RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C NDE2Q07500 545 aa3.23□□□□□ -1.89
PXR1YGR280C RRT8Q08219 342 aa3.23□□□□□ -1.89
PXR1YGR280C PHO91P27514 894 aa3.22□□□□□ -1.89
PXR1YGR280C AFG1P32317 509 aa3.22□□□□□ -1.89
PXR1YGR280C SWD2P36104 329 aaPredicted RBP3.22□□□□□ -1.89
PXR1YGR280C ECM1P39715 212 aa3.22□□□□□ -1.89
PXR1YGR280C YFL015CP43578 164 aa3.22□□□□□ -1.89
PXR1YGR280C RET2P43621 546 aa3.22□□□□□ -1.89
PXR1YGR280C YJL163CP46996 555 aa3.22□□□□□ -1.89
PXR1YGR280C URB2P47108 1174 aa3.22□□□□□ -1.89
PXR1YGR280C RRN9P53437 365 aa3.22□□□□□ -1.89
PXR1YGR280C YKR005CQ02203 525 aa3.22□□□□□ -1.89
PXR1YGR280C ARP10Q04549 284 aa3.22□□□□□ -1.89
PXR1YGR280C GRC3Q07845 632 aa3.22□□□□□ -1.89
PXR1YGR280C IZH3Q07959 543 aa3.22□□□□□ -1.89
PXR1YGR280C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
PXR1YGR280C RIB3Q99258 208 aa3.22□□□□□ -1.89
PXR1YGR280C ASF2P32448 525 aaPredicted RBP3.21□□□□□ -1.9
PXR1YGR280C SSZ1P38788 538 aaKnown RBP3.21□□□□□ -1.9
PXR1YGR280C PHM8P40025 321 aa3.21□□□□□ -1.9
PXR1YGR280C RTS2P40962 232 aa3.21□□□□□ -1.9
PXR1YGR280C ATG18P43601 500 aa3.21□□□□□ -1.9
PXR1YGR280C EFM3P47163 339 aa3.21□□□□□ -1.9
PXR1YGR280C RAD33Q04231 177 aa3.21□□□□□ -1.9
PXR1YGR280C ATG26Q06321 1198 aa3.21□□□□□ -1.9
PXR1YGR280C MCM21Q06675 368 aa3.21□□□□□ -1.9
PXR1YGR280C SPC3Q12133 184 aa3.21□□□□□ -1.9
PXR1YGR280C YLR126CQ12288 251 aa3.21□□□□□ -1.9
PXR1YGR280C YDL007C-AQ2V2Q0 85 aa3.21□□□□□ -1.9
PXR1YGR280C THP2O13539 261 aaKnown RBP3.2□□□□□ -1.9
PXR1YGR280C TPK3P05986 398 aa3.2□□□□□ -1.9
PXR1YGR280C RPC40P07703 335 aaKnown RBP3.2□□□□□ -1.9
PXR1YGR280C STF2P16965 84 aa3.2□□□□□ -1.9
PXR1YGR280C SSH1P38353 490 aaKnown RBP3.2□□□□□ -1.9
PXR1YGR280C ALP1P38971 573 aa3.2□□□□□ -1.9
PXR1YGR280C PUG1P40100 303 aa3.2□□□□□ -1.9
PXR1YGR280C TDA10P42938 290 aa3.2□□□□□ -1.9
PXR1YGR280C YFL067WP43537 175 aa3.2□□□□□ -1.9
PXR1YGR280C SAM50P53969 484 aa3.2□□□□□ -1.9
PXR1YGR280C STD1Q02794 444 aa3.2□□□□□ -1.9
PXR1YGR280C YDR179W-AQ03983 463 aa3.2□□□□□ -1.9
PXR1YGR280C RRP9Q06506 573 aaKnown RBP3.2□□□□□ -1.9
PXR1YGR280C SIA1Q12212 622 aa3.2□□□□□ -1.9
PXR1YGR280C EAF3Q12432 401 aa3.2□□□□□ -1.9
PXR1YGR280C REP2P03872 296 aa3.19□□□□□ -1.9
PXR1YGR280C MSS18P08593 268 aa3.19□□□□□ -1.9
PXR1YGR280C SNF4P12904 322 aa3.19□□□□□ -1.9
PXR1YGR280C DPB3P27344 201 aa3.19□□□□□ -1.9
PXR1YGR280C PDC2P32896 925 aa3.19□□□□□ -1.9
PXR1YGR280C PHD1P36093 366 aa3.19□□□□□ -1.9
PXR1YGR280C MTW1P39731 289 aa3.19□□□□□ -1.9
PXR1YGR280C PAC2P39937 518 aa3.19□□□□□ -1.9
PXR1YGR280C IMD3P50095 523 aaKnown RBP3.19□□□□□ -1.9
PXR1YGR280C YGL262WP53054 175 aa3.19□□□□□ -1.9
PXR1YGR280C MRM2P53123 320 aa3.19□□□□□ -1.9
PXR1YGR280C YGL101WP53144 215 aa3.19□□□□□ -1.9
PXR1YGR280C NRK1P53915 240 aa3.19□□□□□ -1.9
PXR1YGR280C HHT1P61830 136 aa3.19□□□□□ -1.9
PXR1YGR280C COX12Q01519 83 aa3.19□□□□□ -1.9
PXR1YGR280C TIM44Q01852 431 aa3.19□□□□□ -1.9
PXR1YGR280C YMR102CQ03177 834 aa3.19□□□□□ -1.9
PXR1YGR280C YMR181CQ03231 154 aa3.19□□□□□ -1.9
PXR1YGR280C HFD1Q04458 532 aa3.19□□□□□ -1.9
PXR1YGR280C VAM3Q12241 283 aa3.19□□□□□ -1.9
PXR1YGR280C RPL25P04456 142 aaKnown RBP3.18□□□□□ -1.9
PXR1YGR280C ATG22P25568 528 aa3.18□□□□□ -1.9
PXR1YGR280C ILV6P25605 309 aaKnown RBP3.18□□□□□ -1.9
PXR1YGR280C IMP1P28627 190 aa3.18□□□□□ -1.9
PXR1YGR280C ERG2P32352 222 aa3.18□□□□□ -1.9
PXR1YGR280C MRP20P32387 263 aa3.18□□□□□ -1.9
PXR1YGR280C PRP21P32524 280 aaPredicted RBP3.18□□□□□ -1.9
PXR1YGR280C SIP2P34164 415 aaKnown RBP3.18□□□□□ -1.9
PXR1YGR280C FRM2P37261 193 aa3.18□□□□□ -1.9
PXR1YGR280C FZO1P38297 855 aa3.18□□□□□ -1.9
PXR1YGR280C RPS20P38701 121 aaKnown RBP3.18□□□□□ -1.9
PXR1YGR280C YGR168CP53293 376 aa3.18□□□□□ -1.9
PXR1YGR280C MAL13P53338 473 aa3.18□□□□□ -1.9
PXR1YGR280C HAL1Q01766 294 aa3.18□□□□□ -1.9
PXR1YGR280C FSH2Q05015 223 aa3.18□□□□□ -1.9
PXR1YGR280C MRX8Q05473 314 aa3.18□□□□□ -1.9
PXR1YGR280C YPR195CQ06594 109 aa3.18□□□□□ -1.9
PXR1YGR280C MCH1Q07376 486 aa3.18□□□□□ -1.9
PXR1YGR280C YDL199CQ12407 687 aa3.18□□□□□ -1.9
PXR1YGR280C ISA2Q12425 185 aa3.18□□□□□ -1.9
PXR1YGR280C IDH1P28834 360 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
PXR1YGR280C YEL043WP32618 956 aa3.17□□□□□ -1.9
PXR1YGR280C RFC3P38629 340 aa3.17□□□□□ -1.9
PXR1YGR280C CIN4P39110 191 aa3.17□□□□□ -1.9
PXR1YGR280C YER137CP40083 148 aaKnown RBP3.17□□□□□ -1.9
PXR1YGR280C RPR2P40571 144 aa3.17□□□□□ -1.9
PXR1YGR280C STB1P42845 420 aa3.17□□□□□ -1.9
PXR1YGR280C UBC11P52492 156 aa3.17□□□□□ -1.9
PXR1YGR280C LGE1Q02796 332 aaKnown RBP3.17□□□□□ -1.9
PXR1YGR280C RBS1Q05672 457 aaKnown RBP3.17□□□□□ -1.9
PXR1YGR280C YKL068W-AQ3E826 78 aa3.17□□□□□ -1.9
PXR1YGR280C AAC1P04710 309 aa3.16□□□□□ -1.9
PXR1YGR280C DPM1P14020 267 aaKnown RBP3.16□□□□□ -1.9
PXR1YGR280C NDC1P32500 655 aa3.16□□□□□ -1.9
PXR1YGR280C ECM4P36156 370 aa3.16□□□□□ -1.9
PXR1YGR280C RTC2P38279 296 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms