RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	RHO4	Q00246	291 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	UBP16	Q02863	499 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	YMR166C	Q03829	368 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY1A-DR2	Q03964	440 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	CTR3	Q06686	241 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPR084W	Q06821	456 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	NGL1	Q08213	363 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	DAP1	Q12091	152 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	PRR2	Q12310	699 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	GPM3	Q12326	303 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	ADH1	P00330	348 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	SOL2	P37262	315 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	PPS1	P38148	807 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	DPB11	P47027	764 aa	Predicted RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	UBX6	P47049	396 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	COX18	P53239	316 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	AQR1	P53943	586 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	CAC2	Q04199	468 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	YDR306C	Q06640	478 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	HRT1	Q08273	121 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	YDL180W	Q12301	547 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY1A-NL1	Q12391	440 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	MPD1	Q12404	318 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	RRD2	Q12461	358 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	SGA1	P08019	549 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	PET9	P18239	318 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	IME1	P21190	360 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	UGA4	P32837	571 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	URA8	P38627	578 aa	Predicted RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	PAC2	P39937	518 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	SPC25	P40014	221 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	YGL262W	P53054	175 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	LSM3	P57743	89 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	ELP4	Q02884	456 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	YMR295C	Q03559	197 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	HRI1	Q05905	244 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	CRT10	Q08226	957 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	CNE1	P27825	502 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	MAC1	P35192	417 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	YKR070W	P36151	352 aa	Known RBP	4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	PTC4	P38089	393 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	APN2	P38207	520 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	YND1	P40009	630 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	DAN1	P47178	298 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	SOL1	P50278	321 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	SDT1	P53078	280 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	AAH1	P53909	347 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	COX20	Q04935	205 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	INM2	Q05533	292 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	BNA5	Q05979	453 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	DAD1	Q12248	94 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	YDL007C-A	Q2V2Q0	85 aa		4.21	□□□□□ -1.73
YDR261C-D	YDR261C-D	RPL40A	P0CH08	128 aa	Known RBP	4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	RPL40B	P0CH09	128 aa	Known RBP	4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	SAM35	P14693	329 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	SRP21	P32342	167 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	AVT1	P47082	602 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	MKC7	P53379	596 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	AAT1	Q01802	451 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	YDR179W-A	Q03983	463 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	YPR063C	Q12160	140 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	TPK3	P05986	398 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	YML003W	P0CF16	290 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	RPS18A	P0CX55	146 aa	Known RBP	4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	RPS18B	P0CX56	146 aa	Predicted RBP	4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	RPB5	P20434	215 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	LRE1	P25579	583 aa	Known RBP	4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	VBA3	P25594	458 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	MRP20	P32387	263 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	HXT1	P32465	570 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	MSC7	P38694	644 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	BXI1	P48558	297 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	CAB4	P53332	305 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	YDL086W	Q07505	273 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	MCP1	Q12106	302 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	PET10	P36139	283 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	TSL1	P38427	1098 aa	Known RBP	4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	GPB2	P39717	880 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	YEA6	P39953	335 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	YIL152W	P40455	235 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	BUD8	P41698	603 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	CIN2	P46670	268 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	YMR160W	Q03823	816 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	YDR444W	Q04093	687 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	UPS1	Q05776	175 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	HPA2	Q06592	156 aa		4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	LPX1	Q12405	387 aa	Known RBP	4.21	□□□□□ -1.74
YDR261C-D	YDR261C-D	OCH1	P31755	480 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	ARP2	P32381	391 aa	Known RBP	4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	YBR096W	P38256	230 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	GOS1	P38736	223 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	NCS6	P53088	359 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	MTM1	P53320	366 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	APP1	P53933	587 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	ATP19	P81451	68 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	YPL034W	Q03083	165 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	YMR253C	Q04835	414 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	LOA1	Q06508	300 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	SWM1	Q12379	170 aa		4.2	□□□□□ -1.74
YDR261C-D	YDR261C-D	TPK1	P06244	397 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms