RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W DDI3P0CH64 225 aa1.16□□□□□ -2.22
VPS52YDR484W LDB7P38210 180 aa1.16□□□□□ -2.22
VPS52YDR484W YHR180WP38868 163 aa1.16□□□□□ -2.22
VPS52YDR484W YMD8Q03697 442 aa1.16□□□□□ -2.22
VPS52YDR484W DCN1Q12395 269 aa1.16□□□□□ -2.22
VPS52YDR484W YPL229WQ99395 206 aa1.16□□□□□ -2.22
VPS52YDR484W CDC8P00572 216 aa1.15□□□□□ -2.22
VPS52YDR484W RPO26P20435 155 aa1.15□□□□□ -2.22
VPS52YDR484W SVP26P38869 228 aa1.15□□□□□ -2.22
VPS52YDR484W YJR149WP47177 404 aa1.15□□□□□ -2.22
VPS52YDR484W NSA1P53136 463 aaPredicted RBP1.15□□□□□ -2.22
VPS52YDR484W DID2P69771 204 aa1.15□□□□□ -2.22
VPS52YDR484W BUD25P85052 153 aa1.15□□□□□ -2.22
VPS52YDR484W LSO2Q3E772 92 aaKnown RBP1.15□□□□□ -2.22
VPS52YDR484W BCY1P07278 416 aaKnown RBP1.15□□□□□ -2.23
VPS52YDR484W YER135CP40082 130 aa1.15□□□□□ -2.23
VPS52YDR484W PEX17P40155 199 aa1.15□□□□□ -2.23
VPS52YDR484W TRM9P49957 279 aa1.15□□□□□ -2.23
VPS52YDR484W ERV29P53337 310 aa1.15□□□□□ -2.23
VPS52YDR484W SPT3P06844 337 aa1.14□□□□□ -2.23
VPS52YDR484W YOL162WP0CF19 215 aa1.14□□□□□ -2.23
VPS52YDR484W PET9P18239 318 aaKnown RBP1.14□□□□□ -2.23
VPS52YDR484W CDC10P25342 322 aaKnown RBP1.14□□□□□ -2.23
VPS52YDR484W MSN4P33749 630 aa1.14□□□□□ -2.23
VPS52YDR484W VPS21P36017 210 aaKnown RBP1.14□□□□□ -2.23
VPS52YDR484W PRE6P40303 254 aaKnown RBP1.14□□□□□ -2.23
VPS52YDR484W RPC17P47076 161 aa1.14□□□□□ -2.23
VPS52YDR484W LIA1P47120 325 aaKnown RBP1.14□□□□□ -2.23
VPS52YDR484W TOS8P53147 276 aa1.14□□□□□ -2.23
VPS52YDR484W YNR062CP53748 327 aa1.14□□□□□ -2.23
VPS52YDR484W PSF1Q12488 208 aa1.14□□□□□ -2.23
VPS52YDR484W AVT2P39981 480 aa1.13□□□□□ -2.23
VPS52YDR484W COX15P40086 486 aa1.13□□□□□ -2.23
VPS52YDR484W AGE2P40529 298 aa1.13□□□□□ -2.23
VPS52YDR484W RPL33BP41056 107 aaKnown RBP1.13□□□□□ -2.23
VPS52YDR484W YPR170W-BP0C5R9 85 aa1.13□□□□□ -2.23
VPS52YDR484W MEI4P29467 408 aa1.13□□□□□ -2.23
VPS52YDR484W SSO1P32867 290 aa1.13□□□□□ -2.23
VPS52YDR484W NTF2P33331 125 aaKnown RBP1.13□□□□□ -2.23
VPS52YDR484W PGD1P40356 397 aa1.13□□□□□ -2.23
VPS52YDR484W ICE2P40499 491 aa1.13□□□□□ -2.23
VPS52YDR484W TIR3P40552 269 aa1.13□□□□□ -2.23
VPS52YDR484W YNL010WP53981 241 aaKnown RBP1.13□□□□□ -2.23
VPS52YDR484W YHR139C-AO13536 103 aa1.12□□□□□ -2.23
VPS52YDR484W MATALPHA1P0CY06 175 aa1.12□□□□□ -2.23
VPS52YDR484W HMLALPHA1P0CY07 175 aa1.12□□□□□ -2.23
VPS52YDR484W DOG2P38773 246 aa1.12□□□□□ -2.23
VPS52YDR484W AIF1P52923 378 aa1.12□□□□□ -2.23
VPS52YDR484W SML1Q04964 104 aa1.12□□□□□ -2.23
VPS52YDR484W CFT1Q06632 1357 aaKnown RBP1.12□□□□□ -2.23
VPS52YDR484W ATG22P25568 528 aa1.11□□□□□ -2.23
VPS52YDR484W YKR045CP36138 183 aa1.11□□□□□ -2.23
VPS52YDR484W YBR219CP38317 127 aa1.11□□□□□ -2.23
VPS52YDR484W IRC22P40006 225 aa1.11□□□□□ -2.23
VPS52YDR484W YER085CP40058 173 aa1.11□□□□□ -2.23
VPS52YDR484W NOP13P53883 403 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
VPS52YDR484W FYV6P53913 173 aa1.11□□□□□ -2.23
VPS52YDR484W LPP1Q04396 274 aa1.11□□□□□ -2.23
VPS52YDR484W DRS2P39524 1355 aa1.11□□□□□ -2.23
VPS52YDR484W REP2P03872 296 aa1.11□□□□□ -2.23
VPS52YDR484W URA6P15700 204 aa1.11□□□□□ -2.23
VPS52YDR484W RPL24BP24000 155 aaKnown RBP1.11□□□□□ -2.23
VPS52YDR484W PRM8P53174 237 aa1.11□□□□□ -2.23
VPS52YDR484W TRM12Q04235 462 aa1.11□□□□□ -2.23
VPS52YDR484W MRPS28P21771 286 aa1.1□□□□□ -2.23
VPS52YDR484W YGL010WP25338 174 aa1.1□□□□□ -2.23
VPS52YDR484W VMA6P32366 345 aaKnown RBP1.1□□□□□ -2.23
VPS52YDR484W MIC26P50087 233 aa1.1□□□□□ -2.23
VPS52YDR484W SNZ1Q03148 297 aa1.1□□□□□ -2.23
VPS52YDR484W CDC123Q05791 360 aa1.1□□□□□ -2.23
VPS52YDR484W MRPL28P36527 147 aa1.09□□□□□ -2.23
VPS52YDR484W POP4P38336 279 aa1.09□□□□□ -2.23
VPS52YDR484W YNL217WP40152 326 aa1.09□□□□□ -2.23
VPS52YDR484W BRR6P53062 197 aa1.09□□□□□ -2.23
VPS52YDR484W MZM1Q03429 123 aaPredicted RBP1.09□□□□□ -2.23
VPS52YDR484W RHO1P06780 209 aaKnown RBP1.09□□□□□ -2.24
VPS52YDR484W RPL27BP0C2H7 136 aaKnown RBP1.09□□□□□ -2.24
VPS52YDR484W PPA2P28239 310 aa1.09□□□□□ -2.24
VPS52YDR484W SRY1P36007 326 aa1.09□□□□□ -2.24
VPS52YDR484W YBR220CP38318 560 aa1.09□□□□□ -2.24
VPS52YDR484W URA8P38627 578 aaPredicted RBP1.09□□□□□ -2.24
VPS52YDR484W BOL2P53082 120 aa1.09□□□□□ -2.24
VPS52YDR484W SPG3Q04398 127 aaPredicted RBP1.09□□□□□ -2.24
VPS52YDR484W UBR2Q07963 1872 aa1.09□□□□□ -2.24
VPS52YDR484W FLO9P39712 1322 aa1.08□□□□□ -2.24
VPS52YDR484W THP2O13539 261 aaKnown RBP1.08□□□□□ -2.24
VPS52YDR484W YLR156WP0CE96 114 aa1.08□□□□□ -2.24
VPS52YDR484W YLR159WP0CE97 114 aa1.08□□□□□ -2.24
VPS52YDR484W YLR161WP0CE98 114 aa1.08□□□□□ -2.24
VPS52YDR484W FZF1P32805 299 aa1.08□□□□□ -2.24
VPS52YDR484W YET1P35723 206 aa1.08□□□□□ -2.24
VPS52YDR484W SKG1P36169 355 aa1.08□□□□□ -2.24
VPS52YDR484W FAR7P43592 221 aa1.08□□□□□ -2.24
VPS52YDR484W YDR248CQ03786 193 aa1.08□□□□□ -2.24
VPS52YDR484W YLR162WQ06235 118 aa1.08□□□□□ -2.24
VPS52YDR484W CSI2Q08054 341 aa1.08□□□□□ -2.24
VPS52YDR484W CDC28P00546 298 aaKnown RBP1.07□□□□□ -2.24
VPS52YDR484W YMR31P19955 123 aa1.07□□□□□ -2.24
VPS52YDR484W UMP1P38293 148 aa1.07□□□□□ -2.24
VPS52YDR484W MIC12P38341 106 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms