RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFA1	YAR007C	UBC9	P50623	157 aa	Predicted RBP	4.97	□□□□□ -1.61
RFA1	YAR007C	CDH1	P53197	566 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	SKO1	Q02100	647 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	HDA2	Q06629	674 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	NDE2	Q07500	545 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	YOR114W	Q12219	294 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	YDL177C	Q12257	170 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	AHC1	Q12433	566 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	AGC1	Q12482	902 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	YPR064W	Q12492	139 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	YIL134C-A	Q45U18	67 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	YPR014C	Q6B0W2	109 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	ODC2	Q99297	307 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	CCH1	P50077	2039 aa		4.97	□□□□□ -1.61
RFA1	YAR007C	TRP4	P07285	380 aa	Predicted RBP	4.96	□□□□□ -1.61
RFA1	YAR007C	ARF2	P19146	181 aa	Known RBP	4.96	□□□□□ -1.61
RFA1	YAR007C	SEC62	P21825	274 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	ADH7	P25377	361 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	PBN1	P25580	416 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	PPZ2	P33329	710 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	MRPL16	P38064	232 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	IML3	P38265	245 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	YPC1	P38298	316 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	YPT35	P38815	214 aa	Known RBP	4.96	□□□□□ -1.61
RFA1	YAR007C	GGC1	P38988	300 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	FAA3	P39002	694 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	PAU15	P40585	124 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	YFR020W	P43600	232 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	EMC4	P53073	190 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	YAP1802	P53309	568 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	MPA43	P53583	542 aa	Predicted RBP	4.96	□□□□□ -1.61
RFA1	YAR007C	CYT2	Q00873	224 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	YMR206W	Q03695	313 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	YMR310C	Q04867	317 aa	Predicted RBP	4.96	□□□□□ -1.61
RFA1	YAR007C	RTK1	Q12100	620 aa	Predicted RBP	4.96	□□□□□ -1.61
RFA1	YAR007C	YLR146W-A	Q2V2P1	62 aa		4.96	□□□□□ -1.61
RFA1	YAR007C	CDC28	P00546	298 aa	Known RBP	4.96	□□□□□ -1.62
RFA1	YAR007C	FUR4	P05316	633 aa	Known RBP	4.96	□□□□□ -1.62
RFA1	YAR007C	CPA1	P07258	411 aa	Known RBP	4.96	□□□□□ -1.62
RFA1	YAR007C	SNF5	P18480	905 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	MRPL27	P36526	146 aa	Predicted RBP	4.96	□□□□□ -1.62
RFA1	YAR007C	YPT31	P38555	223 aa	Known RBP	4.96	□□□□□ -1.62
RFA1	YAR007C	ECM34	P38728	170 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	NIF3	P53081	288 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	NPY1	P53164	384 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	ELA1	P53861	379 aa	Predicted RBP	4.96	□□□□□ -1.62
RFA1	YAR007C	GIM3	P53900	129 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	ADD37	Q03233	198 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	NAT4	Q04751	285 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	RTN1	Q04947	295 aa	Known RBP	4.96	□□□□□ -1.62
RFA1	YAR007C	REX4	Q08237	289 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	TMA17	Q12513	150 aa		4.96	□□□□□ -1.62
RFA1	YAR007C	PRE9	P23638	258 aa	Known RBP	4.95	□□□□□ -1.62
RFA1	YAR007C	RNQ1	P25367	405 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	LAC1	P28496	418 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	KKQ8	P36004	724 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	OMA1	P36163	345 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	MRPL15	P36523	253 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	SDS24	P38314	527 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	SHG1	P38337	142 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	SAF1	P38352	637 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	MGE1	P38523	228 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	PRP39	P39682	629 aa	Known RBP	4.95	□□□□□ -1.62
RFA1	YAR007C	SMB1	P40018	196 aa	Known RBP	4.95	□□□□□ -1.62
RFA1	YAR007C	MXR1	P40029	184 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	SFH5	P47008	294 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	SAM37	P50110	327 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	YGL204C	P53089	101 aa		4.95	□□□□□ -1.62
RFA1	YAR007C	RPS21B	Q3E754	87 aa	Known RBP	4.95	□□□□□ -1.62
RFA1	YAR007C	TMA7	Q3E764	64 aa	Known RBP	4.95	□□□□□ -1.62
RFA1	YAR007C	RIP1	P08067	215 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	CHO1	P08456	276 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	HNM1	P19807	563 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	POP5	P28005	173 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	DCG1	P32460	244 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	MTC7	P32633	139 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	MGM101	P32787	269 aa	Known RBP	4.94	□□□□□ -1.62
RFA1	YAR007C	SEF1	P34228	1148 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	ECM15	P35195	104 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	GCS1	P35197	352 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	POP8	P38208	133 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	NOP16	P40007	231 aa	Known RBP	4.94	□□□□□ -1.62
RFA1	YAR007C	SYS1	P41544	203 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	SLS1	P42900	643 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	BNS1	P50084	137 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	SGF73	P53165	657 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	PRM1	P53835	661 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	APM1	Q00776	475 aa	Predicted RBP	4.94	□□□□□ -1.62
RFA1	YAR007C	CTF19	Q02732	369 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	RSM10	Q03201	203 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	TMA23	Q03525	211 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	BNA5	Q05979	453 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	AIM6	Q07716	390 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	YNR034W-A	Q3E841	98 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	GAL4	P04386	881 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	STE7	P06784	515 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	HVG1	P0CE11	249 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	MCK1	P21965	375 aa	Known RBP	4.94	□□□□□ -1.62
RFA1	YAR007C	ATG15	P25641	520 aa		4.94	□□□□□ -1.62
RFA1	YAR007C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms