RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W POP8P38208 133 aa2.91□□□□□ -1.94
CTM1YHR109W GPI18P38211 433 aa2.91□□□□□ -1.94
CTM1YHR109W SHE3P38272 425 aaKnown RBP2.91□□□□□ -1.94
CTM1YHR109W CUE1P38428 203 aa2.91□□□□□ -1.94
CTM1YHR109W GOS1P38736 223 aa2.91□□□□□ -1.94
CTM1YHR109W RRT13P40042 185 aa2.91□□□□□ -1.94
CTM1YHR109W PRP24P49960 444 aaKnown RBP2.91□□□□□ -1.94
CTM1YHR109W VHS1Q03785 461 aa2.91□□□□□ -1.94
CTM1YHR109W PAL1Q05518 499 aaKnown RBP2.91□□□□□ -1.94
CTM1YHR109W RFM1Q12192 310 aa2.91□□□□□ -1.94
CTM1YHR109W SIR4P11978 1358 aa2.9□□□□□ -1.94
CTM1YHR109W ISY1P21374 235 aaPredicted RBP2.9□□□□□ -1.94
CTM1YHR109W NTF2P33331 125 aaKnown RBP2.9□□□□□ -1.94
CTM1YHR109W SGE1P33335 543 aa2.9□□□□□ -1.94
CTM1YHR109W TIP20P33891 701 aa2.9□□□□□ -1.94
CTM1YHR109W EFM1P38732 585 aa2.9□□□□□ -1.94
CTM1YHR109W COX15P40086 486 aa2.9□□□□□ -1.94
CTM1YHR109W RRG9P40156 214 aa2.9□□□□□ -1.94
CTM1YHR109W YRB2P40517 327 aa2.9□□□□□ -1.94
CTM1YHR109W YFL064CP43540 174 aa2.9□□□□□ -1.94
CTM1YHR109W TRM9P49957 279 aa2.9□□□□□ -1.94
CTM1YHR109W CDC123Q05791 360 aa2.9□□□□□ -1.94
CTM1YHR109W YTH1Q06102 208 aaPredicted RBP2.9□□□□□ -1.94
CTM1YHR109W CDD1Q06549 142 aa2.9□□□□□ -1.94
CTM1YHR109W YAL067W-AQ8TGK6 75 aa2.9□□□□□ -1.94
CTM1YHR109W EPT1P22140 391 aa2.89□□□□□ -1.95
CTM1YHR109W SPS19P32573 292 aaKnown RBP2.89□□□□□ -1.95
CTM1YHR109W CAT2P32796 670 aaKnown RBP2.89□□□□□ -1.95
CTM1YHR109W YRB1P41920 201 aaKnown RBP2.89□□□□□ -1.95
CTM1YHR109W MRPS16Q02608 121 aa2.89□□□□□ -1.95
CTM1YHR109W YMR226CQ05016 267 aaKnown RBP2.89□□□□□ -1.95
CTM1YHR109W TPI1P00942 248 aaKnown RBP2.89□□□□□ -1.95
CTM1YHR109W HTB1P02293 131 aaKnown RBP2.89□□□□□ -1.95
CTM1YHR109W HTB2P02294 131 aa2.89□□□□□ -1.95
CTM1YHR109W IDH1P28834 360 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
CTM1YHR109W MRPL27P36526 146 aaPredicted RBP2.89□□□□□ -1.95
CTM1YHR109W ADO1P47143 340 aaKnown RBP2.89□□□□□ -1.95
CTM1YHR109W YGL262WP53054 175 aa2.89□□□□□ -1.95
CTM1YHR109W NIF3P53081 288 aa2.89□□□□□ -1.95
CTM1YHR109W NCB2Q92317 146 aa2.89□□□□□ -1.95
CTM1YHR109W RPL28P02406 149 aaKnown RBP2.88□□□□□ -1.95
CTM1YHR109W YKR104WP0CE69 306 aa2.88□□□□□ -1.95
CTM1YHR109W FZO1P38297 855 aa2.88□□□□□ -1.95
CTM1YHR109W YHR127WP38833 243 aaKnown RBP2.88□□□□□ -1.95
CTM1YHR109W YGL118CP53132 145 aa2.88□□□□□ -1.95
CTM1YHR109W YMR114CQ04471 368 aaKnown RBP2.88□□□□□ -1.95
CTM1YHR109W ECM19Q06011 112 aa2.88□□□□□ -1.95
CTM1YHR109W ATG17Q06410 417 aa2.88□□□□□ -1.95
CTM1YHR109W YPR147CQ06522 304 aaKnown RBP2.88□□□□□ -1.95
CTM1YHR109W TRM10Q12400 293 aa2.88□□□□□ -1.95
CTM1YHR109W YCL012CQ8J0M4 134 aa2.88□□□□□ -1.95
CTM1YHR109W NOP19P53317 196 aaPredicted RBP2.87□□□□□ -1.95
CTM1YHR109W SPG4Q04438 115 aa2.87□□□□□ -1.95
CTM1YHR109W TMC1Q08422 150 aaPredicted RBP2.87□□□□□ -1.95
CTM1YHR109W RPL27AP0C2H6 136 aaKnown RBP2.87□□□□□ -1.95
CTM1YHR109W RPL27BP0C2H7 136 aaKnown RBP2.87□□□□□ -1.95
CTM1YHR109W PPH21P23594 369 aa2.87□□□□□ -1.95
CTM1YHR109W RFA3P26755 122 aaKnown RBP2.87□□□□□ -1.95
CTM1YHR109W RPB9P27999 122 aa2.87□□□□□ -1.95
CTM1YHR109W GDH2P33327 1092 aaKnown RBP2.87□□□□□ -1.95
CTM1YHR109W YKL075CP36083 450 aa2.87□□□□□ -1.95
CTM1YHR109W DBP7P36120 742 aaKnown RBP2.87□□□□□ -1.95
CTM1YHR109W HMT1P38074 348 aa2.87□□□□□ -1.95
CTM1YHR109W YBL081WP38180 368 aaKnown RBP2.87□□□□□ -1.95
CTM1YHR109W CPR7P47103 393 aa2.87□□□□□ -1.95
CTM1YHR109W SWT21P53873 357 aaPredicted RBP2.87□□□□□ -1.95
CTM1YHR109W HEM25Q07534 307 aa2.87□□□□□ -1.95
CTM1YHR109W JLP1Q12358 412 aa2.87□□□□□ -1.95
CTM1YHR109W PCL1P24867 279 aa2.86□□□□□ -1.95
CTM1YHR109W YEL045CP32616 141 aa2.86□□□□□ -1.95
CTM1YHR109W PHO89P38361 574 aa2.86□□□□□ -1.95
CTM1YHR109W EDC2P40023 145 aaPredicted RBP2.86□□□□□ -1.95
CTM1YHR109W MGA1P53050 456 aa2.86□□□□□ -1.95
CTM1YHR109W LIF1P53150 421 aa2.86□□□□□ -1.95
CTM1YHR109W YGL039WP53183 348 aaKnown RBP2.86□□□□□ -1.95
CTM1YHR109W YGL034CP53186 121 aa2.86□□□□□ -1.95
CTM1YHR109W ACT1P60010 375 aaKnown RBP2.86□□□□□ -1.95
CTM1YHR109W YDR222WQ04925 415 aa2.86□□□□□ -1.95
CTM1YHR109W DFM1Q12743 341 aaKnown RBP2.86□□□□□ -1.95
CTM1YHR109W ARN2P38724 620 aa2.85□□□□□ -1.95
CTM1YHR109W PRE6P40303 254 aaKnown RBP2.85□□□□□ -1.95
CTM1YHR109W MIC26P50087 233 aa2.85□□□□□ -1.95
CTM1YHR109W YGR018CP53211 109 aa2.85□□□□□ -1.95
CTM1YHR109W SMD2Q06217 110 aaKnown RBP2.85□□□□□ -1.95
CTM1YHR109W GRE1Q08969 168 aa2.85□□□□□ -1.95
CTM1YHR109W TIR4Q12218 487 aaPredicted RBP2.85□□□□□ -1.95
CTM1YHR109W DCN1Q12395 269 aa2.85□□□□□ -1.95
CTM1YHR109W YOL085CQ99345 113 aa2.85□□□□□ -1.95
CTM1YHR109W COX10P21592 462 aa2.84□□□□□ -1.95
CTM1YHR109W SSO1P32867 290 aa2.84□□□□□ -1.95
CTM1YHR109W PRX1P34227 261 aaKnown RBP2.84□□□□□ -1.95
CTM1YHR109W MRPL39P36533 70 aa2.84□□□□□ -1.95
CTM1YHR109W NUP57P48837 541 aa2.84□□□□□ -1.95
CTM1YHR109W NSA1P53136 463 aaPredicted RBP2.84□□□□□ -1.95
CTM1YHR109W CAX4P53223 239 aa2.84□□□□□ -1.95
CTM1YHR109W SLX9P53251 210 aaPredicted RBP2.84□□□□□ -1.95
CTM1YHR109W YPL039WQ03080 316 aa2.84□□□□□ -1.95
CTM1YHR109W SEI1Q06058 285 aa2.84□□□□□ -1.95
CTM1YHR109W RRP40Q08285 240 aaKnown RBP2.84□□□□□ -1.95
CTM1YHR109W PSK1P31374 1356 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms