RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeast

Gene HAL1, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAL1	YPR005C	CWP1	P28319	239 aa		4.87	□□□□□ -1.63
HAL1	YPR005C	FUN26	P31381	517 aa		4.87	□□□□□ -1.63
HAL1	YPR005C	SLM1	P40485	686 aa		4.87	□□□□□ -1.63
HAL1	YPR005C	MTQ1	P53944	314 aa		4.87	□□□□□ -1.63
HAL1	YPR005C	REX2	P54964	269 aa	Known RBP	4.87	□□□□□ -1.63
HAL1	YPR005C	YPR091C	Q06833	770 aa		4.87	□□□□□ -1.63
HAL1	YPR005C	POM33	Q12164	279 aa		4.87	□□□□□ -1.63
HAL1	YPR005C	YGK3	Q12222	375 aa	Predicted RBP	4.87	□□□□□ -1.63
HAL1	YPR005C	ADF1	Q2V2Q1	113 aa		4.87	□□□□□ -1.63
HAL1	YPR005C	HPR1	P17629	752 aa	Known RBP	4.86	□□□□□ -1.63
HAL1	YPR005C	MET16	P18408	261 aa	Predicted RBP	4.86	□□□□□ -1.63
HAL1	YPR005C	PRR1	P28708	518 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	PRM9	P39551	298 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	YER085C	P40058	173 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	COA1	P40452	197 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	SNM1	P40993	198 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	HAC1	P41546	238 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	PMT4	P46971	762 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	MNT4	P53745	580 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	YPL077C	Q02831	240 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	RTN1	Q04947	295 aa	Known RBP	4.86	□□□□□ -1.63
HAL1	YPR005C	ASR1	Q06834	288 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	SRL1	Q08673	210 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	TMS1	Q12116	473 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	HMS1	Q12398	434 aa		4.86	□□□□□ -1.63
HAL1	YPR005C	ILV1	P00927	576 aa	Known RBP	4.85	□□□□□ -1.63
HAL1	YPR005C	PRB1	P09232	635 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	CTA1	P15202	515 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	CPR4	P25334	318 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	RPL16B	P26785	198 aa	Known RBP	4.85	□□□□□ -1.63
HAL1	YPR005C	KRE6	P32486	720 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	DOA4	P32571	926 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	SHQ1	P40486	507 aa	Predicted RBP	4.85	□□□□□ -1.63
HAL1	YPR005C	MSS2	P40990	351 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	SWC4	P53201	476 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	YMR209C	Q03648	457 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	YLR012C	Q07927	99 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	FCY22	Q12119	530 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	ICT1	Q12385	394 aa		4.85	□□□□□ -1.63
HAL1	YPR005C	HEM4	P06174	275 aa		4.84	□□□□□ -1.63
HAL1	YPR005C	RPL23A	P0CX41	137 aa	Known RBP	4.84	□□□□□ -1.63
HAL1	YPR005C	RPL23B	P0CX42	137 aa	Known RBP	4.84	□□□□□ -1.63
HAL1	YPR005C	MRP1	P10662	321 aa	Known RBP	4.84	□□□□□ -1.63
HAL1	YPR005C	CHA1	P25379	360 aa	Known RBP	4.84	□□□□□ -1.63
HAL1	YPR005C	RPC37	P36121	282 aa		4.84	□□□□□ -1.63
HAL1	YPR005C	YIL067C	P40514	678 aa		4.84	□□□□□ -1.63
HAL1	YPR005C	TRM82	Q03774	444 aa		4.84	□□□□□ -1.63
HAL1	YPR005C	GRS2	Q06817	618 aa		4.84	□□□□□ -1.63
HAL1	YPR005C	RDL2	Q08742	149 aa	Known RBP	4.84	□□□□□ -1.63
HAL1	YPR005C	SLM3	Q12093	417 aa		4.84	□□□□□ -1.63
HAL1	YPR005C	ATG31	Q12421	196 aa		4.84	□□□□□ -1.63
HAL1	YPR005C	RPL31A	P0C2H8	113 aa	Known RBP	4.83	□□□□□ -1.64
HAL1	YPR005C	SRB4	P32569	687 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
HAL1	YPR005C	IDP2	P41939	412 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	OTU1	P43558	301 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	CIN2	P46670	268 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	MST27	P53176	234 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	CGR1	P53188	120 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	SHY1	P53266	389 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	CWC25	P53854	179 aa	Known RBP	4.83	□□□□□ -1.64
HAL1	YPR005C	PGA2	P53903	129 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	CRZ1	P53968	678 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	SNX41	Q04053	625 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	RIF2	Q06208	395 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	HNT3	Q08702	217 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	PPT2	Q12036	173 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	YOR029W	Q12243	111 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	UTP23	Q12339	254 aa	Known RBP	4.83	□□□□□ -1.64
HAL1	YPR005C	RPN6	Q12377	434 aa		4.83	□□□□□ -1.64
HAL1	YPR005C	DAL82	P21705	255 aa		4.82	□□□□□ -1.64
HAL1	YPR005C	NDT80	P38830	627 aa		4.82	□□□□□ -1.64
HAL1	YPR005C	MRPL50	P53724	139 aa		4.82	□□□□□ -1.64
HAL1	YPR005C	TSR1	Q07381	788 aa	Known RBP	4.82	□□□□□ -1.64
HAL1	YPR005C	PAM18	Q07914	168 aa		4.82	□□□□□ -1.64
HAL1	YPR005C	FRE8	Q12209	686 aa		4.82	□□□□□ -1.64
HAL1	YPR005C	YDL199C	Q12407	687 aa		4.82	□□□□□ -1.64
HAL1	YPR005C	YCL021W-A	Q96VH3	125 aa		4.82	□□□□□ -1.64
HAL1	YPR005C	REP1	P03871	373 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	RPS18A	P0CX55	146 aa	Known RBP	4.81	□□□□□ -1.64
HAL1	YPR005C	RPS18B	P0CX56	146 aa	Predicted RBP	4.81	□□□□□ -1.64
HAL1	YPR005C	MSI1	P13712	422 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	MIR1	P23641	311 aa	Known RBP	4.81	□□□□□ -1.64
HAL1	YPR005C	ZIP1	P31111	875 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	NUP2	P32499	720 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	PDC2	P32896	925 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	CYM1	P32898	989 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	SDH3	P33421	198 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	YKL063C	P35725	167 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	PRS4	P38063	326 aa	Predicted RBP	4.81	□□□□□ -1.64
HAL1	YPR005C	BIG1	P38813	335 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	MTM1	P53320	366 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	ALG11	P53954	548 aa	Known RBP	4.81	□□□□□ -1.64
HAL1	YPR005C	OST6	Q03723	332 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	YOR387C	Q08910	206 aa		4.81	□□□□□ -1.64
HAL1	YPR005C	RRP42	Q12277	265 aa	Predicted RBP	4.81	□□□□□ -1.64
HAL1	YPR005C	ARG80	P07249	177 aa		4.8	□□□□□ -1.64
HAL1	YPR005C	CPR3	P25719	182 aa		4.8	□□□□□ -1.64
HAL1	YPR005C	AIM10	P39965	576 aa	Known RBP	4.8	□□□□□ -1.64
HAL1	YPR005C	DDI1	P40087	428 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms