RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	YGL117W	P53133	265 aa		2.99	□□□□□ -1.93
SGN1	YIR001C	RPL21A	Q02753	160 aa	Known RBP	2.99	□□□□□ -1.93
SGN1	YIR001C	YMD8	Q03697	442 aa		2.99	□□□□□ -1.93
SGN1	YIR001C	LUC7	Q07508	261 aa	Predicted RBP	2.99	□□□□□ -1.93
SGN1	YIR001C	FCY1	Q12178	158 aa		2.99	□□□□□ -1.93
SGN1	YIR001C	RPL21B	Q12672	160 aa	Known RBP	2.99	□□□□□ -1.93
SGN1	YIR001C	VCX1	Q99385	411 aa		2.99	□□□□□ -1.93
SGN1	YIR001C	CDC28	P00546	298 aa	Known RBP	2.98	□□□□□ -1.93
SGN1	YIR001C	REP2	P03872	296 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	CBT1	P36038	271 aa	Predicted RBP	2.98	□□□□□ -1.93
SGN1	YIR001C	RCN1	P36054	211 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	THI2	P38141	450 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	RPS0B	P46654	252 aa	Known RBP	2.98	□□□□□ -1.93
SGN1	YIR001C	RPA43	P46669	326 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	SSN8	P47821	323 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	YIP1	P53039	248 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	POP6	P53218	158 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	YGR054W	P53235	642 aa	Known RBP	2.98	□□□□□ -1.93
SGN1	YIR001C	SRL4	Q03085	281 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	UPS1	Q05776	175 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	TSR2	Q06672	205 aa	Known RBP	2.98	□□□□□ -1.93
SGN1	YIR001C	MDM36	Q06820	579 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	MRX9	Q07349	420 aa	Known RBP	2.98	□□□□□ -1.93
SGN1	YIR001C	BBP1	Q12365	385 aa		2.98	□□□□□ -1.93
SGN1	YIR001C	OLE1	P21147	510 aa	Known RBP	2.97	□□□□□ -1.93
SGN1	YIR001C	RNA14	P25298	677 aa	Known RBP	2.97	□□□□□ -1.93
SGN1	YIR001C	SWD2	P36104	329 aa	Predicted RBP	2.97	□□□□□ -1.93
SGN1	YIR001C	SHE1	P38200	338 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	MDM31	P38880	579 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	AIM10	P39965	576 aa	Known RBP	2.97	□□□□□ -1.93
SGN1	YIR001C	FIP1	P45976	327 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	MRX5	P47007	382 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	SMP3	Q04174	516 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	YLR283W	Q05867	314 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	PEX30	Q06169	523 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	LOT6	Q07923	191 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	YOR186W	Q08560	144 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	VAM3	Q12241	283 aa		2.97	□□□□□ -1.93
SGN1	YIR001C	MPD1	Q12404	318 aa	Known RBP	2.97	□□□□□ -1.93
SGN1	YIR001C	ADK1	P07170	222 aa	Known RBP	2.96	□□□□□ -1.94
SGN1	YIR001C	YHR212W-A	P0CX91	67 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	PET122	P10355	254 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	MDM10	P18409	493 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	CNE1	P27825	502 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	RAD23	P32628	398 aa	Known RBP	2.96	□□□□□ -1.94
SGN1	YIR001C	SNC2	P33328	115 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	YBR144C	P34215	104 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	PMU1	P36069	295 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	YKL075C	P36083	450 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	PRS4	P38063	326 aa	Predicted RBP	2.96	□□□□□ -1.94
SGN1	YIR001C	CIN4	P39110	191 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	SOP4	P39543	234 aa	Predicted RBP	2.96	□□□□□ -1.94
SGN1	YIR001C	FMC1	P40491	155 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	YFL015C	P43578	164 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	LYS20	P48570	428 aa	Known RBP	2.96	□□□□□ -1.94
SGN1	YIR001C	GPG1	P53130	126 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	COG5	P53951	403 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	HSK3	P69852	69 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	YMR099C	Q03161	297 aa	Known RBP	2.96	□□□□□ -1.94
SGN1	YIR001C	MIX17	Q03667	156 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	RRP17	Q04031	235 aa	Predicted RBP	2.96	□□□□□ -1.94
SGN1	YIR001C	ORM2	Q06144	216 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	GEP3	Q08622	556 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	YOL114C	Q12322	202 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	JID1	Q12350	301 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	ATO3	Q12359	275 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	YPR1	Q12458	312 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	MRPL23	Q12487	163 aa	Predicted RBP	2.96	□□□□□ -1.94
SGN1	YIR001C	HUT1	Q12520	339 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	ATG40	Q99325	256 aa		2.96	□□□□□ -1.94
SGN1	YIR001C	IDP1	P21954	428 aa	Known RBP	2.95	□□□□□ -1.94
SGN1	YIR001C	ATG22	P25568	528 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	YCR061W	P25639	631 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	INO2	P26798	304 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	FUN26	P31381	517 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	VMA6	P32366	345 aa	Known RBP	2.95	□□□□□ -1.94
SGN1	YIR001C	NDC1	P32500	655 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	ZRT3	P34240	503 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	CPR5	P35176	225 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	HOT13	P36078	116 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	CDS1	P38221	457 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	PRS2	P38620	318 aa	Known RBP	2.95	□□□□□ -1.94
SGN1	YIR001C	FLO5	P38894	1075 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	DDI1	P40087	428 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	YRB2	P40517	327 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	VPS55	P47111	140 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	GLO1	P50107	326 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	YGL262W	P53054	175 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	YGL204C	P53089	101 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	RSM27	P53305	110 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	YMR087W	Q04299	284 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	HOR7	Q05827	59 aa		2.95	□□□□□ -1.94
SGN1	YIR001C	ATR1	P13090	542 aa		2.94	□□□□□ -1.94
SGN1	YIR001C	DPB2	P24482	689 aa	Predicted RBP	2.94	□□□□□ -1.94
SGN1	YIR001C	YCR101C	P25607	182 aa		2.94	□□□□□ -1.94
SGN1	YIR001C	ZUO1	P32527	433 aa	Known RBP	2.94	□□□□□ -1.94
SGN1	YIR001C	YBL010C	P32788	280 aa		2.94	□□□□□ -1.94
SGN1	YIR001C	YKL063C	P35725	167 aa		2.94	□□□□□ -1.94
SGN1	YIR001C	UMP1	P38293	148 aa		2.94	□□□□□ -1.94
SGN1	YIR001C	SDS24	P38314	527 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms