RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W BZZ1P38822 633 aa1.49□□□□□ -2.17
TRM3YDL112W NSG1P38837 291 aa1.49□□□□□ -2.17
TRM3YDL112W ATG7P38862 630 aa1.49□□□□□ -2.17
TRM3YDL112W YER010CP40011 234 aa1.49□□□□□ -2.17
TRM3YDL112W YJR154WP47181 346 aa1.49□□□□□ -2.17
TRM3YDL112W MEP3P53390 489 aa1.49□□□□□ -2.17
TRM3YDL112W BIO4P53630 237 aa1.49□□□□□ -2.17
TRM3YDL112W VPS60Q03390 229 aa1.49□□□□□ -2.17
TRM3YDL112W RAD33Q04231 177 aa1.49□□□□□ -2.17
TRM3YDL112W SEI1Q06058 285 aa1.49□□□□□ -2.17
TRM3YDL112W GMC2Q06201 188 aa1.49□□□□□ -2.17
TRM3YDL112W NIP7Q08962 181 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W YLR053CQ12026 108 aa1.49□□□□□ -2.17
TRM3YDL112W PSY3Q12318 242 aa1.49□□□□□ -2.17
TRM3YDL112W PRB1P09232 635 aa1.49□□□□□ -2.17
TRM3YDL112W GPI12P23797 304 aa1.49□□□□□ -2.17
TRM3YDL112W YCR061WP25639 631 aa1.49□□□□□ -2.17
TRM3YDL112W LOS1P33418 1100 aaPredicted RBP1.49□□□□□ -2.17
TRM3YDL112W FLO10P36170 1169 aa1.49□□□□□ -2.17
TRM3YDL112W ROT2P38138 954 aa1.49□□□□□ -2.17
TRM3YDL112W PRS3P38689 320 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W IMD2P38697 523 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W PTH1P38876 190 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W ALP1P38971 573 aa1.49□□□□□ -2.17
TRM3YDL112W MNN9P39107 395 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W ABM1P47146 123 aa1.49□□□□□ -2.17
TRM3YDL112W STE24P47154 453 aa1.49□□□□□ -2.17
TRM3YDL112W PAC10P48363 199 aa1.49□□□□□ -2.17
TRM3YDL112W IMD3P50095 523 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W YGL117WP53133 265 aa1.49□□□□□ -2.17
TRM3YDL112W RBG2P53295 368 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W SVL3Q03088 825 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W DPB4Q04603 196 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W STE23Q06010 1027 aa1.49□□□□□ -2.17
TRM3YDL112W YDL242WQ07746 117 aa1.49□□□□□ -2.17
TRM3YDL112W YDL211CQ12121 372 aa1.49□□□□□ -2.17
TRM3YDL112W YBR126W-AQ8TGU7 68 aa1.49□□□□□ -2.17
TRM3YDL112W YBR085C-AO43137 85 aa1.49□□□□□ -2.17
TRM3YDL112W CLB3P24870 427 aa1.49□□□□□ -2.17
TRM3YDL112W YME2P32843 850 aa1.49□□□□□ -2.17
TRM3YDL112W ASK1P35734 292 aa1.49□□□□□ -2.17
TRM3YDL112W CHK1P38147 527 aa1.49□□□□□ -2.17
TRM3YDL112W COG3P40094 801 aa1.49□□□□□ -2.17
TRM3YDL112W SNM1P40993 198 aa1.49□□□□□ -2.17
TRM3YDL112W URB2P47108 1174 aa1.49□□□□□ -2.17
TRM3YDL112W TPC1P53257 314 aa1.49□□□□□ -2.17
TRM3YDL112W SDC1Q03323 175 aa1.49□□□□□ -2.17
TRM3YDL112W OSW1Q08692 278 aa1.49□□□□□ -2.17
TRM3YDL112W PRP46Q12417 451 aaPredicted RBP1.49□□□□□ -2.17
TRM3YDL112W NOP58Q12499 511 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W RHO1P06780 209 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W CLB2P24869 491 aa1.49□□□□□ -2.17
TRM3YDL112W CDC39P25655 2108 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W DEP1P31385 405 aa1.49□□□□□ -2.17
TRM3YDL112W PUP2P32379 260 aa1.49□□□□□ -2.17
TRM3YDL112W MRPS5P33759 307 aa1.49□□□□□ -2.17
TRM3YDL112W HCS1P34243 683 aa1.49□□□□□ -2.17
TRM3YDL112W GRE3P38715 327 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
TRM3YDL112W UTP9P38882 575 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W VPS41P38959 992 aa1.49□□□□□ -2.17
TRM3YDL112W ALG5P40350 334 aa1.49□□□□□ -2.17
TRM3YDL112W LAS21P40367 830 aa1.49□□□□□ -2.17
TRM3YDL112W YPT32P51996 222 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W YGL235WP53071 178 aa1.49□□□□□ -2.17
TRM3YDL112W IMO32P53219 342 aa1.49□□□□□ -2.17
TRM3YDL112W RPL6AQ02326 176 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W SNA4Q07549 140 aa1.49□□□□□ -2.17
TRM3YDL112W RRT8Q08219 342 aa1.49□□□□□ -2.17
TRM3YDL112W NCA2Q12374 616 aa1.49□□□□□ -2.17
TRM3YDL112W APC2Q12440 853 aa1.49□□□□□ -2.17
TRM3YDL112W PSF1Q12488 208 aa1.49□□□□□ -2.17
TRM3YDL112W ARF1P11076 181 aaKnown RBP1.48□□□□□ -2.17
TRM3YDL112W RPB8P20436 146 aa1.48□□□□□ -2.17
TRM3YDL112W APA2P22108 325 aa1.48□□□□□ -2.17
TRM3YDL112W VMA16P23968 213 aa1.48□□□□□ -2.17
TRM3YDL112W RVS161P25343 265 aaKnown RBP1.48□□□□□ -2.17
TRM3YDL112W RAD14P28519 371 aa1.48□□□□□ -2.17
TRM3YDL112W TRS65P32893 560 aa1.48□□□□□ -2.17
TRM3YDL112W MSN4P33749 630 aa1.48□□□□□ -2.17
TRM3YDL112W AUR1P36107 401 aaPredicted RBP1.48□□□□□ -2.17
TRM3YDL112W YER184CP39961 794 aa1.48□□□□□ -2.17
TRM3YDL112W CIN1P40987 1014 aa1.48□□□□□ -2.17
TRM3YDL112W SBH2P52871 88 aa1.48□□□□□ -2.17
TRM3YDL112W YLR036CQ07986 203 aa1.48□□□□□ -2.17
TRM3YDL112W RSA1Q08932 381 aa1.48□□□□□ -2.17
TRM3YDL112W YLR112WQ12130 139 aa1.48□□□□□ -2.17
TRM3YDL112W YKL018C-AQ3E7A7 99 aa1.48□□□□□ -2.17
TRM3YDL112W KGD1P20967 1014 aaKnown RBP1.48□□□□□ -2.17
TRM3YDL112W CSM1P25651 190 aa1.48□□□□□ -2.17
TRM3YDL112W HSP150P32478 413 aa1.48□□□□□ -2.17
TRM3YDL112W ECM15P35195 104 aa1.48□□□□□ -2.17
TRM3YDL112W YHR177WP38867 453 aa1.48□□□□□ -2.17
TRM3YDL112W REE1P40893 198 aa1.48□□□□□ -2.17
TRM3YDL112W FAR3P46671 204 aa1.48□□□□□ -2.17
TRM3YDL112W PRM15Q03262 622 aa1.48□□□□□ -2.17
TRM3YDL112W SFM1Q12314 213 aa1.48□□□□□ -2.17
TRM3YDL112W MHF1Q3E835 90 aa1.48□□□□□ -2.17
TRM3YDL112W DET1Q99288 334 aaKnown RBP1.48□□□□□ -2.17
TRM3YDL112W REP1P03871 373 aa1.48□□□□□ -2.17
TRM3YDL112W AAC1P04710 309 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 86.7 ms