RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C WBP1P33767 430 aaKnown RBP6.29□□□□□ -1.4
TDP1YBR223C TAF14P35189 244 aa6.29□□□□□ -1.4
TDP1YBR223C VBA2P38358 474 aaKnown RBP6.29□□□□□ -1.4
TDP1YBR223C PTI1P39927 425 aaPredicted RBP6.29□□□□□ -1.4
TDP1YBR223C SWM2P40342 146 aa6.29□□□□□ -1.4
TDP1YBR223C VNX1P42839 908 aa6.29□□□□□ -1.4
TDP1YBR223C SSY1Q03770 852 aa6.29□□□□□ -1.4
TDP1YBR223C UTP15Q04305 513 aaKnown RBP6.29□□□□□ -1.4
TDP1YBR223C COX20Q04935 205 aa6.29□□□□□ -1.4
TDP1YBR223C GIC2Q06648 383 aa6.29□□□□□ -1.4
TDP1YBR223C SAC7P17121 654 aa6.28□□□□□ -1.4
TDP1YBR223C MAG1P22134 296 aaKnown RBP6.28□□□□□ -1.4
TDP1YBR223C CNE1P27825 502 aa6.28□□□□□ -1.4
TDP1YBR223C ERG24P32462 438 aaKnown RBP6.28□□□□□ -1.4
TDP1YBR223C MSS1P32559 526 aaPredicted RBP6.28□□□□□ -1.4
TDP1YBR223C RPC34P32910 317 aa6.28□□□□□ -1.4
TDP1YBR223C YKL071WP36086 256 aa6.28□□□□□ -1.4
TDP1YBR223C QDR1P40475 563 aa6.28□□□□□ -1.4
TDP1YBR223C VHT1P53241 593 aa6.28□□□□□ -1.4
TDP1YBR223C TY1A-MR1Q04215 440 aa6.28□□□□□ -1.4
TDP1YBR223C UTP21Q06078 939 aaPredicted RBP6.28□□□□□ -1.4
TDP1YBR223C THI73Q07904 523 aa6.28□□□□□ -1.4
TDP1YBR223C FEX2Q08991 375 aa6.28□□□□□ -1.4
TDP1YBR223C BTS1Q12051 335 aa6.28□□□□□ -1.4
TDP1YBR223C TY1A-BLQ12266 440 aa6.28□□□□□ -1.4
TDP1YBR223C NPC2Q12408 173 aa6.28□□□□□ -1.4
TDP1YBR223C PSF1Q12488 208 aa6.28□□□□□ -1.4
TDP1YBR223C FSH3Q99369 266 aa6.28□□□□□ -1.4
TDP1YBR223C CKS1P20486 150 aaKnown RBP6.28□□□□□ -1.4
TDP1YBR223C RNQ1P25367 405 aa6.28□□□□□ -1.4
TDP1YBR223C GPX1P36014 167 aa6.28□□□□□ -1.4
TDP1YBR223C SRX1P36077 127 aa6.28□□□□□ -1.4
TDP1YBR223C TCM62P38228 572 aaKnown RBP6.28□□□□□ -1.4
TDP1YBR223C OCA5P38738 679 aa6.28□□□□□ -1.4
TDP1YBR223C ALB1P47019 175 aaPredicted RBP6.28□□□□□ -1.4
TDP1YBR223C UBX6P47049 396 aa6.28□□□□□ -1.4
TDP1YBR223C POP6P53218 158 aa6.28□□□□□ -1.4
TDP1YBR223C YGR266WP53326 701 aa6.28□□□□□ -1.4
TDP1YBR223C CWC25P53854 179 aaKnown RBP6.28□□□□□ -1.4
TDP1YBR223C SWS2P53937 143 aa6.28□□□□□ -1.4
TDP1YBR223C ASI3P53983 676 aa6.28□□□□□ -1.4
TDP1YBR223C HXT11P54862 567 aa6.28□□□□□ -1.4
TDP1YBR223C TY1A-DR2Q03964 440 aaKnown RBP6.28□□□□□ -1.4
TDP1YBR223C HDA2Q06629 674 aa6.28□□□□□ -1.4
TDP1YBR223C LUC7Q07508 261 aaPredicted RBP6.28□□□□□ -1.4
TDP1YBR223C YDL109CQ12103 647 aa6.28□□□□□ -1.4
TDP1YBR223C SKM1Q12469 655 aa6.28□□□□□ -1.4
TDP1YBR223C YBR085C-AO43137 85 aa6.27□□□□□ -1.41
TDP1YBR223C ARG80P07249 177 aa6.27□□□□□ -1.41
TDP1YBR223C PBN1P25580 416 aa6.27□□□□□ -1.41
TDP1YBR223C HOG1P32485 435 aa6.27□□□□□ -1.41
TDP1YBR223C RPP1P38786 293 aa6.27□□□□□ -1.41
TDP1YBR223C GEP4P38812 185 aa6.27□□□□□ -1.41
TDP1YBR223C FAA3P39002 694 aa6.27□□□□□ -1.41
TDP1YBR223C YMR144WP40214 342 aaKnown RBP6.27□□□□□ -1.41
TDP1YBR223C SLS1P42900 643 aa6.27□□□□□ -1.41
TDP1YBR223C LOH1P47055 219 aa6.27□□□□□ -1.41
TDP1YBR223C YGL204CP53089 101 aa6.27□□□□□ -1.41
TDP1YBR223C RSC58Q07979 502 aa6.27□□□□□ -1.41
TDP1YBR223C SYC1Q08553 188 aaPredicted RBP6.27□□□□□ -1.41
TDP1YBR223C TMS1Q12116 473 aa6.27□□□□□ -1.41
TDP1YBR223C BAR1P12630 587 aa6.26□□□□□ -1.41
TDP1YBR223C NUP1P20676 1076 aa6.26□□□□□ -1.41
TDP1YBR223C GPI12P23797 304 aa6.26□□□□□ -1.41
TDP1YBR223C MRP17P28778 131 aa6.26□□□□□ -1.41
TDP1YBR223C DCG1P32460 244 aa6.26□□□□□ -1.41
TDP1YBR223C PPG1P32838 368 aa6.26□□□□□ -1.41
TDP1YBR223C CIS3P47001 227 aa6.26□□□□□ -1.41
TDP1YBR223C LSM1P47017 172 aaKnown RBP6.26□□□□□ -1.41
TDP1YBR223C GNP1P48813 663 aa6.26□□□□□ -1.41
TDP1YBR223C UBC12P52491 188 aa6.26□□□□□ -1.41
TDP1YBR223C NCE101Q02820 53 aa6.26□□□□□ -1.41
TDP1YBR223C KAP120Q02932 1032 aa6.26□□□□□ -1.41
TDP1YBR223C GAS2Q06135 555 aa6.26□□□□□ -1.41
TDP1YBR223C YPR174CQ06616 221 aaPredicted RBP6.26□□□□□ -1.41
TDP1YBR223C YLR031WQ07978 186 aa6.26□□□□□ -1.41
TDP1YBR223C HRT1Q08273 121 aa6.26□□□□□ -1.41
TDP1YBR223C ATP14Q12349 124 aa6.26□□□□□ -1.41
TDP1YBR223C TRM13Q12383 476 aa6.26□□□□□ -1.41
TDP1YBR223C AAC1P04710 309 aa6.25□□□□□ -1.41
TDP1YBR223C RPL20AP0CX23 172 aaKnown RBP6.25□□□□□ -1.41
TDP1YBR223C RPL20BP0CX24 172 aaPredicted RBP6.25□□□□□ -1.41
TDP1YBR223C GAS1P22146 559 aaKnown RBP6.25□□□□□ -1.41
TDP1YBR223C ERG4P25340 473 aa6.25□□□□□ -1.41
TDP1YBR223C SLC1P33333 303 aa6.25□□□□□ -1.41
TDP1YBR223C MRPL36P36531 177 aa6.25□□□□□ -1.41
TDP1YBR223C SDS24P38314 527 aa6.25□□□□□ -1.41
TDP1YBR223C VPS52P39904 641 aa6.25□□□□□ -1.41
TDP1YBR223C SMB1P40018 196 aaKnown RBP6.25□□□□□ -1.41
TDP1YBR223C CCC1P47818 322 aa6.25□□□□□ -1.41
TDP1YBR223C LYS20P48570 428 aaKnown RBP6.25□□□□□ -1.41
TDP1YBR223C YGR042WP53227 271 aa6.25□□□□□ -1.41
TDP1YBR223C GIM3P53900 129 aa6.25□□□□□ -1.41
TDP1YBR223C ARG5,6Q01217 863 aa6.25□□□□□ -1.41
TDP1YBR223C SIZ1Q04195 904 aa6.25□□□□□ -1.41
TDP1YBR223C YLR352WQ06479 807 aa6.25□□□□□ -1.41
TDP1YBR223C YOL036WQ08206 761 aa6.25□□□□□ -1.41
TDP1YBR223C RDR1Q08904 546 aa6.25□□□□□ -1.41
TDP1YBR223C LYS21Q12122 440 aaKnown RBP6.25□□□□□ -1.41
TDP1YBR223C MEX67Q99257 599 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms