RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C YGR219WP53307 113 aa1.1□□□□□ -2.23
SMB1YER029C ERV29P53337 310 aa1.1□□□□□ -2.23
SMB1YER029C NOP13P53883 403 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
SMB1YER029C USB1Q12208 290 aaKnown RBP1.1□□□□□ -2.23
SMB1YER029C YOR020W-AQ3E824 90 aa1.1□□□□□ -2.23
SMB1YER029C RHO1P06780 209 aaKnown RBP1.09□□□□□ -2.23
SMB1YER029C YOL162WP0CF19 215 aa1.09□□□□□ -2.23
SMB1YER029C NTF2P33331 125 aaKnown RBP1.09□□□□□ -2.23
SMB1YER029C VPS21P36017 210 aaKnown RBP1.09□□□□□ -2.23
SMB1YER029C ECM33P38248 429 aaKnown RBP1.09□□□□□ -2.23
SMB1YER029C DSE2P38844 325 aa1.09□□□□□ -2.23
SMB1YER029C AVT2P39981 480 aa1.09□□□□□ -2.23
SMB1YER029C YKE4P40544 346 aa1.09□□□□□ -2.23
SMB1YER029C PRM10P42946 383 aa1.09□□□□□ -2.23
SMB1YER029C YJR056CP47115 236 aa1.09□□□□□ -2.23
SMB1YER029C LIA1P47120 325 aaKnown RBP1.09□□□□□ -2.23
SMB1YER029C NUP84P52891 726 aa1.09□□□□□ -2.23
SMB1YER029C ERG25P53045 309 aa1.09□□□□□ -2.23
SMB1YER029C YML096WQ04489 525 aa1.09□□□□□ -2.23
SMB1YER029C YLR283WQ05867 314 aa1.09□□□□□ -2.23
SMB1YER029C DCN1Q12395 269 aa1.09□□□□□ -2.23
SMB1YER029C FAS1P07149 2051 aaKnown RBP1.09□□□□□ -2.24
SMB1YER029C YPR170W-BP0C5R9 85 aa1.08□□□□□ -2.24
SMB1YER029C YGL010WP25338 174 aa1.08□□□□□ -2.24
SMB1YER029C YKR045CP36138 183 aa1.08□□□□□ -2.24
SMB1YER029C YBR063CP38083 404 aa1.08□□□□□ -2.24
SMB1YER029C ERV15P38312 142 aa1.08□□□□□ -2.24
SMB1YER029C YBR220CP38318 560 aa1.08□□□□□ -2.24
SMB1YER029C YER085CP40058 173 aa1.08□□□□□ -2.24
SMB1YER029C MCM22P47167 239 aa1.08□□□□□ -2.24
SMB1YER029C SSQ1Q05931 657 aaPredicted RBP1.08□□□□□ -2.24
SMB1YER029C HEM25Q07534 307 aa1.08□□□□□ -2.24
SMB1YER029C DRS2P39524 1355 aa1.08□□□□□ -2.24
SMB1YER029C BCY1P07278 416 aaKnown RBP1.07□□□□□ -2.24
SMB1YER029C YBR219CP38317 127 aa1.07□□□□□ -2.24
SMB1YER029C MIC12P38341 106 aa1.07□□□□□ -2.24
SMB1YER029C SVP26P38869 228 aa1.07□□□□□ -2.24
SMB1YER029C RPC17P47076 161 aa1.07□□□□□ -2.24
SMB1YER029C ALG13P53178 202 aa1.07□□□□□ -2.24
SMB1YER029C NUP49Q02199 472 aa1.07□□□□□ -2.24
SMB1YER029C YLR162WQ06235 118 aa1.07□□□□□ -2.24
SMB1YER029C CDC8P00572 216 aa1.06□□□□□ -2.24
SMB1YER029C URA6P15700 204 aa1.06□□□□□ -2.24
SMB1YER029C SRY1P36007 326 aa1.06□□□□□ -2.24
SMB1YER029C RTR1P40084 226 aaPredicted RBP1.06□□□□□ -2.24
SMB1YER029C COX15P40086 486 aa1.06□□□□□ -2.24
SMB1YER029C YNR062CP53748 327 aa1.06□□□□□ -2.24
SMB1YER029C ABF2Q02486 183 aa1.06□□□□□ -2.24
SMB1YER029C TRM12Q04235 462 aa1.06□□□□□ -2.24
SMB1YER029C SPG3Q04398 127 aaPredicted RBP1.06□□□□□ -2.24
SMB1YER029C CDC123Q05791 360 aa1.06□□□□□ -2.24
SMB1YER029C TPO4Q12256 659 aa1.06□□□□□ -2.24
SMB1YER029C THP2O13539 261 aaKnown RBP1.05□□□□□ -2.24
SMB1YER029C SPT3P06844 337 aa1.05□□□□□ -2.24
SMB1YER029C RPL2AP0CX45 254 aaKnown RBP1.05□□□□□ -2.24
SMB1YER029C RPL2BP0CX46 254 aaKnown RBP1.05□□□□□ -2.24
SMB1YER029C PET9P18239 318 aaKnown RBP1.05□□□□□ -2.24
SMB1YER029C YMR31P19955 123 aa1.05□□□□□ -2.24
SMB1YER029C DBF2P22204 572 aa1.05□□□□□ -2.24
SMB1YER029C PPA2P28239 310 aa1.05□□□□□ -2.24
SMB1YER029C VMA6P32366 345 aaKnown RBP1.05□□□□□ -2.24
SMB1YER029C BMH2P34730 273 aaKnown RBP1.05□□□□□ -2.24
SMB1YER029C URA8P38627 578 aaPredicted RBP1.05□□□□□ -2.24
SMB1YER029C DOG2P38773 246 aa1.05□□□□□ -2.24
SMB1YER029C RTC3P38804 111 aaPredicted RBP1.05□□□□□ -2.24
SMB1YER029C VTC1P40046 129 aaRIP-Chip data1.05□□□□□ -2.24not detected
SMB1YER029C AGE2P40529 298 aa1.05□□□□□ -2.24
SMB1YER029C MZM1Q03429 123 aaPredicted RBP1.05□□□□□ -2.24
SMB1YER029C YMD8Q03697 442 aa1.05□□□□□ -2.24
SMB1YER029C SML1Q04964 104 aa1.05□□□□□ -2.24
SMB1YER029C CDC28P00546 298 aaKnown RBP1.04□□□□□ -2.24
SMB1YER029C RPL24BP24000 155 aaKnown RBP1.04□□□□□ -2.24
SMB1YER029C UPS2P35200 230 aa1.04□□□□□ -2.24
SMB1YER029C IRC22P40006 225 aa1.04□□□□□ -2.24
SMB1YER029C RPL33BP41056 107 aaKnown RBP1.04□□□□□ -2.24
SMB1YER029C AIF1P52923 378 aa1.04□□□□□ -2.24
SMB1YER029C LPP1Q04396 274 aa1.04□□□□□ -2.24
SMB1YER029C CSI2Q08054 341 aa1.04□□□□□ -2.24
SMB1YER029C PSF1Q12488 208 aa1.04□□□□□ -2.24
SMB1YER029C ACC1Q00955 2233 aaKnown RBP1.03□□□□□ -2.24
SMB1YER029C RPL28P02406 149 aaKnown RBP1.03□□□□□ -2.24
SMB1YER029C ATG22P25568 528 aa1.03□□□□□ -2.24
SMB1YER029C MEI4P29467 408 aa1.03□□□□□ -2.24
SMB1YER029C ERG28P40030 148 aa1.03□□□□□ -2.24
SMB1YER029C PRE6P40303 254 aaKnown RBP1.03□□□□□ -2.24
SMB1YER029C RSM25P40496 264 aa1.03□□□□□ -2.24
SMB1YER029C OTU1P43558 301 aa1.03□□□□□ -2.24
SMB1YER029C BXI1P48558 297 aa1.03□□□□□ -2.24
SMB1YER029C MIC26P50087 233 aa1.03□□□□□ -2.24
SMB1YER029C BOL2P53082 120 aa1.03□□□□□ -2.24
SMB1YER029C FYV6P53913 173 aa1.03□□□□□ -2.24
SMB1YER029C BUD25P85052 153 aa1.03□□□□□ -2.24
SMB1YER029C GAS3Q03655 524 aa1.03□□□□□ -2.24
SMB1YER029C YKL183C-AQ3E765 70 aa1.03□□□□□ -2.24
SMB1YER029C LSO2Q3E772 92 aaKnown RBP1.03□□□□□ -2.24
SMB1YER029C SEY1Q99287 776 aa1.03□□□□□ -2.24
SMB1YER029C REP2P03872 296 aa1.02□□□□□ -2.25
SMB1YER029C ARG80P07249 177 aa1.02□□□□□ -2.25
SMB1YER029C YLR156WP0CE96 114 aa1.02□□□□□ -2.25
SMB1YER029C YLR159WP0CE97 114 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 89 ms