RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W CHA1P25379 360 aaKnown RBP2.82□□□□□ -1.96
UBP8YMR223W TOA2P32774 122 aa2.82□□□□□ -1.96
UBP8YMR223W SKN1P33336 771 aa2.82□□□□□ -1.96
UBP8YMR223W SWD2P36104 329 aaPredicted RBP2.82□□□□□ -1.96
UBP8YMR223W DER1P38307 211 aa2.82□□□□□ -1.96
UBP8YMR223W TRM5P38793 499 aa2.82□□□□□ -1.96
UBP8YMR223W IKI1P38874 309 aa2.82□□□□□ -1.96
UBP8YMR223W SEO1P39709 593 aa2.82□□□□□ -1.96
UBP8YMR223W EDC3P39998 551 aaKnown RBP2.82□□□□□ -1.96
UBP8YMR223W SNX4P47057 423 aa2.82□□□□□ -1.96
UBP8YMR223W YPT32P51996 222 aaKnown RBP2.82□□□□□ -1.96
UBP8YMR223W MGA1P53050 456 aa2.82□□□□□ -1.96
UBP8YMR223W OKP1P53298 406 aa2.82□□□□□ -1.96
UBP8YMR223W MTM1P53320 366 aa2.82□□□□□ -1.96
UBP8YMR223W YPL080CQ02826 108 aa2.82□□□□□ -1.96
UBP8YMR223W NDE2Q07500 545 aa2.82□□□□□ -1.96
UBP8YMR223W IRC25Q07951 179 aa2.82□□□□□ -1.96
UBP8YMR223W LDS2Q08218 356 aa2.82□□□□□ -1.96
UBP8YMR223W ECM5Q03214 1411 aa2.82□□□□□ -1.96
UBP8YMR223W HIS1P00498 297 aaKnown RBP2.81□□□□□ -1.96
UBP8YMR223W ATP6P00854 259 aa2.81□□□□□ -1.96
UBP8YMR223W PAB1P04147 577 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
UBP8YMR223W VMA5P31412 392 aaKnown RBP2.81□□□□□ -1.96
UBP8YMR223W APE2P32454 952 aaKnown RBP2.81□□□□□ -1.96
UBP8YMR223W CSE1P33307 960 aa2.81□□□□□ -1.96
UBP8YMR223W PRX1P34227 261 aaKnown RBP2.81□□□□□ -1.96
UBP8YMR223W MCH2P36032 473 aa2.81□□□□□ -1.96
UBP8YMR223W ECM8P38246 354 aa2.81□□□□□ -1.96
UBP8YMR223W SSH1P38353 490 aaKnown RBP2.81□□□□□ -1.96
UBP8YMR223W RCK2P38623 610 aa2.81□□□□□ -1.96
UBP8YMR223W BMT5P40493 336 aa2.81□□□□□ -1.96
UBP8YMR223W SFH5P47008 294 aa2.81□□□□□ -1.96
UBP8YMR223W ADO1P47143 340 aaKnown RBP2.81□□□□□ -1.96
UBP8YMR223W PHB2P50085 310 aa2.81□□□□□ -1.96
UBP8YMR223W ALG13P53178 202 aa2.81□□□□□ -1.96
UBP8YMR223W YGR042WP53227 271 aa2.81□□□□□ -1.96
UBP8YMR223W YLR460CP54007 376 aa2.81□□□□□ -1.96
UBP8YMR223W RVB1Q03940 463 aaKnown RBP2.81□□□□□ -1.96
UBP8YMR223W YDR387CQ04162 555 aa2.81□□□□□ -1.96
UBP8YMR223W VBA1Q04301 562 aa2.81□□□□□ -1.96
UBP8YMR223W APC9Q12107 265 aa2.81□□□□□ -1.96
UBP8YMR223W URA6P15700 204 aa2.8□□□□□ -1.96
UBP8YMR223W YCR102CP25608 368 aa2.8□□□□□ -1.96
UBP8YMR223W ITR2P30606 609 aa2.8□□□□□ -1.96
UBP8YMR223W NUP2P32499 720 aa2.8□□□□□ -1.96
UBP8YMR223W YKL187CP34231 750 aa2.8□□□□□ -1.96
UBP8YMR223W CLG1P35190 452 aa2.8□□□□□ -1.96
UBP8YMR223W CAF4P36130 643 aa2.8□□□□□ -1.96
UBP8YMR223W YBR241CP38142 488 aa2.8□□□□□ -1.96
UBP8YMR223W MRX3P38172 270 aa2.8□□□□□ -1.96
UBP8YMR223W FZO1P38297 855 aa2.8□□□□□ -1.96
UBP8YMR223W VMA22P38784 181 aa2.8□□□□□ -1.96
UBP8YMR223W CYC2P38909 366 aa2.8□□□□□ -1.96
UBP8YMR223W YAL037WP39728 267 aa2.8□□□□□ -1.96
UBP8YMR223W YER137CP40083 148 aaKnown RBP2.8□□□□□ -1.96
UBP8YMR223W YCH1P42937 148 aa2.8□□□□□ -1.96
UBP8YMR223W YFL040WP43562 540 aa2.8□□□□□ -1.96
UBP8YMR223W NBP35P52920 328 aa2.8□□□□□ -1.96
UBP8YMR223W NQM1P53228 333 aaPredicted RBP2.8□□□□□ -1.96
UBP8YMR223W RCF2P53721 224 aa2.8□□□□□ -1.96
UBP8YMR223W YNR066CP53752 436 aa2.8□□□□□ -1.96
UBP8YMR223W YMR181CQ03231 154 aa2.8□□□□□ -1.96
UBP8YMR223W RIF2Q06208 395 aa2.8□□□□□ -1.96
UBP8YMR223W TPT1Q12272 230 aaKnown RBP2.8□□□□□ -1.96
UBP8YMR223W RPP0P05317 312 aaKnown RBP2.79□□□□□ -1.96
UBP8YMR223W POF1P25576 258 aa2.79□□□□□ -1.96
UBP8YMR223W VAM7P32912 316 aa2.79□□□□□ -1.96
UBP8YMR223W IST2P38250 946 aa2.79□□□□□ -1.96
UBP8YMR223W DDI1P40087 428 aa2.79□□□□□ -1.96
UBP8YMR223W COG3P40094 801 aa2.79□□□□□ -1.96
UBP8YMR223W MRPL49P40858 161 aaPredicted RBP2.79□□□□□ -1.96
UBP8YMR223W YJR111CP47148 283 aaKnown RBP2.79□□□□□ -1.96
UBP8YMR223W SBH2P52871 88 aa2.79□□□□□ -1.96
UBP8YMR223W YIP1P53039 248 aa2.79□□□□□ -1.96
UBP8YMR223W YGL204CP53089 101 aa2.79□□□□□ -1.96
UBP8YMR223W PCP1P53259 346 aa2.79□□□□□ -1.96
UBP8YMR223W YMR114CQ04471 368 aaKnown RBP2.79□□□□□ -1.96
UBP8YMR223W RFU1Q08003 200 aa2.79□□□□□ -1.96
UBP8YMR223W YOL019WQ08157 551 aa2.79□□□□□ -1.96
UBP8YMR223W SGT1Q08446 395 aa2.79□□□□□ -1.96
UBP8YMR223W YPL150WQ12152 901 aa2.79□□□□□ -1.96
UBP8YMR223W DET1Q99288 334 aaKnown RBP2.79□□□□□ -1.96
UBP8YMR223W RPS28BP0C0X0 67 aaKnown RBP2.78□□□□□ -1.96
UBP8YMR223W ARF1P11076 181 aaKnown RBP2.78□□□□□ -1.96
UBP8YMR223W GCY1P14065 312 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
UBP8YMR223W CUP2P15315 225 aa2.78□□□□□ -1.96
UBP8YMR223W TIP1P27654 210 aaPredicted RBP2.78□□□□□ -1.96
UBP8YMR223W UBC8P28263 218 aa2.78□□□□□ -1.96
UBP8YMR223W RAD5P32849 1169 aaPredicted RBP2.78□□□□□ -1.96
UBP8YMR223W YCR041WP37265 110 aa2.78□□□□□ -1.96
UBP8YMR223W ECM13P38195 257 aa2.78□□□□□ -1.96
UBP8YMR223W GOS1P38736 223 aa2.78□□□□□ -1.96
UBP8YMR223W SMB1P40018 196 aaKnown RBP2.78□□□□□ -1.96
UBP8YMR223W MMF1P40185 145 aaKnown RBP2.78□□□□□ -1.96
UBP8YMR223W RPL10P41805 221 aaKnown RBP2.78□□□□□ -1.96
UBP8YMR223W COS4P43542 379 aa2.78□□□□□ -1.96
UBP8YMR223W CIN2P46670 268 aa2.78□□□□□ -1.96
UBP8YMR223W APS3P47064 194 aa2.78□□□□□ -1.96
UBP8YMR223W YJR079WP47126 109 aa2.78□□□□□ -1.96
UBP8YMR223W YJR141WP47172 347 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms