RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W RPL15BP54780 204 aaPredicted RBP3.41□□□□□ -1.86
SSL1YLR005W ACS1Q01574 713 aa3.41□□□□□ -1.86
SSL1YLR005W API2Q04413 109 aa3.41□□□□□ -1.86
SSL1YLR005W YHC1Q05900 231 aaKnown RBP3.41□□□□□ -1.86
SSL1YLR005W YDL211CQ12121 372 aa3.41□□□□□ -1.86
SSL1YLR005W RPN6Q12377 434 aa3.41□□□□□ -1.86
SSL1YLR005W GEP5Q12393 293 aa3.41□□□□□ -1.86
SSL1YLR005W GAL1P04385 528 aa3.4□□□□□ -1.86
SSL1YLR005W RHO1P06780 209 aaKnown RBP3.4□□□□□ -1.86
SSL1YLR005W MDH2P22133 377 aa3.4□□□□□ -1.86
SSL1YLR005W SCO1P23833 295 aa3.4□□□□□ -1.86
SSL1YLR005W DBF20P32328 564 aa3.4□□□□□ -1.86
SSL1YLR005W MRE11P32829 692 aa3.4□□□□□ -1.86
SSL1YLR005W NIC96P34077 839 aa3.4□□□□□ -1.86
SSL1YLR005W CHK1P38147 527 aa3.4□□□□□ -1.86
SSL1YLR005W ZTA1P38230 334 aaKnown RBP3.4□□□□□ -1.86
SSL1YLR005W YHL044WP38727 235 aa3.4□□□□□ -1.86
SSL1YLR005W MNN9P39107 395 aaKnown RBP3.4□□□□□ -1.86
SSL1YLR005W GAT2P40209 560 aa3.4□□□□□ -1.86
SSL1YLR005W POP1P41812 875 aa3.4□□□□□ -1.86
SSL1YLR005W IDP2P41939 412 aa3.4□□□□□ -1.86
SSL1YLR005W GLO1P50107 326 aa3.4□□□□□ -1.86
SSL1YLR005W SNF12P53628 566 aa3.4□□□□□ -1.86
SSL1YLR005W REX2P54964 269 aaKnown RBP3.4□□□□□ -1.86
SSL1YLR005W VBA4Q04602 768 aaKnown RBP3.4□□□□□ -1.86
SSL1YLR005W COX20Q04935 205 aa3.4□□□□□ -1.86
SSL1YLR005W UTP21Q06078 939 aaPredicted RBP3.4□□□□□ -1.86
SSL1YLR005W IRC19Q07843 230 aa3.4□□□□□ -1.86
SSL1YLR005W RDL2Q08742 149 aaKnown RBP3.4□□□□□ -1.86
SSL1YLR005W MCP1Q12106 302 aa3.4□□□□□ -1.86
SSL1YLR005W ARG81P05085 880 aa3.39□□□□□ -1.87
SSL1YLR005W MER1P16523 270 aa3.39□□□□□ -1.87
SSL1YLR005W PHO81P17442 1178 aa3.39□□□□□ -1.87
SSL1YLR005W RPS1BP23248 255 aaKnown RBP3.39□□□□□ -1.87
SSL1YLR005W RPC19P28000 142 aaKnown RBP3.39□□□□□ -1.87
SSL1YLR005W RAD14P28519 371 aa3.39□□□□□ -1.87
SSL1YLR005W PTC1P35182 281 aa3.39□□□□□ -1.87
SSL1YLR005W MRPL17P36528 281 aa3.39□□□□□ -1.87
SSL1YLR005W MTC4P38335 694 aaKnown RBP3.39□□□□□ -1.87
SSL1YLR005W YHR180WP38868 163 aa3.39□□□□□ -1.87
SSL1YLR005W NAB3P38996 802 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SSL1YLR005W RGI1P40043 161 aaPredicted RBP3.39□□□□□ -1.87
SSL1YLR005W ARF3P40994 183 aaRIP-Chip data3.39□□□□□ -1.87not detected
SSL1YLR005W TAX4P47030 604 aa3.39□□□□□ -1.87
SSL1YLR005W ARC35P53731 342 aaKnown RBP3.39□□□□□ -1.87
SSL1YLR005W YNR068CP53754 272 aa3.39□□□□□ -1.87
SSL1YLR005W INP1Q03694 420 aa3.39□□□□□ -1.87
SSL1YLR005W RVB1Q03940 463 aaKnown RBP3.39□□□□□ -1.87
SSL1YLR005W SNX41Q04053 625 aa3.39□□□□□ -1.87
SSL1YLR005W YPR147CQ06522 304 aaKnown RBP3.39□□□□□ -1.87
SSL1YLR005W ULA1Q12059 462 aa3.39□□□□□ -1.87
SSL1YLR005W NSL1Q12143 216 aa3.39□□□□□ -1.87
SSL1YLR005W TPK2P06245 380 aa3.38□□□□□ -1.87
SSL1YLR005W PEP4P07267 405 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W CTA1P15202 515 aa3.38□□□□□ -1.87
SSL1YLR005W ITR1P30605 584 aa3.38□□□□□ -1.87
SSL1YLR005W YKL187CP34231 750 aa3.38□□□□□ -1.87
SSL1YLR005W YBR220CP38318 560 aa3.38□□□□□ -1.87
SSL1YLR005W BIG1P38813 335 aa3.38□□□□□ -1.87
SSL1YLR005W HXT9P40885 567 aa3.38□□□□□ -1.87
SSL1YLR005W YFL051CP43552 160 aa3.38□□□□□ -1.87
SSL1YLR005W YFR054CP43622 192 aa3.38□□□□□ -1.87
SSL1YLR005W SLD3P53135 668 aa3.38□□□□□ -1.87
SSL1YLR005W TWF1P53250 332 aa3.38□□□□□ -1.87
SSL1YLR005W PCP1P53259 346 aa3.38□□□□□ -1.87
SSL1YLR005W COS6P53344 381 aa3.38□□□□□ -1.87
SSL1YLR005W HXT11P54862 567 aa3.38□□□□□ -1.87
SSL1YLR005W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SSL1YLR005W RSN1Q03516 953 aa3.38□□□□□ -1.87
SSL1YLR005W YDR179W-AQ03983 463 aa3.38□□□□□ -1.87
SSL1YLR005W GGA1Q06336 557 aa3.38□□□□□ -1.87
SSL1YLR005W IZH3Q07959 543 aa3.38□□□□□ -1.87
SSL1YLR005W YOL131WQ08270 108 aa3.38□□□□□ -1.87
SSL1YLR005W TMC1Q08422 150 aaPredicted RBP3.38□□□□□ -1.87
SSL1YLR005W NIP7Q08962 181 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W YDL109CQ12103 647 aa3.38□□□□□ -1.87
SSL1YLR005W SFM1Q12314 213 aa3.38□□□□□ -1.87
SSL1YLR005W YKL018C-AQ3E7A7 99 aa3.38□□□□□ -1.87
SSL1YLR005W YAL064W-BO13512 126 aa3.38□□□□□ -1.87
SSL1YLR005W THP2O13539 261 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W ATP2P00830 511 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W CSM1P25651 190 aa3.38□□□□□ -1.87
SSL1YLR005W HIR2P32480 875 aa3.38□□□□□ -1.87
SSL1YLR005W CYS4P32582 507 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W RPT5P33297 434 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W SLC1P33333 303 aa3.38□□□□□ -1.87
SSL1YLR005W ROT2P38138 954 aa3.38□□□□□ -1.87
SSL1YLR005W TSC10P38342 320 aa3.38□□□□□ -1.87
SSL1YLR005W FET3P38993 636 aa3.38□□□□□ -1.87
SSL1YLR005W RFC4P40339 323 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W IMA5P40884 581 aa3.38□□□□□ -1.87
SSL1YLR005W YGR126WP53274 230 aa3.38□□□□□ -1.87
SSL1YLR005W MNT4P53745 580 aa3.38□□□□□ -1.87
SSL1YLR005W RPL6AQ02326 176 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W RSC9Q03124 581 aa3.38□□□□□ -1.87
SSL1YLR005W NGL2Q03264 515 aaKnown RBP3.38□□□□□ -1.87
SSL1YLR005W RNH1Q04740 348 aa3.38□□□□□ -1.87
SSL1YLR005W ARV1Q06541 321 aa3.38□□□□□ -1.87
SSL1YLR005W RRT8Q08219 342 aa3.38□□□□□ -1.87
SSL1YLR005W BRX1Q08235 291 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 111 ms