RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C UTP15Q04305 513 aaKnown RBP2.9□□□□□ -1.95
YIR040CYIR040C ERP1Q05359 219 aaKnown RBP2.9□□□□□ -1.95
YIR040CYIR040C UPS1Q05776 175 aa2.9□□□□□ -1.95
YIR040CYIR040C COQ9Q05779 260 aa2.9□□□□□ -1.95
YIR040CYIR040C SWC7Q06707 132 aa2.9□□□□□ -1.95
YIR040CYIR040C ASR1Q06834 288 aa2.9□□□□□ -1.95
YIR040CYIR040C GEP3Q08622 556 aa2.9□□□□□ -1.95
YIR040CYIR040C MCP1Q12106 302 aa2.9□□□□□ -1.95
YIR040CYIR040C ERV2Q12284 196 aa2.9□□□□□ -1.95
YIR040CYIR040C ORT1Q12375 292 aa2.9□□□□□ -1.95
YIR040CYIR040C MHT1Q12525 324 aa2.9□□□□□ -1.95
YIR040CYIR040C YLR412C-AQ3E742 68 aa2.9□□□□□ -1.95
YIR040CYIR040C ILV1P00927 576 aaKnown RBP2.89□□□□□ -1.95
YIR040CYIR040C AQY1P0CD91 305 aa2.89□□□□□ -1.95
YIR040CYIR040C YKR104WP0CE69 306 aa2.89□□□□□ -1.95
YIR040CYIR040C UBI4P0CG63 381 aaKnown RBP2.89□□□□□ -1.95
YIR040CYIR040C YCR102CP25608 368 aa2.89□□□□□ -1.95
YIR040CYIR040C BUB3P26449 341 aa2.89□□□□□ -1.95
YIR040CYIR040C SNC1P31109 117 aa2.89□□□□□ -1.95
YIR040CYIR040C YET1P35723 206 aa2.89□□□□□ -1.95
YIR040CYIR040C SWD2P36104 329 aaPredicted RBP2.89□□□□□ -1.95
YIR040CYIR040C YBR096WP38256 230 aa2.89□□□□□ -1.95
YIR040CYIR040C YHR130CP38834 111 aa2.89□□□□□ -1.95
YIR040CYIR040C NSG1P38837 291 aa2.89□□□□□ -1.95
YIR040CYIR040C YAL037WP39728 267 aa2.89□□□□□ -1.95
YIR040CYIR040C GAT2P40209 560 aa2.89□□□□□ -1.95
YIR040CYIR040C PRE5P40302 234 aaKnown RBP2.89□□□□□ -1.95
YIR040CYIR040C YIL152WP40455 235 aa2.89□□□□□ -1.95
YIR040CYIR040C CAT5P41735 233 aa2.89□□□□□ -1.95
YIR040CYIR040C POP1P41812 875 aa2.89□□□□□ -1.95
YIR040CYIR040C YFL015CP43578 164 aa2.89□□□□□ -1.95
YIR040CYIR040C OST2P46964 130 aa2.89□□□□□ -1.95
YIR040CYIR040C ALG13P53178 202 aa2.89□□□□□ -1.95
YIR040CYIR040C DAD3P69850 94 aa2.89□□□□□ -1.95
YIR040CYIR040C DIG1Q03063 452 aaKnown RBP2.89□□□□□ -1.95
YIR040CYIR040C SDC1Q03323 175 aa2.89□□□□□ -1.95
YIR040CYIR040C MSS11Q03825 758 aa2.89□□□□□ -1.95
YIR040CYIR040C YMR087WQ04299 284 aa2.89□□□□□ -1.95
YIR040CYIR040C HSP31Q04432 237 aa2.89□□□□□ -1.95
YIR040CYIR040C YHC1Q05900 231 aaKnown RBP2.89□□□□□ -1.95
YIR040CYIR040C CTR3Q06686 241 aa2.89□□□□□ -1.95
YIR040CYIR040C RRS1Q08746 203 aaKnown RBP2.89□□□□□ -1.95
YIR040CYIR040C YOR387CQ08910 206 aa2.89□□□□□ -1.95
YIR040CYIR040C RAD28Q12021 506 aa2.89□□□□□ -1.95
YIR040CYIR040C YLR118CQ12354 227 aa2.89□□□□□ -1.95
YIR040CYIR040C ICT1Q12385 394 aa2.89□□□□□ -1.95
YIR040CYIR040C EAF3Q12432 401 aa2.89□□□□□ -1.95
YIR040CYIR040C DDP1Q99321 188 aaKnown RBP2.89□□□□□ -1.95
YIR040CYIR040C NUP159P40477 1460 aa2.89□□□□□ -1.95
YIR040CYIR040C DNA2P38859 1522 aa2.88□□□□□ -1.95
YIR040CYIR040C MES1P00958 751 aaKnown RBP2.88□□□□□ -1.95
YIR040CYIR040C SEC4P07560 215 aaKnown RBP2.88□□□□□ -1.95
YIR040CYIR040C CAP2P13517 287 aa2.88□□□□□ -1.95
YIR040CYIR040C BGL2P15703 313 aaKnown RBP2.88□□□□□ -1.95
YIR040CYIR040C PHO80P20052 293 aa2.88□□□□□ -1.95
YIR040CYIR040C ACB1P31787 87 aa2.88□□□□□ -1.95
YIR040CYIR040C OAC1P32332 324 aa2.88□□□□□ -1.95
YIR040CYIR040C DSS4P32601 143 aa2.88□□□□□ -1.95
YIR040CYIR040C YSC83P32792 385 aa2.88□□□□□ -1.95
YIR040CYIR040C MRPL28P36527 147 aa2.88□□□□□ -1.95
YIR040CYIR040C YBR013CP38215 129 aa2.88□□□□□ -1.95
YIR040CYIR040C YGP1P38616 354 aaKnown RBP2.88□□□□□ -1.95
YIR040CYIR040C YHL026CP38740 315 aa2.88□□□□□ -1.95
YIR040CYIR040C YHK8P38776 514 aa2.88□□□□□ -1.95
YIR040CYIR040C LYS1P38998 373 aaRIP-Chip data2.88□□□□□ -1.95not detected
YIR040CYIR040C YEL075CP39972 122 aa2.88□□□□□ -1.95
YIR040CYIR040C SMX2P40204 77 aaKnown RBP2.88□□□□□ -1.95
YIR040CYIR040C APQ12P40532 138 aa2.88□□□□□ -1.95
YIR040CYIR040C SNO3P43544 222 aa2.88□□□□□ -1.95
YIR040CYIR040C MOB2P43563 287 aa2.88□□□□□ -1.95
YIR040CYIR040C CTK2P46962 323 aa2.88□□□□□ -1.95
YIR040CYIR040C YGL230CP53074 147 aa2.88□□□□□ -1.95
YIR040CYIR040C MTM1P53320 366 aa2.88□□□□□ -1.95
YIR040CYIR040C RHO4Q00246 291 aa2.88□□□□□ -1.95
YIR040CYIR040C RSM10Q03201 203 aa2.88□□□□□ -1.95
YIR040CYIR040C RCE1Q03530 315 aa2.88□□□□□ -1.95
YIR040CYIR040C CUE4Q04201 117 aaPredicted RBP2.88□□□□□ -1.95
YIR040CYIR040C YOL024WQ08172 172 aa2.88□□□□□ -1.95
YIR040CYIR040C RLM1Q12224 676 aa2.88□□□□□ -1.95
YIR040CYIR040C PST1Q12355 444 aa2.88□□□□□ -1.95
YIR040CYIR040C PDR11P40550 1411 aa2.87□□□□□ -1.95
YIR040CYIR040C COX3P00420 269 aa2.87□□□□□ -1.95
YIR040CYIR040C BI2P03873 423 aa2.87□□□□□ -1.95
YIR040CYIR040C SIR2P06700 562 aa2.87□□□□□ -1.95
YIR040CYIR040C RAD52P06778 471 aaKnown RBP2.87□□□□□ -1.95
YIR040CYIR040C YER039C-AP0CD97 72 aa2.87□□□□□ -1.95
YIR040CYIR040C YCR007CP25354 239 aa2.87□□□□□ -1.95
YIR040CYIR040C ELO2P25358 347 aa2.87□□□□□ -1.95
YIR040CYIR040C STP22P25604 385 aa2.87□□□□□ -1.95
YIR040CYIR040C POP5P28005 173 aa2.87□□□□□ -1.95
YIR040CYIR040C NTF2P33331 125 aaKnown RBP2.87□□□□□ -1.95
YIR040CYIR040C SKN1P33336 771 aa2.87□□□□□ -1.95
YIR040CYIR040C YBR241CP38142 488 aa2.87□□□□□ -1.95
YIR040CYIR040C YHL049CP38722 271 aa2.87□□□□□ -1.95
YIR040CYIR040C NDT80P38830 627 aa2.87□□□□□ -1.95
YIR040CYIR040C FAA2P39518 744 aa2.87□□□□□ -1.95
YIR040CYIR040C ELO1P39540 310 aa2.87□□□□□ -1.95
YIR040CYIR040C YEA4P40004 342 aa2.87□□□□□ -1.95
YIR040CYIR040C SPC25P40014 221 aa2.87□□□□□ -1.95
YIR040CYIR040C TIR3P40552 269 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms