RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W MRPL6P32904 214 aa3.22□□□□□ -1.89
RET3YPL010W CUE1P38428 203 aa3.22□□□□□ -1.89
RET3YPL010W NOP16P40007 231 aaKnown RBP3.22□□□□□ -1.89
RET3YPL010W DLS1P40366 167 aa3.22□□□□□ -1.89
RET3YPL010W DUO1P53168 247 aaKnown RBP3.22□□□□□ -1.89
RET3YPL010W VOA1P53262 265 aa3.22□□□□□ -1.89
RET3YPL010W AAH1P53909 347 aa3.22□□□□□ -1.89
RET3YPL010W SPG4Q04438 115 aa3.22□□□□□ -1.89
RET3YPL010W YDR114CQ04597 100 aa3.22□□□□□ -1.89
RET3YPL010W YMR226CQ05016 267 aaKnown RBP3.22□□□□□ -1.89
RET3YPL010W VCX1Q99385 411 aa3.22□□□□□ -1.89
RET3YPL010W RPL25P04456 142 aaKnown RBP3.21□□□□□ -1.9
RET3YPL010W SIR2P06700 562 aa3.21□□□□□ -1.9
RET3YPL010W YGL041W-AP0C5N3 154 aa3.21□□□□□ -1.9
RET3YPL010W SNF4P12904 322 aa3.21□□□□□ -1.9
RET3YPL010W BGL2P15703 313 aaKnown RBP3.21□□□□□ -1.9
RET3YPL010W PTP2P29461 750 aa3.21□□□□□ -1.9
RET3YPL010W AFG1P32317 509 aa3.21□□□□□ -1.9
RET3YPL010W VPS17P32913 551 aa3.21□□□□□ -1.9
RET3YPL010W ECT1P33412 323 aa3.21□□□□□ -1.9
RET3YPL010W THI2P38141 450 aa3.21□□□□□ -1.9
RET3YPL010W SDS24P38314 527 aa3.21□□□□□ -1.9
RET3YPL010W THO1P40040 218 aaKnown RBP3.21□□□□□ -1.9
RET3YPL010W RRG9P40156 214 aa3.21□□□□□ -1.9
RET3YPL010W AVT4P50944 713 aa3.21□□□□□ -1.9
RET3YPL010W OKP1P53298 406 aa3.21□□□□□ -1.9
RET3YPL010W YDR239CQ03780 787 aa3.21□□□□□ -1.9
RET3YPL010W LUC7Q07508 261 aaPredicted RBP3.21□□□□□ -1.9
RET3YPL010W GRC3Q07845 632 aa3.21□□□□□ -1.9
RET3YPL010W YOR029WQ12243 111 aa3.21□□□□□ -1.9
RET3YPL010W NOP1P15646 327 aaKnown RBP3.2□□□□□ -1.9
RET3YPL010W OAC1P32332 324 aa3.2□□□□□ -1.9
RET3YPL010W YKL075CP36083 450 aa3.2□□□□□ -1.9
RET3YPL010W SWD2P36104 329 aaPredicted RBP3.2□□□□□ -1.9
RET3YPL010W PDX3P38075 228 aaKnown RBP3.2□□□□□ -1.9
RET3YPL010W ADH5P38113 351 aaKnown RBP3.2□□□□□ -1.9
RET3YPL010W DDI1P40087 428 aa3.2□□□□□ -1.9
RET3YPL010W RIO2P40160 425 aaKnown RBP3.2□□□□□ -1.9
RET3YPL010W AGP3P43548 558 aa3.2□□□□□ -1.9
RET3YPL010W RPA43P46669 326 aa3.2□□□□□ -1.9
RET3YPL010W ATG27P46989 271 aa3.2□□□□□ -1.9
RET3YPL010W TTI2P47168 421 aa3.2□□□□□ -1.9
RET3YPL010W YGL159WP53110 370 aa3.2□□□□□ -1.9
RET3YPL010W SAY1P53324 424 aa3.2□□□□□ -1.9
RET3YPL010W SNZ1Q03148 297 aa3.2□□□□□ -1.9
RET3YPL010W HOT1Q03213 719 aa3.2□□□□□ -1.9
RET3YPL010W PST2Q12335 198 aaKnown RBP3.2□□□□□ -1.9
RET3YPL010W BBP1Q12365 385 aa3.2□□□□□ -1.9
RET3YPL010W EAF3Q12432 401 aa3.2□□□□□ -1.9
RET3YPL010W CDC28P00546 298 aaKnown RBP3.19□□□□□ -1.9
RET3YPL010W FBA1P14540 359 aaKnown RBP3.19□□□□□ -1.9
RET3YPL010W UBC8P28263 218 aa3.19□□□□□ -1.9
RET3YPL010W IMP1P28627 190 aa3.19□□□□□ -1.9
RET3YPL010W CBT1P36038 271 aaPredicted RBP3.19□□□□□ -1.9
RET3YPL010W DIM1P41819 318 aaKnown RBP3.19□□□□□ -1.9
RET3YPL010W SWP82P43554 623 aa3.19□□□□□ -1.9
RET3YPL010W ERJ5P43613 295 aaPredicted RBP3.19□□□□□ -1.9
RET3YPL010W RMR1P53060 241 aa3.19□□□□□ -1.9
RET3YPL010W YLR152CP54072 576 aa3.19□□□□□ -1.9
RET3YPL010W SRL4Q03085 281 aa3.19□□□□□ -1.9
RET3YPL010W ARP10Q04549 284 aa3.19□□□□□ -1.9
RET3YPL010W UPS1Q05776 175 aa3.19□□□□□ -1.9
RET3YPL010W TSR2Q06672 205 aaKnown RBP3.19□□□□□ -1.9
RET3YPL010W MRX9Q07349 420 aaKnown RBP3.19□□□□□ -1.9
RET3YPL010W RFM1Q12192 310 aa3.19□□□□□ -1.9
RET3YPL010W MRPL23Q12487 163 aaPredicted RBP3.19□□□□□ -1.9
RET3YPL010W KIN28P06242 306 aa3.18□□□□□ -1.9
RET3YPL010W YHR212W-AP0CX91 67 aa3.18□□□□□ -1.9
RET3YPL010W RNA14P25298 677 aaKnown RBP3.18□□□□□ -1.9
RET3YPL010W DPH5P32469 300 aaPredicted RBP3.18□□□□□ -1.9
RET3YPL010W YBR144CP34215 104 aa3.18□□□□□ -1.9
RET3YPL010W SSH1P38353 490 aaKnown RBP3.18□□□□□ -1.9
RET3YPL010W SOP4P39543 234 aaPredicted RBP3.18□□□□□ -1.9
RET3YPL010W MRX5P47007 382 aa3.18□□□□□ -1.9
RET3YPL010W YJR056CP47115 236 aa3.18□□□□□ -1.9
RET3YPL010W SSN8P47821 323 aa3.18□□□□□ -1.9
RET3YPL010W YIP1P53039 248 aa3.18□□□□□ -1.9
RET3YPL010W YGR016WP53209 190 aa3.18□□□□□ -1.9
RET3YPL010W POP6P53218 158 aa3.18□□□□□ -1.9
RET3YPL010W COG5P53951 403 aa3.18□□□□□ -1.9
RET3YPL010W MRPL13Q02204 264 aa3.18□□□□□ -1.9
RET3YPL010W RPL21AQ02753 160 aaKnown RBP3.18□□□□□ -1.9
RET3YPL010W YMR099CQ03161 297 aaKnown RBP3.18□□□□□ -1.9
RET3YPL010W RBS1Q05672 457 aaKnown RBP3.18□□□□□ -1.9
RET3YPL010W YLR173WQ06247 608 aa3.18□□□□□ -1.9
RET3YPL010W VAM3Q12241 283 aa3.18□□□□□ -1.9
RET3YPL010W RPL21BQ12672 160 aaKnown RBP3.18□□□□□ -1.9
RET3YPL010W COX2P00410 251 aa3.17□□□□□ -1.9
RET3YPL010W ADK1P07170 222 aaKnown RBP3.17□□□□□ -1.9
RET3YPL010W OLE1P21147 510 aaKnown RBP3.17□□□□□ -1.9
RET3YPL010W YCR101CP25607 182 aa3.17□□□□□ -1.9
RET3YPL010W RAD23P32628 398 aaKnown RBP3.17□□□□□ -1.9
RET3YPL010W RCN1P36054 211 aa3.17□□□□□ -1.9
RET3YPL010W PRS4P38063 326 aaPredicted RBP3.17□□□□□ -1.9
RET3YPL010W PRS2P38620 318 aaKnown RBP3.17□□□□□ -1.9
RET3YPL010W FIP1P45976 327 aa3.17□□□□□ -1.9
RET3YPL010W TMA22P47089 198 aaPredicted RBP3.17□□□□□ -1.9
RET3YPL010W PHB2P50085 310 aa3.17□□□□□ -1.9
RET3YPL010W YMD8Q03697 442 aa3.17□□□□□ -1.9
RET3YPL010W PEX30Q06169 523 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 172.9 ms