RNA–Protein interactions for RNA: YDL046W

NPC2, Transcript of Functional homolog of human NPC2/He1, yeast

Gene NPC2, Length 522 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPC2	YDL046W	PEX17	P40155	199 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	FMC1	P40491	155 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	RSM25	P40496	264 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	AGE2	P40529	298 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	MCM22	P47167	239 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	NUP84	P52891	726 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	ERV29	P53337	310 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	YNR062C	P53748	327 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	ABF2	Q02486	183 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	TRM12	Q04235	462 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	YML096W	Q04489	525 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	MED4	Q12343	284 aa		0.7	□□□□□ -2.3
NPC2	YDL046W	CDC8	P00572	216 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	MRPL25	P23369	157 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	SRB4	P32569	687 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	VPS21	P36017	210 aa	Known RBP	0.69	□□□□□ -2.3
NPC2	YDL046W	YBR219C	P38317	127 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	CUE1	P38428	203 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	IRC22	P40006	225 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	GLE2	P40066	365 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	TRM9	P49957	279 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	YNL010W	P53981	241 aa	Known RBP	0.69	□□□□□ -2.3
NPC2	YDL046W	DID2	P69771	204 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	BUD25	P85052	153 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	PET117	Q02771	107 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	RRN5	Q02983	363 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	SPG3	Q04398	127 aa	Predicted RBP	0.69	□□□□□ -2.3
NPC2	YDL046W	SML1	Q04964	104 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	YLR283W	Q05867	314 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	SSQ1	Q05931	657 aa	Predicted RBP	0.69	□□□□□ -2.3
NPC2	YDL046W	PSF1	Q12488	208 aa		0.69	□□□□□ -2.3
NPC2	YDL046W	REP2	P03872	296 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	SPT3	P06844	337 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	BCY1	P07278	416 aa	Known RBP	0.68	□□□□□ -2.3
NPC2	YDL046W	YPR170W-B	P0C5R9	85 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	MATALPHA1	P0CY06	175 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	HMLALPHA1	P0CY07	175 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	YGL010W	P25338	174 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	CDC10	P25342	322 aa	Known RBP	0.68	□□□□□ -2.3
NPC2	YDL046W	YCR016W	P25617	290 aa	Known RBP	0.68	□□□□□ -2.3
NPC2	YDL046W	YKR045C	P36138	183 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	YBR220C	P38318	560 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	ICE2	P40499	491 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	TIR3	P40552	269 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	RPL33B	P41056	107 aa	Known RBP	0.68	□□□□□ -2.3
NPC2	YDL046W	RPC17	P47076	161 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	BOL2	P53082	120 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	YLR162W	Q06235	118 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	UBR2	Q07963	1872 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	CSI2	Q08054	341 aa		0.68	□□□□□ -2.3
NPC2	YDL046W	CYR1	P08678	2026 aa	Known RBP	0.67	□□□□□ -2.3
NPC2	YDL046W	RPL27B	P0C2H7	136 aa	Known RBP	0.67	□□□□□ -2.3
NPC2	YDL046W	RPL2A	P0CX45	254 aa	Known RBP	0.67	□□□□□ -2.3
NPC2	YDL046W	RPL2B	P0CX46	254 aa	Known RBP	0.67	□□□□□ -2.3
NPC2	YDL046W	SRY1	P36007	326 aa		0.67	□□□□□ -2.3
NPC2	YDL046W	URA8	P38627	578 aa	Predicted RBP	0.67	□□□□□ -2.3
NPC2	YDL046W	PGD1	P40356	397 aa		0.67	□□□□□ -2.3
NPC2	YDL046W	YRB2	P40517	327 aa		0.67	□□□□□ -2.3
NPC2	YDL046W	LIA1	P47120	325 aa	Known RBP	0.67	□□□□□ -2.3
NPC2	YDL046W	AIF1	P52923	378 aa		0.67	□□□□□ -2.3
NPC2	YDL046W	NSA1	P53136	463 aa	Predicted RBP	0.67	□□□□□ -2.3
NPC2	YDL046W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
NPC2	YDL046W	NUP49	Q02199	472 aa		0.67	□□□□□ -2.3
NPC2	YDL046W	YMD8	Q03697	442 aa		0.67	□□□□□ -2.3
NPC2	YDL046W	LPP1	Q04396	274 aa		0.67	□□□□□ -2.3
NPC2	YDL046W	CFT1	Q06632	1357 aa	Known RBP	0.67	□□□□□ -2.3
NPC2	YDL046W	FLO9	P39712	1322 aa		0.66	□□□□□ -2.3
NPC2	YDL046W	FPR1	P20081	114 aa	Known RBP	0.66	□□□□□ -2.3
NPC2	YDL046W	ATG22	P25568	528 aa		0.66	□□□□□ -2.3
NPC2	YDL046W	FZF1	P32805	299 aa		0.66	□□□□□ -2.3
NPC2	YDL046W	MSN4	P33749	630 aa		0.66	□□□□□ -2.3
NPC2	YDL046W	UPS2	P35200	230 aa		0.66	□□□□□ -2.3
NPC2	YDL046W	DOG2	P38773	246 aa		0.66	□□□□□ -2.3
NPC2	YDL046W	DOC1	P53068	250 aa		0.66	□□□□□ -2.3
NPC2	YDL046W	MZM1	Q03429	123 aa	Predicted RBP	0.66	□□□□□ -2.3
NPC2	YDL046W	LSO2	Q3E772	92 aa	Known RBP	0.66	□□□□□ -2.3
NPC2	YDL046W	CDC28	P00546	298 aa	Known RBP	0.65	□□□□□ -2.31
NPC2	YDL046W	RHO1	P06780	209 aa	Known RBP	0.65	□□□□□ -2.31
NPC2	YDL046W	YLR156W	P0CE96	114 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	YLR159W	P0CE97	114 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	YLR161W	P0CE98	114 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	URA6	P15700	204 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	POP4	P38336	279 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	YER085C	P40058	173 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	YNL217W	P40152	326 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	RPL13B	P40212	199 aa	Known RBP	0.65	□□□□□ -2.31
NPC2	YDL046W	PRE6	P40303	254 aa	Known RBP	0.65	□□□□□ -2.31
NPC2	YDL046W	MIC26	P50087	233 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	YNR077C	P53758	84 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	FYV6	P53913	173 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	SNZ1	Q03148	297 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	YML108W	Q03759	105 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	CDC123	Q05791	360 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	RPL13A	Q12690	199 aa	Predicted RBP	0.65	□□□□□ -2.31
NPC2	YDL046W	DRS2	P39524	1355 aa		0.65	□□□□□ -2.31
NPC2	YDL046W	THP2	O13539	261 aa	Known RBP	0.64	□□□□□ -2.31
NPC2	YDL046W	YMR31	P19955	123 aa		0.64	□□□□□ -2.31
NPC2	YDL046W	MRPS28	P21771	286 aa		0.64	□□□□□ -2.31
NPC2	YDL046W	DBF2	P22204	572 aa		0.64	□□□□□ -2.31
NPC2	YDL046W	VMA6	P32366	345 aa	Known RBP	0.64	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms