RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C TDH1P00360 332 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C RPS31P05759 152 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C UBI4P0CG63 381 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C RPL40AP0CH08 128 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C RPL40BP0CH09 128 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C PET18P25362 215 aa6.69□□□□□ -1.34
RUP1YOR138C SLC1P33333 303 aa6.69□□□□□ -1.34
RUP1YOR138C YKL097CP34245 136 aa6.69□□□□□ -1.34
RUP1YOR138C YKL162CP36052 402 aa6.69□□□□□ -1.34
RUP1YOR138C IKI1P38874 309 aa6.69□□□□□ -1.34
RUP1YOR138C TIF34P40217 347 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C YIL024CP40543 189 aa6.69□□□□□ -1.34
RUP1YOR138C PNC1P53184 216 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C YLR152CP54072 576 aa6.69□□□□□ -1.34
RUP1YOR138C YML018CQ03730 393 aa6.69□□□□□ -1.34
RUP1YOR138C MRPL51Q06090 140 aaPredicted RBP6.69□□□□□ -1.34
RUP1YOR138C GIC2Q06648 383 aa6.69□□□□□ -1.34
RUP1YOR138C IRC13Q08630 104 aa6.69□□□□□ -1.34
RUP1YOR138C SCP1Q08873 200 aa6.69□□□□□ -1.34
RUP1YOR138C YLR146W-AQ2V2P1 62 aa6.69□□□□□ -1.34
RUP1YOR138C LSO2Q3E772 92 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C PET20Q99373 253 aa6.69□□□□□ -1.34
RUP1YOR138C MATALPHA1P0CY06 175 aa6.68□□□□□ -1.34
RUP1YOR138C HMLALPHA1P0CY07 175 aa6.68□□□□□ -1.34
RUP1YOR138C SED4P25365 1065 aa6.68□□□□□ -1.34
RUP1YOR138C KRR1P25586 316 aaPredicted RBP6.68□□□□□ -1.34
RUP1YOR138C YBL010CP32788 280 aa6.68□□□□□ -1.34
RUP1YOR138C SNC2P33328 115 aa6.68□□□□□ -1.34
RUP1YOR138C DLS1P40366 167 aa6.68□□□□□ -1.34
RUP1YOR138C MRX5P47007 382 aa6.68□□□□□ -1.34
RUP1YOR138C PMT3P47190 753 aa6.68□□□□□ -1.34
RUP1YOR138C MTM1P53320 366 aa6.68□□□□□ -1.34
RUP1YOR138C SCW4P53334 386 aaKnown RBP6.68□□□□□ -1.34
RUP1YOR138C HHO1P53551 258 aa6.68□□□□□ -1.34
RUP1YOR138C NCE101Q02820 53 aa6.68□□□□□ -1.34
RUP1YOR138C YPR174CQ06616 221 aaPredicted RBP6.68□□□□□ -1.34
RUP1YOR138C AVO1Q08236 1176 aa6.68□□□□□ -1.34
RUP1YOR138C RPL1AP0CX43 217 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C RPL1BP0CX44 217 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C NAM2P11325 894 aa6.67□□□□□ -1.34
RUP1YOR138C MSK1P32048 576 aa6.67□□□□□ -1.34
RUP1YOR138C TRS65P32893 560 aa6.67□□□□□ -1.34
RUP1YOR138C RPS0AP32905 252 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C SRP102P36057 244 aaPredicted RBP6.67□□□□□ -1.34
RUP1YOR138C YHR180WP38868 163 aa6.67□□□□□ -1.34
RUP1YOR138C PGD1P40356 397 aa6.67□□□□□ -1.34
RUP1YOR138C YIL067CP40514 678 aa6.67□□□□□ -1.34
RUP1YOR138C ACT1P60010 375 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C EKI1Q03764 534 aa6.67□□□□□ -1.34
RUP1YOR138C YDR248CQ03786 193 aa6.67□□□□□ -1.34
RUP1YOR138C RVB1Q03940 463 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C LRS4Q04087 347 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C HNT1Q04344 158 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C COQ10Q08058 207 aa6.67□□□□□ -1.34
RUP1YOR138C ERP4Q12450 207 aa6.67□□□□□ -1.34
RUP1YOR138C CCH1P50077 2039 aa6.67□□□□□ -1.34
RUP1YOR138C HIS5P07172 385 aa6.67□□□□□ -1.34
RUP1YOR138C MXR2P25566 168 aa6.67□□□□□ -1.34
RUP1YOR138C FMT1P32785 401 aa6.67□□□□□ -1.34
RUP1YOR138C PAC1P39946 494 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C AGX1P43567 385 aa6.67□□□□□ -1.34
RUP1YOR138C YJR141WP47172 347 aaPredicted RBP6.67□□□□□ -1.34
RUP1YOR138C NIS1P53939 407 aa6.67□□□□□ -1.34
RUP1YOR138C EGD1Q02642 157 aaKnown RBP6.67□□□□□ -1.34
RUP1YOR138C PET191Q02772 108 aa6.67□□□□□ -1.34
RUP1YOR138C CAB5Q03941 241 aa6.67□□□□□ -1.34
RUP1YOR138C ENB1Q08299 606 aa6.67□□□□□ -1.34
RUP1YOR138C SRO7Q12038 1033 aa6.67□□□□□ -1.34
RUP1YOR138C YDR262WQ12331 272 aa6.67□□□□□ -1.34
RUP1YOR138C OPI3P05375 206 aa6.66□□□□□ -1.34
RUP1YOR138C DAT1P13483 248 aaKnown RBP6.66□□□□□ -1.34
RUP1YOR138C BET2P20133 325 aa6.66□□□□□ -1.34
RUP1YOR138C PPA2P28239 310 aa6.66□□□□□ -1.34
RUP1YOR138C IDP2P41939 412 aa6.66□□□□□ -1.34
RUP1YOR138C QRI1P43123 477 aaKnown RBP6.66□□□□□ -1.34
RUP1YOR138C YFR054CP43622 192 aa6.66□□□□□ -1.34
RUP1YOR138C MNN10P50108 393 aaKnown RBP6.66□□□□□ -1.34
RUP1YOR138C NIF3P53081 288 aa6.66□□□□□ -1.34
RUP1YOR138C MPP6P53725 186 aaPredicted RBP6.66□□□□□ -1.34
RUP1YOR138C BNA7Q04066 261 aa6.66□□□□□ -1.34
RUP1YOR138C MEK1P24719 497 aaPredicted RBP6.66□□□□□ -1.34
RUP1YOR138C MSN4P33749 630 aa6.66□□□□□ -1.34
RUP1YOR138C GTT1P40582 234 aa6.66□□□□□ -1.34
RUP1YOR138C PKP2P53170 491 aa6.66□□□□□ -1.34
RUP1YOR138C YNR014WP53719 212 aa6.66□□□□□ -1.34
RUP1YOR138C EST3Q03096 181 aa6.66□□□□□ -1.34
RUP1YOR138C YFT2Q06676 274 aa6.66□□□□□ -1.34
RUP1YOR138C RLM1Q12224 676 aa6.66□□□□□ -1.34
RUP1YOR138C TAO3P40468 2376 aa6.65□□□□□ -1.34
RUP1YOR138C CTA1P15202 515 aa6.65□□□□□ -1.35
RUP1YOR138C FRS1P15624 595 aaKnown RBP6.65□□□□□ -1.35
RUP1YOR138C IFM1P25038 676 aa6.65□□□□□ -1.35
RUP1YOR138C CPR4P25334 318 aa6.65□□□□□ -1.35
RUP1YOR138C VMA5P31412 392 aaKnown RBP6.65□□□□□ -1.35
RUP1YOR138C MCM10P32354 571 aa6.65□□□□□ -1.35
RUP1YOR138C SIP1P32578 815 aa6.65□□□□□ -1.35
RUP1YOR138C SPT23P35210 1082 aa6.65□□□□□ -1.35
RUP1YOR138C UMP1P38293 148 aa6.65□□□□□ -1.35
RUP1YOR138C ELO1P39540 310 aa6.65□□□□□ -1.35
RUP1YOR138C ACS2P52910 683 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms