RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W NCE101Q02820 53 aa2.21□□□□□ -2.06
VPS41YDR080W YMR027WQ04371 470 aa2.21□□□□□ -2.06
VPS41YDR080W URC2Q04411 772 aa2.21□□□□□ -2.06
VPS41YDR080W PAL1Q05518 499 aaKnown RBP2.21□□□□□ -2.06
VPS41YDR080W VAC14Q06708 880 aa2.21□□□□□ -2.06
VPS41YDR080W APL4Q12028 832 aa2.21□□□□□ -2.06
VPS41YDR080W RGS2Q99188 309 aa2.21□□□□□ -2.06
VPS41YDR080W FET3P38993 636 aa2.21□□□□□ -2.06
VPS41YDR080W ALG5P40350 334 aa2.21□□□□□ -2.06
VPS41YDR080W AYR1P40471 297 aa2.21□□□□□ -2.06
VPS41YDR080W REE1P40893 198 aa2.21□□□□□ -2.06
VPS41YDR080W MRPL13Q02204 264 aa2.21□□□□□ -2.06
VPS41YDR080W PET191Q02772 108 aa2.21□□□□□ -2.06
VPS41YDR080W RIF2Q06208 395 aa2.21□□□□□ -2.06
VPS41YDR080W YOR214CQ12282 236 aa2.21□□□□□ -2.06
VPS41YDR080W HEM15P16622 393 aa2.2□□□□□ -2.06
VPS41YDR080W ART10P18634 518 aaKnown RBP2.2□□□□□ -2.06
VPS41YDR080W HCS1P34243 683 aa2.2□□□□□ -2.06
VPS41YDR080W RPC37P36121 282 aa2.2□□□□□ -2.06
VPS41YDR080W SPC34P36131 295 aa2.2□□□□□ -2.06
VPS41YDR080W YJL068CP40363 299 aa2.2□□□□□ -2.06
VPS41YDR080W AXL1P40851 1208 aa2.2□□□□□ -2.06
VPS41YDR080W LSG1P53145 640 aaKnown RBP2.2□□□□□ -2.06
VPS41YDR080W MPA43P53583 542 aaPredicted RBP2.2□□□□□ -2.06
VPS41YDR080W YNL181WP53878 407 aa2.2□□□□□ -2.06
VPS41YDR080W YPL039WQ03080 316 aa2.2□□□□□ -2.06
VPS41YDR080W ARP10Q04549 284 aa2.2□□□□□ -2.06
VPS41YDR080W ADH6Q04894 360 aaKnown RBP2.2□□□□□ -2.06
VPS41YDR080W RAF1Q06891 181 aa2.2□□□□□ -2.06
VPS41YDR080W ATG34Q12292 412 aa2.2□□□□□ -2.06
VPS41YDR080W FOL3Q12676 427 aaPredicted RBP2.2□□□□□ -2.06
VPS41YDR080W YMR030W-AQ3E760 96 aa2.2□□□□□ -2.06
VPS41YDR080W ARF1P11076 181 aaKnown RBP2.2□□□□□ -2.06
VPS41YDR080W SCO1P23833 295 aa2.2□□□□□ -2.06
VPS41YDR080W PHA2P32452 334 aa2.2□□□□□ -2.06
VPS41YDR080W AUR1P36107 401 aaPredicted RBP2.2□□□□□ -2.06
VPS41YDR080W ARN2P38724 620 aa2.2□□□□□ -2.06
VPS41YDR080W BZZ1P38822 633 aa2.2□□□□□ -2.06
VPS41YDR080W PEX18P38855 283 aa2.2□□□□□ -2.06
VPS41YDR080W PHO90P39535 881 aa2.2□□□□□ -2.06
VPS41YDR080W SLZ1P40167 298 aa2.2□□□□□ -2.06
VPS41YDR080W RIC1P40395 1056 aa2.2□□□□□ -2.06
VPS41YDR080W YFL051CP43552 160 aa2.2□□□□□ -2.06
VPS41YDR080W ATG27P46989 271 aa2.2□□□□□ -2.06
VPS41YDR080W AIM22P47051 409 aa2.2□□□□□ -2.06
VPS41YDR080W RMI1Q02685 241 aa2.2□□□□□ -2.06
VPS41YDR080W VPS60Q03390 229 aa2.2□□□□□ -2.06
VPS41YDR080W SEC10Q06245 871 aa2.2□□□□□ -2.06
VPS41YDR080W NMT1P14743 455 aa2.19□□□□□ -2.06
VPS41YDR080W MCK1P21965 375 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W YKL187CP34231 750 aa2.19□□□□□ -2.06
VPS41YDR080W YBR220CP38318 560 aa2.19□□□□□ -2.06
VPS41YDR080W RPL6AQ02326 176 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W SWP1Q02795 286 aa2.19□□□□□ -2.06
VPS41YDR080W SML1Q04964 104 aa2.19□□□□□ -2.06
VPS41YDR080W TMC1Q08422 150 aaPredicted RBP2.19□□□□□ -2.06
VPS41YDR080W YDL180WQ12301 547 aa2.19□□□□□ -2.06
VPS41YDR080W PSF1Q12488 208 aa2.19□□□□□ -2.06
VPS41YDR080W CTR86P25355 563 aa2.19□□□□□ -2.06
VPS41YDR080W OCA4P25366 362 aa2.19□□□□□ -2.06
VPS41YDR080W RAD51P25454 400 aa2.19□□□□□ -2.06
VPS41YDR080W HSP150P32478 413 aa2.19□□□□□ -2.06
VPS41YDR080W SOF1P33750 489 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W NSG1P38837 291 aa2.19□□□□□ -2.06
VPS41YDR080W MRX1P40050 688 aa2.19□□□□□ -2.06
VPS41YDR080W PFK26P40433 827 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W INA22P40576 216 aa2.19□□□□□ -2.06
VPS41YDR080W YRB1P41920 201 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W IDP2P41939 412 aa2.19□□□□□ -2.06
VPS41YDR080W TPC1P53257 314 aa2.19□□□□□ -2.06
VPS41YDR080W GTR2P53290 341 aa2.19□□□□□ -2.06
VPS41YDR080W IST1P53843 298 aaPredicted RBP2.19□□□□□ -2.06
VPS41YDR080W SLM2P53955 656 aa2.19□□□□□ -2.06
VPS41YDR080W CTL1Q03220 320 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W VTI1Q04338 217 aa2.19□□□□□ -2.06
VPS41YDR080W BUD22Q04347 519 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W SRL2Q12020 392 aa2.19□□□□□ -2.06
VPS41YDR080W NOP58Q12499 511 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W RHO1P06780 209 aaKnown RBP2.19□□□□□ -2.06
VPS41YDR080W ZIP1P31111 875 aa2.19□□□□□ -2.06
VPS41YDR080W PRY2P36110 329 aa2.19□□□□□ -2.06
VPS41YDR080W YIR020CP40575 100 aa2.19□□□□□ -2.06
VPS41YDR080W MNT4P53745 580 aa2.19□□□□□ -2.06
VPS41YDR080W SHR3Q02774 210 aa2.19□□□□□ -2.06
VPS41YDR080W ATG26Q06321 1198 aa2.19□□□□□ -2.06
VPS41YDR080W ARR1Q06596 294 aa2.19□□□□□ -2.06
VPS41YDR080W MHF1Q3E835 90 aa2.19□□□□□ -2.06
VPS41YDR080W YOL087CQ99247 1116 aa2.19□□□□□ -2.06
VPS41YDR080W CBF1P17106 351 aa2.18□□□□□ -2.06
VPS41YDR080W RPS5P26783 225 aaKnown RBP2.18□□□□□ -2.06
VPS41YDR080W ITR1P30605 584 aa2.18□□□□□ -2.06
VPS41YDR080W SSO1P32867 290 aa2.18□□□□□ -2.06
VPS41YDR080W ETR1P38071 380 aa2.18□□□□□ -2.06
VPS41YDR080W AST2P39945 430 aaKnown RBP2.18□□□□□ -2.06
VPS41YDR080W DUG3P53871 357 aa2.18□□□□□ -2.06
VPS41YDR080W ATG38Q05789 226 aaKnown RBP2.18□□□□□ -2.06
VPS41YDR080W YLR281CQ05863 155 aa2.18□□□□□ -2.06
VPS41YDR080W GMC2Q06201 188 aa2.18□□□□□ -2.06
VPS41YDR080W VPS74Q06385 345 aa2.18□□□□□ -2.06
VPS41YDR080W MSA1Q08471 629 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms