RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C MDM32Q12171 622 aa2.71□□□□□ -1.98
NMD2YHR077C YDL007C-AQ2V2Q0 85 aa2.71□□□□□ -1.98
NMD2YHR077C YPR117WQ06116 2489 aa2.71□□□□□ -1.98
NMD2YHR077C POL2P21951 2222 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C TY1A-DR4O74302 440 aa2.71□□□□□ -1.98
NMD2YHR077C SOD2P00447 233 aa2.71□□□□□ -1.98
NMD2YHR077C RAD52P06778 471 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C TY1A-HP0C2I4 478 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C TY1A-AP0CX57 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-PR1P0CX58 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-ORP0CX59 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-PR2P0CX60 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-DR5P0CX65 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-ER2P0CX66 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-GR3P0CX67 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-LR1P0CX68 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-MR2P0CX69 440 aa2.71□□□□□ -1.98
NMD2YHR077C PBN1P25580 416 aa2.71□□□□□ -1.98
NMD2YHR077C ERG9P29704 444 aa2.71□□□□□ -1.98
NMD2YHR077C MDH3P32419 343 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
NMD2YHR077C VPS17P32913 551 aa2.71□□□□□ -1.98
NMD2YHR077C PET112P33893 541 aa2.71□□□□□ -1.98
NMD2YHR077C QDR1P40475 563 aa2.71□□□□□ -1.98
NMD2YHR077C CFD1P40558 293 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-JR2P47099 440 aa2.71□□□□□ -1.98
NMD2YHR077C YJR120WP47157 116 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-DR1Q03856 440 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-ML1Q04706 440 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C SNO4Q04902 237 aa2.71□□□□□ -1.98
NMD2YHR077C PAL1Q05518 499 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C YLR346CQ06139 101 aa2.71□□□□□ -1.98
NMD2YHR077C THI73Q07904 523 aa2.71□□□□□ -1.98
NMD2YHR077C HRT1Q08273 121 aa2.71□□□□□ -1.98
NMD2YHR077C HSP33Q08914 237 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C YPL199CQ08954 240 aa2.71□□□□□ -1.98
NMD2YHR077C HSP32Q08992 237 aa2.71□□□□□ -1.98
NMD2YHR077C TMS1Q12116 473 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-BRQ12217 440 aa2.71□□□□□ -1.98
NMD2YHR077C YDR262WQ12331 272 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-NL2Q12470 440 aa2.71□□□□□ -1.98
NMD2YHR077C YOR343CQ12484 108 aa2.71□□□□□ -1.98
NMD2YHR077C TY1A-GR2Q12485 440 aa2.71□□□□□ -1.98
NMD2YHR077C FUR4P05316 633 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C ADK1P07170 222 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C PTP1P25044 335 aa2.71□□□□□ -1.98
NMD2YHR077C MDL1P33310 695 aa2.71□□□□□ -1.98
NMD2YHR077C YKL071WP36086 256 aa2.71□□□□□ -1.98
NMD2YHR077C TAT1P38085 619 aa2.71□□□□□ -1.98
NMD2YHR077C RPS20P38701 121 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C RTT105P40063 208 aa2.71□□□□□ -1.98
NMD2YHR077C YPS6P40583 537 aa2.71□□□□□ -1.98
NMD2YHR077C CAT5P41735 233 aa2.71□□□□□ -1.98
NMD2YHR077C SFH5P47008 294 aa2.71□□□□□ -1.98
NMD2YHR077C RPS12P48589 143 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C SPT20P50875 604 aa2.71□□□□□ -1.98
NMD2YHR077C EGD1Q02642 157 aaKnown RBP2.71□□□□□ -1.98
NMD2YHR077C YMR210WQ03649 449 aa2.71□□□□□ -1.98
NMD2YHR077C OPT2Q06593 877 aa2.71□□□□□ -1.98
NMD2YHR077C RAX1Q08760 435 aa2.71□□□□□ -1.98
NMD2YHR077C BAG7Q12128 409 aa2.71□□□□□ -1.98
NMD2YHR077C UTR1P21373 530 aa2.7□□□□□ -1.98
NMD2YHR077C PPA2P28239 310 aa2.7□□□□□ -1.98
NMD2YHR077C TEF4P36008 412 aaKnown RBP2.7□□□□□ -1.98
NMD2YHR077C APL3P38065 1025 aa2.7□□□□□ -1.98
NMD2YHR077C YBR063CP38083 404 aa2.7□□□□□ -1.98
NMD2YHR077C MLH1P38920 769 aa2.7□□□□□ -1.98
NMD2YHR077C DPB11P47027 764 aaPredicted RBP2.7□□□□□ -1.98
NMD2YHR077C YGR266WP53326 701 aa2.7□□□□□ -1.98
NMD2YHR077C TDA1Q03533 586 aa2.7□□□□□ -1.98
NMD2YHR077C GPN3Q06543 272 aa2.7□□□□□ -1.98
NMD2YHR077C GRC3Q07845 632 aa2.7□□□□□ -1.98
NMD2YHR077C YOR385WQ08909 290 aa2.7□□□□□ -1.98
NMD2YHR077C YLR358CO13565 187 aa2.7□□□□□ -1.98
NMD2YHR077C RPL1AP0CX43 217 aaKnown RBP2.7□□□□□ -1.98
NMD2YHR077C RPL1BP0CX44 217 aaKnown RBP2.7□□□□□ -1.98
NMD2YHR077C SAR1P20606 190 aaKnown RBP2.7□□□□□ -1.98
NMD2YHR077C GAS1P22146 559 aaKnown RBP2.7□□□□□ -1.98
NMD2YHR077C SEC22P22214 214 aa2.7□□□□□ -1.98
NMD2YHR077C HCM1P25364 564 aa2.7□□□□□ -1.98
NMD2YHR077C CNE1P27825 502 aa2.7□□□□□ -1.98
NMD2YHR077C HSP150P32478 413 aa2.7□□□□□ -1.98
NMD2YHR077C NIC96P34077 839 aa2.7□□□□□ -1.98
NMD2YHR077C SRY1P36007 326 aa2.7□□□□□ -1.98
NMD2YHR077C HXT9P40885 567 aa2.7□□□□□ -1.98
NMD2YHR077C BAP3P41815 604 aa2.7□□□□□ -1.98
NMD2YHR077C SLS1P42900 643 aa2.7□□□□□ -1.98
NMD2YHR077C SPG5P42933 373 aa2.7□□□□□ -1.98
NMD2YHR077C OTU1P43558 301 aa2.7□□□□□ -1.98
NMD2YHR077C RPS0BP46654 252 aaKnown RBP2.7□□□□□ -1.98
NMD2YHR077C LCL3P53153 274 aa2.7□□□□□ -1.98
NMD2YHR077C HXT11P54862 567 aa2.7□□□□□ -1.98
NMD2YHR077C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
NMD2YHR077C RRN11Q04712 507 aa2.7□□□□□ -1.98
NMD2YHR077C SEI1Q06058 285 aa2.7□□□□□ -1.98
NMD2YHR077C YLR352WQ06479 807 aa2.7□□□□□ -1.98
NMD2YHR077C MLC2Q06580 163 aa2.7□□□□□ -1.98
NMD2YHR077C YPR172WQ06608 200 aa2.7□□□□□ -1.98
NMD2YHR077C TSR2Q06672 205 aaKnown RBP2.7□□□□□ -1.98
NMD2YHR077C BTS1Q12051 335 aa2.7□□□□□ -1.98
NMD2YHR077C YDL109CQ12103 647 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms