RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 FAR7P43592 221 aa2.79□□□□□ -1.96
snR42snR42 IMD4P50094 524 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 MAL12P53341 584 aa2.79□□□□□ -1.96
snR42snR42 MRPL19P53875 158 aa2.79□□□□□ -1.96
snR42snR42 SPR6Q01684 191 aa2.79□□□□□ -1.96
snR42snR42 RCE1Q03530 315 aa2.79□□□□□ -1.96
snR42snR42 YDR102CQ03864 110 aa2.79□□□□□ -1.96
snR42snR42 HMO1Q03973 246 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 YPR127WQ06494 345 aa2.79□□□□□ -1.96
snR42snR42 DTD1Q07648 150 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 SPC3Q12133 184 aa2.79□□□□□ -1.96
snR42snR42 NCE102Q12207 173 aaRIP-Chip data2.79□□□□□ -1.96not detected
snR42snR42 YOR097CQ12274 175 aaPredicted RBP2.79□□□□□ -1.96
snR42snR42 YLR126CQ12288 251 aa2.79□□□□□ -1.96
snR42snR42 RNH203Q12338 110 aa2.79□□□□□ -1.96
snR42snR42 DBP10Q12389 995 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 HMS1Q12398 434 aa2.79□□□□□ -1.96
snR42snR42 YOL159C-AQ3E769 90 aa2.79□□□□□ -1.96
snR42snR42 RPN13O13563 156 aa2.78□□□□□ -1.96
snR42snR42 MSW1P04803 379 aa2.78□□□□□ -1.96
snR42snR42 RPC40P07703 335 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 CAR2P07991 424 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 RPS16AP0CX51 143 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 RPS16BP0CX52 143 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 PMR1P13586 950 aa2.78□□□□□ -1.96
snR42snR42 EXG1P23776 448 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 KRR1P25586 316 aaPredicted RBP2.78□□□□□ -1.96
snR42snR42 CAM1P29547 415 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 MDH3P32419 343 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
snR42snR42 SPC29P33419 253 aa2.78□□□□□ -1.96
snR42snR42 MSN4P33749 630 aa2.78□□□□□ -1.96
snR42snR42 MRPS5P33759 307 aa2.78□□□□□ -1.96
snR42snR42 NIC96P34077 839 aa2.78□□□□□ -1.96
snR42snR42 HCS1P34243 683 aa2.78□□□□□ -1.96
snR42snR42 YBR241CP38142 488 aa2.78□□□□□ -1.96
snR42snR42 SRO77P38163 1010 aa2.78□□□□□ -1.96
snR42snR42 YHL037CP38733 133 aa2.78□□□□□ -1.96
snR42snR42 PHO90P39535 881 aa2.78□□□□□ -1.96
snR42snR42 GDI1P39958 451 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 YEL068CP39977 110 aa2.78□□□□□ -1.96
snR42snR42 THO1P40040 218 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 PIG2P40187 538 aa2.78□□□□□ -1.96
snR42snR42 GAT2P40209 560 aa2.78□□□□□ -1.96
snR42snR42 VHR1P40522 640 aa2.78□□□□□ -1.96
snR42snR42 GDS1P41913 522 aa2.78□□□□□ -1.96
snR42snR42 YFL051CP43552 160 aa2.78□□□□□ -1.96
snR42snR42 RMR1P53060 241 aa2.78□□□□□ -1.96
snR42snR42 YGL235WP53071 178 aa2.78□□□□□ -1.96
snR42snR42 YGL101WP53144 215 aa2.78□□□□□ -1.96
snR42snR42 PRM8P53174 237 aa2.78□□□□□ -1.96
snR42snR42 MPP6P53725 186 aaPredicted RBP2.78□□□□□ -1.96
snR42snR42 RPL6AQ02326 176 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 NUP116Q02630 1113 aa2.78□□□□□ -1.96
snR42snR42 YMR226CQ05016 267 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 TMC1Q08422 150 aaPredicted RBP2.78□□□□□ -1.96
snR42snR42 UIP4Q08926 304 aa2.78□□□□□ -1.96
snR42snR42 YPL225WQ08971 146 aaKnown RBP2.78□□□□□ -1.96
snR42snR42 NFI1Q12216 726 aa2.78□□□□□ -1.96
snR42snR42 TAF3Q12297 353 aa2.78□□□□□ -1.96
snR42snR42 SET6Q12529 373 aa2.78□□□□□ -1.96
snR42snR42 SPO24Q3E752 67 aa2.78□□□□□ -1.96
snR42snR42 YHR214C-EQ8TGK0 99 aa2.78□□□□□ -1.96
snR42snR42 HBN1Q96VH4 193 aa2.78□□□□□ -1.96
snR42snR42 FBA1P14540 359 aaKnown RBP2.77□□□□□ -1.97
snR42snR42 URE2P23202 354 aaKnown RBP2.77□□□□□ -1.97
snR42snR42 YME2P32843 850 aa2.77□□□□□ -1.97
snR42snR42 PAD1P33751 242 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
snR42snR42 YKL187CP34231 750 aa2.77□□□□□ -1.97
snR42snR42 RTC2P38279 296 aa2.77□□□□□ -1.97
snR42snR42 VBA2P38358 474 aaKnown RBP2.77□□□□□ -1.97
snR42snR42 YHL044WP38727 235 aa2.77□□□□□ -1.97
snR42snR42 ISC1P40015 477 aaKnown RBP2.77□□□□□ -1.97
snR42snR42 YER084WP40057 128 aa2.77□□□□□ -1.97
snR42snR42 YER121WP40076 114 aa2.77□□□□□ -1.97
snR42snR42 SLZ1P40167 298 aa2.77□□□□□ -1.97
snR42snR42 YJL055WP47044 245 aa2.77□□□□□ -1.97
snR42snR42 SIP18P50263 79 aa2.77□□□□□ -1.97
snR42snR42 UBC13P52490 153 aa2.77□□□□□ -1.97
snR42snR42 NQM1P53228 333 aaPredicted RBP2.77□□□□□ -1.97
snR42snR42 RRN9P53437 365 aa2.77□□□□□ -1.97
snR42snR42 CRZ1P53968 678 aa2.77□□□□□ -1.97
snR42snR42 ASI1P54074 624 aa2.77□□□□□ -1.97
snR42snR42 SMX3P54999 86 aaPredicted RBP2.77□□□□□ -1.97
snR42snR42 YPL077CQ02831 240 aa2.77□□□□□ -1.97
snR42snR42 ABZ2Q03266 374 aa2.77□□□□□ -1.97
snR42snR42 SEC13Q04491 297 aaKnown RBP2.77□□□□□ -1.97
snR42snR42 NNT1Q05874 261 aa2.77□□□□□ -1.97
snR42snR42 IPK1Q06667 281 aa2.77□□□□□ -1.97
snR42snR42 PML1Q07930 204 aaPredicted RBP2.77□□□□□ -1.97
snR42snR42 MIM1Q08176 113 aa2.77□□□□□ -1.97
snR42snR42 GRE1Q08969 168 aa2.77□□□□□ -1.97
snR42snR42 GEP5Q12393 293 aa2.77□□□□□ -1.97
snR42snR42 SEC16P48415 2195 aaKnown RBP2.77□□□□□ -1.97
snR42snR42 ADE8P04161 214 aa2.76□□□□□ -1.97
snR42snR42 SNF4P12904 322 aa2.76□□□□□ -1.97
snR42snR42 DPM1P14020 267 aaKnown RBP2.76□□□□□ -1.97
snR42snR42 CNA1P23287 553 aa2.76□□□□□ -1.97
snR42snR42 POL4P25615 582 aa2.76□□□□□ -1.97
snR42snR42 PPA2P28239 310 aa2.76□□□□□ -1.97
snR42snR42 VPH2P32341 215 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms