RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C MSS11Q03825 758 aa9.97□□□□□ -0.81
YKR040CYKR040C TGS1Q12052 315 aa9.97□□□□□ -0.81
YKR040CYKR040C FSH3Q99369 266 aa9.97□□□□□ -0.81
YKR040CYKR040C MRP1P10662 321 aaKnown RBP9.96□□□□□ -0.82
YKR040CYKR040C RPL30P14120 105 aaKnown RBP9.96□□□□□ -0.82
YKR040CYKR040C HNM1P19807 563 aa9.96□□□□□ -0.82
YKR040CYKR040C AHC2P25649 128 aa9.96□□□□□ -0.82
YKR040CYKR040C SHM2P37291 469 aaKnown RBP9.96□□□□□ -0.82
YKR040CYKR040C SDS24P38314 527 aa9.96□□□□□ -0.82
YKR040CYKR040C HLR1Q04429 423 aa9.96□□□□□ -0.82
YKR040CYKR040C TY1A-NL1Q12391 440 aaKnown RBP9.96□□□□□ -0.82
YKR040CYKR040C NKP1Q12493 238 aa9.96□□□□□ -0.82
YKR040CYKR040C PRE7P23724 241 aaKnown RBP9.95□□□□□ -0.82
YKR040CYKR040C DOA4P32571 926 aa9.95□□□□□ -0.82
YKR040CYKR040C DDI1P40087 428 aa9.95□□□□□ -0.82
YKR040CYKR040C EFM3P47163 339 aa9.95□□□□□ -0.82
YKR040CYKR040C LYS20P48570 428 aaKnown RBP9.95□□□□□ -0.82
YKR040CYKR040C TYW3P53177 273 aa9.95□□□□□ -0.82
YKR040CYKR040C YDC1Q02896 317 aa9.95□□□□□ -0.82
YKR040CYKR040C PRP3Q03338 469 aaPredicted RBP9.95□□□□□ -0.82
YKR040CYKR040C ATG17Q06410 417 aa9.95□□□□□ -0.82
YKR040CYKR040C LYS21Q12122 440 aaKnown RBP9.95□□□□□ -0.82
YKR040CYKR040C MTH1P35198 433 aa9.94□□□□□ -0.82
YKR040CYKR040C RCN1P36054 211 aa9.94□□□□□ -0.82
YKR040CYKR040C TCM62P38228 572 aaKnown RBP9.94□□□□□ -0.82
YKR040CYKR040C ARC40P38328 384 aaKnown RBP9.94□□□□□ -0.82
YKR040CYKR040C SSH1P38353 490 aaKnown RBP9.94□□□□□ -0.82
YKR040CYKR040C CIN2P46670 268 aa9.94□□□□□ -0.82
YKR040CYKR040C PEF1P53238 335 aa9.94□□□□□ -0.82
YKR040CYKR040C YNL046WP53956 172 aa9.94□□□□□ -0.82
YKR040CYKR040C DLT1Q04216 342 aa9.94□□□□□ -0.82
YKR040CYKR040C NMA1Q06178 401 aaKnown RBP9.94□□□□□ -0.82
YKR040CYKR040C YLR099W-AQ3E798 87 aa9.94□□□□□ -0.82
YKR040CYKR040C YBL113CQ7M4S9 792 aa9.94□□□□□ -0.82
YKR040CYKR040C YML003WP0CF16 290 aa9.93□□□□□ -0.82
YKR040CYKR040C ARO7P32178 256 aa9.93□□□□□ -0.82
YKR040CYKR040C REC114P32841 428 aa9.93□□□□□ -0.82
YKR040CYKR040C YCK3P39962 524 aa9.93□□□□□ -0.82
YKR040CYKR040C ERJ5P43613 295 aaPredicted RBP9.93□□□□□ -0.82
YKR040CYKR040C YAE1P47118 141 aaPredicted RBP9.93□□□□□ -0.82
YKR040CYKR040C YJR120WP47157 116 aa9.93□□□□□ -0.82
YKR040CYKR040C RBL2P48606 106 aaKnown RBP9.93□□□□□ -0.82
YKR040CYKR040C PHB2P50085 310 aa9.93□□□□□ -0.82
YKR040CYKR040C YGL159WP53110 370 aa9.93□□□□□ -0.82
YKR040CYKR040C SPO19Q03029 223 aa9.93□□□□□ -0.82
YKR040CYKR040C YPR098CQ06089 161 aa9.93□□□□□ -0.82
YKR040CYKR040C PEX30Q06169 523 aa9.93□□□□□ -0.82
YKR040CYKR040C YEL009C-AA0A023PZF2 135 aa9.92□□□□□ -0.82
YKR040CYKR040C CDC31P06704 161 aaKnown RBP9.92□□□□□ -0.82
YKR040CYKR040C MKS1P34072 584 aa9.92□□□□□ -0.82
YKR040CYKR040C YIR020CP40575 100 aa9.92□□□□□ -0.82
YKR040CYKR040C NCA3P46955 337 aa9.92□□□□□ -0.82
YKR040CYKR040C PMT5P52867 743 aa9.92□□□□□ -0.82
YKR040CYKR040C YIP4P53093 235 aa9.92□□□□□ -0.82
YKR040CYKR040C POP6P53218 158 aa9.92□□□□□ -0.82
YKR040CYKR040C GMC1Q04399 608 aa9.92□□□□□ -0.82
YKR040CYKR040C ASR1Q06834 288 aa9.92□□□□□ -0.82
YKR040CYKR040C SSK1Q07084 712 aa9.92□□□□□ -0.82
YKR040CYKR040C RFU1Q08003 200 aa9.92□□□□□ -0.82
YKR040CYKR040C RTR2Q12378 196 aa9.92□□□□□ -0.82
YKR040CYKR040C AFG1P32317 509 aa9.91□□□□□ -0.82
YKR040CYKR040C PAU2P32612 120 aa9.91□□□□□ -0.82
YKR040CYKR040C PPZ2P33329 710 aa9.91□□□□□ -0.82
YKR040CYKR040C SFK1P35735 353 aa9.91□□□□□ -0.82
YKR040CYKR040C GLR1P41921 483 aaKnown RBP9.91□□□□□ -0.82
YKR040CYKR040C AVT4P50944 713 aa9.91□□□□□ -0.82
YKR040CYKR040C SCW11P53189 542 aa9.91□□□□□ -0.82
YKR040CYKR040C YKR005CQ02203 525 aa9.91□□□□□ -0.82
YKR040CYKR040C YLR108CQ12259 485 aa9.91□□□□□ -0.82
YKR040CYKR040C SIR2P06700 562 aa9.9□□□□□ -0.82
YKR040CYKR040C SGA1P08019 549 aa9.9□□□□□ -0.82
YKR040CYKR040C MATALPHA1P0CY06 175 aa9.9□□□□□ -0.82
YKR040CYKR040C HMLALPHA1P0CY07 175 aa9.9□□□□□ -0.82
YKR040CYKR040C RPS5P26783 225 aaKnown RBP9.9□□□□□ -0.82
YKR040CYKR040C RNH201P53942 307 aa9.9□□□□□ -0.82
YKR040CYKR040C GRX3Q03835 250 aa9.9□□□□□ -0.82
YKR040CYKR040C REP1P03871 373 aa9.89□□□□□ -0.83
YKR040CYKR040C RPL39P04650 51 aa9.89□□□□□ -0.83
YKR040CYKR040C ADK1P07170 222 aaKnown RBP9.89□□□□□ -0.83
YKR040CYKR040C SAG1P20840 650 aa9.89□□□□□ -0.83
YKR040CYKR040C PCL6P40038 420 aa9.89□□□□□ -0.83
YKR040CYKR040C RIO2P40160 425 aaKnown RBP9.89□□□□□ -0.83
YKR040CYKR040C YDR179W-AQ03983 463 aa9.89□□□□□ -0.83
YKR040CYKR040C HEM25Q07534 307 aa9.89□□□□□ -0.83
YKR040CYKR040C SNA4Q07549 140 aa9.89□□□□□ -0.83
YKR040CYKR040C ERP4Q12450 207 aa9.89□□□□□ -0.83
YKR040CYKR040C GCN4P03069 281 aa9.88□□□□□ -0.83
YKR040CYKR040C SNC2P33328 115 aa9.88□□□□□ -0.83
YKR040CYKR040C IMO32P53219 342 aa9.88□□□□□ -0.83
YKR040CYKR040C YDR248CQ03786 193 aa9.88□□□□□ -0.83
YKR040CYKR040C SPR28Q04921 423 aa9.88□□□□□ -0.83
YKR040CYKR040C GPN3Q06543 272 aa9.88□□□□□ -0.83
YKR040CYKR040C ORT1Q12375 292 aa9.88□□□□□ -0.83
YKR040CYKR040C UTP20P35194 2493 aaKnown RBP9.88□□□□□ -0.83
YKR040CYKR040C QCR7P00128 127 aa9.87□□□□□ -0.83
YKR040CYKR040C RPL24BP24000 155 aaKnown RBP9.87□□□□□ -0.83
YKR040CYKR040C ERG24P32462 438 aaKnown RBP9.87□□□□□ -0.83
YKR040CYKR040C ZRT3P34240 503 aa9.87□□□□□ -0.83
YKR040CYKR040C SHE2P36068 246 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
YKR040CYKR040C CTR2P38865 189 aa9.87□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 138.6 ms