RNA–Protein interactions for RNA: YJR041C

URB2, Protein required for normal metabolism of the rRNA primary transcript, yeast

Gene URB2, Length 3,525 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URB2	YJR041C	YGL034C	P53186	121 aa		2.29	□□□□□ -2.04
URB2	YJR041C	TPI1	P00942	248 aa	Known RBP	2.29	□□□□□ -2.04
URB2	YJR041C	PRE6	P40303	254 aa	Known RBP	2.29	□□□□□ -2.04
URB2	YJR041C	YFL064C	P43540	174 aa		2.29	□□□□□ -2.04
URB2	YJR041C	FUS2	Q05670	677 aa		2.29	□□□□□ -2.04
URB2	YJR041C	CMC2	Q3E7A4	109 aa		2.29	□□□□□ -2.04
URB2	YJR041C	THO2	P53552	1597 aa	Known RBP	2.28	□□□□□ -2.04
URB2	YJR041C	COX4	P04037	155 aa		2.28	□□□□□ -2.04
URB2	YJR041C	GPI18	P38211	433 aa		2.28	□□□□□ -2.04
URB2	YJR041C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.28	□□□□□ -2.04	not detected
URB2	YJR041C	SEC72	P39742	193 aa	Known RBP	2.28	□□□□□ -2.04
URB2	YJR041C	YIL001W	P40560	513 aa		2.28	□□□□□ -2.04
URB2	YJR041C	CPR7	P47103	393 aa		2.28	□□□□□ -2.04
URB2	YJR041C	CAX4	P53223	239 aa		2.28	□□□□□ -2.04
URB2	YJR041C	MRPS16	Q02608	121 aa		2.28	□□□□□ -2.04
URB2	YJR041C	VHS1	Q03785	461 aa		2.28	□□□□□ -2.04
URB2	YJR041C	SEI1	Q06058	285 aa		2.28	□□□□□ -2.04
URB2	YJR041C	MSA1	Q08471	629 aa		2.28	□□□□□ -2.04
URB2	YJR041C	YPL150W	Q12152	901 aa		2.28	□□□□□ -2.04
URB2	YJR041C	YBL008W-A	Q3E821	79 aa		2.28	□□□□□ -2.04
URB2	YJR041C	OAC1	P32332	324 aa		2.28	□□□□□ -2.04
URB2	YJR041C	YGL262W	P53054	175 aa		2.28	□□□□□ -2.04
URB2	YJR041C	DIA1	P54005	336 aa		2.28	□□□□□ -2.04
URB2	YJR041C	YPL039W	Q03080	316 aa		2.28	□□□□□ -2.04
URB2	YJR041C	GIM5	Q04493	163 aa		2.28	□□□□□ -2.04
URB2	YJR041C	WTM1	Q12363	437 aa	Known RBP	2.28	□□□□□ -2.04
URB2	YJR041C	URA6	P15700	204 aa		2.28	□□□□□ -2.05
URB2	YJR041C	HMT1	P38074	348 aa		2.28	□□□□□ -2.05
URB2	YJR041C	RRG9	P40156	214 aa		2.28	□□□□□ -2.05
URB2	YJR041C	YGL159W	P53110	370 aa		2.28	□□□□□ -2.05
URB2	YJR041C	PRM15	Q03262	622 aa		2.28	□□□□□ -2.05
URB2	YJR041C	GOT1	Q03554	138 aa		2.28	□□□□□ -2.05
URB2	YJR041C	CDC28	P00546	298 aa	Known RBP	2.27	□□□□□ -2.05
URB2	YJR041C	BCY1	P07278	416 aa	Known RBP	2.27	□□□□□ -2.05
URB2	YJR041C	FBA1	P14540	359 aa	Known RBP	2.27	□□□□□ -2.05
URB2	YJR041C	TIP20	P33891	701 aa		2.27	□□□□□ -2.05
URB2	YJR041C	YKL075C	P36083	450 aa		2.27	□□□□□ -2.05
URB2	YJR041C	EDC2	P40023	145 aa	Predicted RBP	2.27	□□□□□ -2.05
URB2	YJR041C	TOS8	P53147	276 aa		2.27	□□□□□ -2.05
URB2	YJR041C	FYV6	P53913	173 aa		2.27	□□□□□ -2.05
URB2	YJR041C	DXO1	Q06349	442 aa		2.27	□□□□□ -2.05
URB2	YJR041C	MCH1	Q07376	486 aa		2.27	□□□□□ -2.05
URB2	YJR041C	AVT6	P40074	448 aa		2.27	□□□□□ -2.05
URB2	YJR041C	RPE1	P46969	238 aa		2.27	□□□□□ -2.05
URB2	YJR041C	SLX9	P53251	210 aa	Predicted RBP	2.27	□□□□□ -2.05
URB2	YJR041C	GTR2	P53290	341 aa		2.27	□□□□□ -2.05
URB2	YJR041C	TRM10	Q12400	293 aa		2.27	□□□□□ -2.05
URB2	YJR041C	PSK1	P31374	1356 aa		2.27	□□□□□ -2.05
URB2	YJR041C	FKS1	P38631	1876 aa	Known RBP	2.27	□□□□□ -2.05
URB2	YJR041C	ATP7	P30902	174 aa		2.26	□□□□□ -2.05
URB2	YJR041C	SRY1	P36007	326 aa		2.26	□□□□□ -2.05
URB2	YJR041C	EFM1	P38732	585 aa		2.26	□□□□□ -2.05
URB2	YJR041C	FRT2	P39734	528 aa		2.26	□□□□□ -2.05
URB2	YJR041C	IMP4	P53941	290 aa	Known RBP	2.26	□□□□□ -2.05
URB2	YJR041C	YOL019W	Q08157	551 aa		2.26	□□□□□ -2.05
URB2	YJR041C	DFM1	Q12743	341 aa	Known RBP	2.26	□□□□□ -2.05
URB2	YJR041C	PCL1	P24867	279 aa		2.26	□□□□□ -2.05
URB2	YJR041C	ERG10	P41338	398 aa	Known RBP	2.26	□□□□□ -2.05
URB2	YJR041C	TPO4	Q12256	659 aa		2.26	□□□□□ -2.05
URB2	YJR041C	SNA3	P14359	133 aa		2.26	□□□□□ -2.05
URB2	YJR041C	SNF6	P18888	332 aa		2.26	□□□□□ -2.05
URB2	YJR041C	RPB9	P27999	122 aa		2.26	□□□□□ -2.05
URB2	YJR041C	ERG2	P32352	222 aa		2.26	□□□□□ -2.05
URB2	YJR041C	EMI1	Q04406	187 aa		2.26	□□□□□ -2.05
URB2	YJR041C	YOL163W	P0CF20	169 aa		2.25	□□□□□ -2.05
URB2	YJR041C	DBP7	P36120	742 aa	Known RBP	2.25	□□□□□ -2.05
URB2	YJR041C	YPI1	P43587	155 aa		2.25	□□□□□ -2.05
URB2	YJR041C	MMS2	P53152	137 aa		2.25	□□□□□ -2.05
URB2	YJR041C	YIP3	P53633	176 aa		2.25	□□□□□ -2.05
URB2	YJR041C	MRX4	Q12467	430 aa		2.25	□□□□□ -2.05
URB2	YJR041C	DRE2	P36152	348 aa		2.25	□□□□□ -2.05
URB2	YJR041C	MRPL27	P36526	146 aa	Predicted RBP	2.25	□□□□□ -2.05
URB2	YJR041C	SHE3	P38272	425 aa	Known RBP	2.25	□□□□□ -2.05
URB2	YJR041C	YNL046W	P53956	172 aa		2.25	□□□□□ -2.05
URB2	YJR041C	ECM19	Q06011	112 aa		2.25	□□□□□ -2.05
URB2	YJR041C	YDL211C	Q12121	372 aa		2.25	□□□□□ -2.05
URB2	YJR041C	TIR4	Q12218	487 aa	Predicted RBP	2.25	□□□□□ -2.05
URB2	YJR041C	YHR139C-A	O13536	103 aa		2.25	□□□□□ -2.05
URB2	YJR041C	COX10	P21592	462 aa		2.25	□□□□□ -2.05
URB2	YJR041C	YJL028W	P47062	111 aa		2.25	□□□□□ -2.05
URB2	YJR041C	YJR149W	P47177	404 aa		2.25	□□□□□ -2.05
URB2	YJR041C	AAH1	P53909	347 aa		2.25	□□□□□ -2.05
URB2	YJR041C	NNT1	Q05874	261 aa		2.25	□□□□□ -2.05
URB2	YJR041C	TMC1	Q08422	150 aa	Predicted RBP	2.25	□□□□□ -2.05
URB2	YJR041C	YPS3	Q12303	508 aa		2.25	□□□□□ -2.05
URB2	YJR041C	YPL229W	Q99395	206 aa		2.25	□□□□□ -2.05
URB2	YJR041C	CCH1	P50077	2039 aa		2.25	□□□□□ -2.05
URB2	YJR041C	REV3	P14284	1504 aa		2.24	□□□□□ -2.05
URB2	YJR041C	ISY1	P21374	235 aa	Predicted RBP	2.24	□□□□□ -2.05
URB2	YJR041C	ECM34	P38728	170 aa		2.24	□□□□□ -2.05
URB2	YJR041C	BXI1	P48558	297 aa		2.24	□□□□□ -2.05
URB2	YJR041C	YML096W	Q04489	525 aa		2.24	□□□□□ -2.05
URB2	YJR041C	SRP14	P38985	146 aa		2.24	□□□□□ -2.05
URB2	YJR041C	MEP2	P41948	499 aa		2.24	□□□□□ -2.05
URB2	YJR041C	YOR186W	Q08560	144 aa		2.24	□□□□□ -2.05
URB2	YJR041C	YHR214C-E	Q8TGK0	99 aa		2.24	□□□□□ -2.05
URB2	YJR041C	TCB3	Q03640	1545 aa	Known RBP	2.24	□□□□□ -2.05
URB2	YJR041C	NUP157	P40064	1391 aa	Known RBP	2.24	□□□□□ -2.05
URB2	YJR041C	COS2	P0CX12	379 aa		2.24	□□□□□ -2.05
URB2	YJR041C	COS3	P0CX13	379 aa		2.24	□□□□□ -2.05

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