RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C GRH1Q04410 372 aaKnown RBP1.03□□□□□ -2.24
RPL40BYKR094C ATG38Q05789 226 aaKnown RBP1.03□□□□□ -2.24
RPL40BYKR094C ATG39Q06159 398 aa1.03□□□□□ -2.24
RPL40BYKR094C YLR030WQ07967 263 aa1.03□□□□□ -2.24
RPL40BYKR094C FEX1Q08913 375 aa1.03□□□□□ -2.24
RPL40BYKR094C FEX2Q08991 375 aa1.03□□□□□ -2.24
RPL40BYKR094C TPO4Q12256 659 aa1.03□□□□□ -2.24
RPL40BYKR094C EMP46Q12396 444 aa1.03□□□□□ -2.24
RPL40BYKR094C MHT1Q12525 324 aa1.03□□□□□ -2.24
RPL40BYKR094C YDR157WA0A023PZE8 133 aa1.02□□□□□ -2.25
RPL40BYKR094C CDC28P00546 298 aaKnown RBP1.02□□□□□ -2.25
RPL40BYKR094C RPL25P04456 142 aaKnown RBP1.02□□□□□ -2.25
RPL40BYKR094C RPL9AP05738 191 aaKnown RBP1.02□□□□□ -2.25
RPL40BYKR094C YPR170W-BP0C5R9 85 aa1.02□□□□□ -2.25
RPL40BYKR094C RAD9P14737 1309 aa1.02□□□□□ -2.25
RPL40BYKR094C GCN3P14741 305 aa1.02□□□□□ -2.25
RPL40BYKR094C MER1P16523 270 aa1.02□□□□□ -2.25
RPL40BYKR094C KRE1P17260 313 aa1.02□□□□□ -2.25
RPL40BYKR094C YPK2P18961 677 aa1.02□□□□□ -2.25
RPL40BYKR094C DBF2P22204 572 aa1.02□□□□□ -2.25
RPL40BYKR094C ATG22P25568 528 aa1.02□□□□□ -2.25
RPL40BYKR094C MIG1P27705 504 aa1.02□□□□□ -2.25
RPL40BYKR094C APS1P35181 156 aa1.02□□□□□ -2.25
RPL40BYKR094C YBR063CP38083 404 aa1.02□□□□□ -2.25
RPL40BYKR094C YHL026CP38740 315 aa1.02□□□□□ -2.25
RPL40BYKR094C AST2P39945 430 aaKnown RBP1.02□□□□□ -2.25
RPL40BYKR094C PEX17P40155 199 aa1.02□□□□□ -2.25
RPL40BYKR094C YRB2P40517 327 aa1.02□□□□□ -2.25
RPL40BYKR094C YIL001WP40560 513 aa1.02□□□□□ -2.25
RPL40BYKR094C FAR7P43592 221 aa1.02□□□□□ -2.25
RPL40BYKR094C DSK2P48510 373 aa1.02□□□□□ -2.25
RPL40BYKR094C RPL9BP51401 191 aaKnown RBP1.02□□□□□ -2.25
RPL40BYKR094C MGA1P53050 456 aa1.02□□□□□ -2.25
RPL40BYKR094C PRM8P53174 237 aa1.02□□□□□ -2.25
RPL40BYKR094C ERV29P53337 310 aa1.02□□□□□ -2.25
RPL40BYKR094C PDR17P53844 350 aa1.02□□□□□ -2.25
RPL40BYKR094C PRM15Q03262 622 aa1.02□□□□□ -2.25
RPL40BYKR094C PEX12Q04370 399 aa1.02□□□□□ -2.25
RPL40BYKR094C FCF1Q05498 189 aaPredicted RBP1.02□□□□□ -2.25
RPL40BYKR094C MSA1Q08471 629 aa1.02□□□□□ -2.25
RPL40BYKR094C ABP140Q08641 628 aaKnown RBP1.02□□□□□ -2.25
RPL40BYKR094C NIP7Q08962 181 aaKnown RBP1.02□□□□□ -2.25
RPL40BYKR094C CHD1P32657 1468 aa1.01□□□□□ -2.25
RPL40BYKR094C RFA3P26755 122 aaKnown RBP1.01□□□□□ -2.25
RPL40BYKR094C OAC1P32332 324 aa1.01□□□□□ -2.25
RPL40BYKR094C SPS18P32572 300 aa1.01□□□□□ -2.25
RPL40BYKR094C PRX1P34227 261 aaKnown RBP1.01□□□□□ -2.25
RPL40BYKR094C YCR087C-AP37263 153 aa1.01□□□□□ -2.25
RPL40BYKR094C RPF1P38805 295 aaKnown RBP1.01□□□□□ -2.25
RPL40BYKR094C YHR125WP38831 101 aa1.01□□□□□ -2.25
RPL40BYKR094C BMT5P40493 336 aa1.01□□□□□ -2.25
RPL40BYKR094C YJR056CP47115 236 aa1.01□□□□□ -2.25
RPL40BYKR094C SSU72P53538 206 aaPredicted RBP1.01□□□□□ -2.25
RPL40BYKR094C SNZ1Q03148 297 aa1.01□□□□□ -2.25
RPL40BYKR094C TLG1Q03322 224 aa1.01□□□□□ -2.25
RPL40BYKR094C SUE1Q06524 206 aa1.01□□□□□ -2.25
RPL40BYKR094C CDD1Q06549 142 aa1.01□□□□□ -2.25
RPL40BYKR094C GPM2Q12008 311 aa1.01□□□□□ -2.25
RPL40BYKR094C AGC1Q12482 902 aa1.01□□□□□ -2.25
RPL40BYKR094C NOT5Q12514 560 aaPredicted RBP1.01□□□□□ -2.25
RPL40BYKR094C YIL177CP40434 1758 aa1.01□□□□□ -2.25
RPL40BYKR094C YJL225CP40889 1758 aa1.01□□□□□ -2.25
RPL40BYKR094C TUS1Q06412 1307 aa1□□□□□ -2.25
RPL40BYKR094C Q0255P03881 472 aa1□□□□□ -2.25
RPL40BYKR094C SGA1P08019 549 aa1□□□□□ -2.25
RPL40BYKR094C PUT1P09368 476 aa1□□□□□ -2.25
RPL40BYKR094C YHR032W-AP0C5N6 59 aa1□□□□□ -2.25
RPL40BYKR094C CCA1P21269 546 aa1□□□□□ -2.25
RPL40BYKR094C PTM1P32857 523 aa1□□□□□ -2.25
RPL40BYKR094C TAF14P35189 244 aa1□□□□□ -2.25
RPL40BYKR094C CAF4P36130 643 aa1□□□□□ -2.25
RPL40BYKR094C MRPL28P36527 147 aa1□□□□□ -2.25
RPL40BYKR094C GRE3P38715 327 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
RPL40BYKR094C YER084WP40057 128 aa1□□□□□ -2.25
RPL40BYKR094C COG3P40094 801 aa1□□□□□ -2.25
RPL40BYKR094C TIF34P40217 347 aaKnown RBP1□□□□□ -2.25
RPL40BYKR094C RSM25P40496 264 aa1□□□□□ -2.25
RPL40BYKR094C PIR5P46999 287 aa1□□□□□ -2.25
RPL40BYKR094C TOS8P53147 276 aa1□□□□□ -2.25
RPL40BYKR094C MMS2P53152 137 aa1□□□□□ -2.25
RPL40BYKR094C LPP1Q04396 274 aa1□□□□□ -2.25
RPL40BYKR094C RDS3Q06835 107 aaPredicted RBP1□□□□□ -2.25
RPL40BYKR094C CLP1Q08685 445 aaPredicted RBP1□□□□□ -2.25
RPL40BYKR094C YOR268CQ08734 132 aa1□□□□□ -2.25
RPL40BYKR094C AKR2Q12013 749 aa1□□□□□ -2.25
RPL40BYKR094C TDA8Q6B2U8 126 aa1□□□□□ -2.25
RPL40BYKR094C CDC8P00572 216 aa0.99□□□□□ -2.25
RPL40BYKR094C MSW1P04803 379 aa0.99□□□□□ -2.25
RPL40BYKR094C RPL26AP05743 127 aaKnown RBP0.99□□□□□ -2.25
RPL40BYKR094C DPM1P14020 267 aaKnown RBP0.99□□□□□ -2.25
RPL40BYKR094C MRPS28P21771 286 aa0.99□□□□□ -2.25
RPL40BYKR094C SCM4P32564 187 aa0.99□□□□□ -2.25
RPL40BYKR094C SRY1P36007 326 aa0.99□□□□□ -2.25
RPL40BYKR094C POP4P38336 279 aa0.99□□□□□ -2.25
RPL40BYKR094C SEC72P39742 193 aaKnown RBP0.99□□□□□ -2.25
RPL40BYKR094C SNX4P47057 423 aa0.99□□□□□ -2.25
RPL40BYKR094C AIM25P47140 327 aa0.99□□□□□ -2.25
RPL40BYKR094C RPL26BP53221 127 aaKnown RBP0.99□□□□□ -2.25
RPL40BYKR094C NOP19P53317 196 aaPredicted RBP0.99□□□□□ -2.25
RPL40BYKR094C SLM2P53955 656 aa0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms