RNA–Protein interactions for RNA: YDR205W

MSC2, Transcript of Endoplasmic reticulum zinc transporter, yeast

Gene MSC2, Length 2,175 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC2	YDR205W	RRN9	P53437	365 aa		4.09	□□□□□ -1.75
MSC2	YDR205W	PFA5	Q03289	374 aa		4.09	□□□□□ -1.75
MSC2	YDR205W	DML1	Q03652	475 aa		4.09	□□□□□ -1.75
MSC2	YDR205W	INP1	Q03694	420 aa		4.09	□□□□□ -1.75
MSC2	YDR205W	YMR315W	Q04869	349 aa	Known RBP	4.09	□□□□□ -1.75
MSC2	YDR205W	RAX1	Q08760	435 aa		4.09	□□□□□ -1.75
MSC2	YDR205W	YOR029W	Q12243	111 aa		4.09	□□□□□ -1.75
MSC2	YDR205W	YDL177C	Q12257	170 aa		4.09	□□□□□ -1.75
MSC2	YDR205W	TY1A-NL1	Q12391	440 aa	Known RBP	4.09	□□□□□ -1.75
MSC2	YDR205W	HFA1	P32874	2273 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	ERD2	P18414	219 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	ZRC1	P20107	442 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	UTR1	P21373	530 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	YPS1	P32329	569 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	YEF1	P32622	495 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	TIM12	P32830	109 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	JEN1	P36035	616 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	YKL071W	P36086	256 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	UTP25	P40498	721 aa	Known RBP	4.09	□□□□□ -1.76
MSC2	YDR205W	ATG18	P43601	500 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	DPB11	P47027	764 aa	Predicted RBP	4.09	□□□□□ -1.76
MSC2	YDR205W	MSE1	P48525	536 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	TPN1	P53099	579 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	PAU12	P53343	120 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	HOF1	Q05080	669 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	RXT3	Q07458	294 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	PEX27	Q08580	376 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
MSC2	YDR205W	PSF1	Q12488	208 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	SET6	Q12529	373 aa		4.09	□□□□□ -1.76
MSC2	YDR205W	GLT1	Q12680	2145 aa	Known RBP	4.08	□□□□□ -1.76
MSC2	YDR205W	FMP27	Q06179	2628 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	PDE2	P06776	526 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	PET494	P07390	489 aa	Predicted RBP	4.08	□□□□□ -1.76
MSC2	YDR205W	RPL20A	P0CX23	172 aa	Known RBP	4.08	□□□□□ -1.76
MSC2	YDR205W	RPL20B	P0CX24	172 aa	Predicted RBP	4.08	□□□□□ -1.76
MSC2	YDR205W	NAR1	P23503	491 aa	Known RBP	4.08	□□□□□ -1.76
MSC2	YDR205W	GPI12	P23797	304 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	STP22	P25604	385 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	TRS65	P32893	560 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	GPX1	P36014	167 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	DTR1	P38125	572 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	PAU24	P38155	120 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	GPI16	P38875	610 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	YHR210C	P38893	341 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	VPS52	P39904	641 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	SDP1	P40479	209 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	IRC18	P47056	224 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	YAT1	P80235	687 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	YMR265C	Q03508	461 aa	Known RBP	4.08	□□□□□ -1.76
MSC2	YDR205W	TY1A-DR2	Q03964	440 aa	Known RBP	4.08	□□□□□ -1.76
MSC2	YDR205W	BUR2	Q05949	395 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	SNA4	Q07549	140 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	RRG7	Q08774	242 aa	Predicted RBP	4.08	□□□□□ -1.76
MSC2	YDR205W	VAM3	Q12241	283 aa		4.08	□□□□□ -1.76
MSC2	YDR205W	RPP1A	P05318	106 aa	Predicted RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	SEN2	P16658	377 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	EXG1	P23776	448 aa	Known RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	YCR006C	P25350	157 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	FUN19	P28003	413 aa	Predicted RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	YBR144C	P34215	104 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	UTH1	P36135	365 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	RPP1	P38786	293 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	RTC3	P38804	111 aa	Predicted RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	YHR122W	P38829	231 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	CFD1	P40558	293 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	YJR141W	P47172	347 aa	Predicted RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	PMT5	P52867	743 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	YNR062C	P53748	327 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	YLR460C	P54007	376 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	YPL199C	Q08954	240 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	YDL109C	Q12103	647 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	POM34	Q12445	299 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	CYC1	P00044	109 aa	Predicted RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	AAC1	P04710	309 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	COX9	P07255	59 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	YSF3	P0C074	85 aa	Predicted RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	SAC7	P17121	654 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	SAR1	P20606	190 aa	Known RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	NUP1	P20676	1076 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	DBF2	P22204	572 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	HXT2	P23585	541 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	VMA16	P23968	213 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	FUN26	P31381	517 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	PMT2	P31382	759 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	HIS7	P33734	552 aa	Known RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
MSC2	YDR205W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
MSC2	YDR205W	IMD2	P38697	523 aa	Known RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	NSG1	P38837	291 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	MIT1	P40002	666 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	GET2	P40056	285 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	RFC4	P40339	323 aa	Known RBP	4.07	□□□□□ -1.76
MSC2	YDR205W	HXT9	P40885	567 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	RPE1	P46969	238 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	HIT1	P46973	164 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	HXT11	P54862	567 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	NUP116	Q02630	1113 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	TPP1	Q03796	238 aa		4.07	□□□□□ -1.76
MSC2	YDR205W	MSS11	Q03825	758 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms