□ -1.87
PRE2YPR103W YHL026CP38740 315 aa3.4□□□□□ -1.87
PRE2YPR103W MSS2P40990 351 aa3.4□□□□□ -1.87
PRE2YPR103W RPA43P46669 326 aa3.4□□□□□ -1.87
PRE2YPR103W MCM22P47167 239 aa3.4□□□□□ -1.87
PRE2YPR103W RUD3Q12234 484 aaKnown RBP3.4□□□□□ -1.87
PRE2YPR103W NUP192P47054 1683 aa3.39□□□□□ -1.87
PRE2YPR103W CCA1P21269 546 aa3.39□□□□□ -1.87
PRE2YPR103W RPL24BP24000 155 aaKnown RBP3.39□□□□□ -1.87
PRE2YPR103W ARC15P40518 154 aaRIP-Chip data3.39□□□□□ -1.87not detected
PRE2YPR103W CAT5P41735 233 aa3.39□□□□□ -1.87
PRE2YPR103W GCN20P43535 752 aaKnown RBP3.39□□□□□ -1.87
PRE2YPR103W TY3B-IQ7LHG5 1498 aaKnown RBP3.39□□□□□ -1.87
PRE2YPR103W SPT3P06844 337 aa3.38□□□□□ -1.87
PRE2YPR103W DSF1P0CX08 502 aa3.38□□□□□ -1.87
PRE2YPR103W YNR073CP0CX09 502 aa3.38□□□□□ -1.87
PRE2YPR103W YMR31P19955 123 aa3.38□□□□□ -1.87
PRE2YPR103W SCM4P32564 187 aa3.38□□□□□ -1.87
PRE2YPR103W YPT52P36018 234 aaKnown RBP3.38□□□□□ -1.87
PRE2YPR103W PEX17P40155 199 aa3.38□□□□□ -1.87
PRE2YPR103W NIP7Q08962 181 aaKnown RBP3.38□□□□□ -1.87
PRE2YPR103W YPL257WQ08974 193 aa3.38□□□□□ -1.87
PRE2YPR103W TPO4Q12256 659 aa3.38□□□□□ -1.87
PRE2YPR103W HTL1Q9URQ5 78 aa3.38□□□□□ -1.87
PRE2YPR103W ROM2P51862 1356 aaKnown RBP3.38□□□□□ -1.87
PRE2YPR103W PPA2P28239 310 aa3.37□□□□□ -1.87
PRE2YPR103W RIB1P38066 345 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms