RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W SPP2Q02521 185 aa3.28□□□□□ -1.88
HSH49YOR319W RNH1Q04740 348 aa3.28□□□□□ -1.88
HSH49YOR319W PBP4Q07362 185 aaKnown RBP3.28□□□□□ -1.88
HSH49YOR319W MFG1Q07684 458 aa3.28□□□□□ -1.88
HSH49YOR319W YLR012CQ07927 99 aa3.28□□□□□ -1.88
HSH49YOR319W FRE8Q12209 686 aa3.28□□□□□ -1.88
HSH49YOR319W ATP6P00854 259 aa3.27□□□□□ -1.89
HSH49YOR319W CTA1P15202 515 aa3.27□□□□□ -1.89
HSH49YOR319W PRR1P28708 518 aa3.27□□□□□ -1.89
HSH49YOR319W CSE2P33308 149 aa3.27□□□□□ -1.89
HSH49YOR319W ANR2P36090 516 aaPredicted RBP3.27□□□□□ -1.89
HSH49YOR319W RFS1P38234 210 aaKnown RBP3.27□□□□□ -1.89
HSH49YOR319W RCK2P38623 610 aa3.27□□□□□ -1.89
HSH49YOR319W KRE9P39005 276 aa3.27□□□□□ -1.89
HSH49YOR319W YNL208WP40159 199 aaKnown RBP3.27□□□□□ -1.89
HSH49YOR319W AGP3P43548 558 aa3.27□□□□□ -1.89
HSH49YOR319W AGX1P43567 385 aa3.27□□□□□ -1.89
HSH49YOR319W BIR1P47134 954 aa3.27□□□□□ -1.89
HSH49YOR319W YHC1Q05900 231 aaKnown RBP3.27□□□□□ -1.89
HSH49YOR319W YLR173WQ06247 608 aa3.27□□□□□ -1.89
HSH49YOR319W SFM1Q12314 213 aa3.27□□□□□ -1.89
HSH49YOR319W MED4Q12343 284 aa3.27□□□□□ -1.89
HSH49YOR319W RPN6Q12377 434 aa3.27□□□□□ -1.89
HSH49YOR319W IZH2Q12442 317 aa3.27□□□□□ -1.89
HSH49YOR319W IZH4Q99393 312 aa3.27□□□□□ -1.89
HSH49YOR319W REP1P03871 373 aa3.26□□□□□ -1.89
HSH49YOR319W HPR1P17629 752 aaKnown RBP3.26□□□□□ -1.89
HSH49YOR319W CPR3P25719 182 aa3.26□□□□□ -1.89
HSH49YOR319W LDS1P31379 325 aa3.26□□□□□ -1.89
HSH49YOR319W SKG6P32900 734 aaPredicted RBP3.26□□□□□ -1.89
HSH49YOR319W YER186CP40101 306 aa3.26□□□□□ -1.89
HSH49YOR319W YGR210CP42942 411 aa3.26□□□□□ -1.89
HSH49YOR319W MOB2P43563 287 aa3.26□□□□□ -1.89
HSH49YOR319W ATG18P43601 500 aa3.26□□□□□ -1.89
HSH49YOR319W BNS1P50084 137 aa3.26□□□□□ -1.89
HSH49YOR319W KAP114P53067 1004 aa3.26□□□□□ -1.89
HSH49YOR319W BOR1P53838 576 aa3.26□□□□□ -1.89
HSH49YOR319W SUR7P54003 302 aa3.26□□□□□ -1.89
HSH49YOR319W SED5Q01590 340 aa3.26□□□□□ -1.89
HSH49YOR319W GMC2Q06201 188 aa3.26□□□□□ -1.89
HSH49YOR319W GPN3Q06543 272 aa3.26□□□□□ -1.89
HSH49YOR319W RDL2Q08742 149 aaKnown RBP3.26□□□□□ -1.89
HSH49YOR319W RUD3Q12234 484 aaKnown RBP3.26□□□□□ -1.89
HSH49YOR319W NAG1Q8TGN9 163 aa3.26□□□□□ -1.89
HSH49YOR319W CBS2P14905 389 aa3.25□□□□□ -1.89
HSH49YOR319W RVS161P25343 265 aaKnown RBP3.25□□□□□ -1.89
HSH49YOR319W NAM9P27929 486 aa3.25□□□□□ -1.89
HSH49YOR319W NUP2P32499 720 aa3.25□□□□□ -1.89
HSH49YOR319W YOX1P34161 385 aa3.25□□□□□ -1.89
HSH49YOR319W SDS24P38314 527 aa3.25□□□□□ -1.89
HSH49YOR319W TDA11P38854 504 aa3.25□□□□□ -1.89
HSH49YOR319W SLM1P40485 686 aa3.25□□□□□ -1.89
HSH49YOR319W YGL242CP53066 181 aa3.25□□□□□ -1.89
HSH49YOR319W CRH1P53301 507 aa3.25□□□□□ -1.89
HSH49YOR319W SKI8Q02793 397 aaPredicted RBP3.25□□□□□ -1.89
HSH49YOR319W YPL077CQ02831 240 aa3.25□□□□□ -1.89
HSH49YOR319W SNX41Q04053 625 aa3.25□□□□□ -1.89
HSH49YOR319W COX20Q04935 205 aa3.25□□□□□ -1.89
HSH49YOR319W FSH2Q05015 223 aa3.25□□□□□ -1.89
HSH49YOR319W PLP2Q12017 286 aa3.25□□□□□ -1.89
HSH49YOR319W ATP16Q12165 160 aa3.25□□□□□ -1.89
HSH49YOR319W YOL107WQ12239 342 aa3.25□□□□□ -1.89
HSH49YOR319W ERP3Q12403 225 aa3.25□□□□□ -1.89
HSH49YOR319W PRM4Q12498 284 aa3.25□□□□□ -1.89
HSH49YOR319W YSR3P23501 404 aa3.24□□□□□ -1.89
HSH49YOR319W GIT1P25346 518 aa3.24□□□□□ -1.89
HSH49YOR319W RPL16BP26785 198 aaKnown RBP3.24□□□□□ -1.89
HSH49YOR319W PDC2P32896 925 aa3.24□□□□□ -1.89
HSH49YOR319W KTI12P34253 313 aaKnown RBP3.24□□□□□ -1.89
HSH49YOR319W RPC37P36121 282 aa3.24□□□□□ -1.89
HSH49YOR319W YAR1P46683 200 aa3.24□□□□□ -1.89
HSH49YOR319W AIM23P47015 356 aa3.24□□□□□ -1.89
HSH49YOR319W SWC4P53201 476 aa3.24□□□□□ -1.89
HSH49YOR319W VAC7P53950 1165 aa3.24□□□□□ -1.89
HSH49YOR319W GAS2Q06135 555 aa3.24□□□□□ -1.89
HSH49YOR319W BOP2Q06150 570 aa3.24□□□□□ -1.89
HSH49YOR319W DTD1Q07648 150 aaKnown RBP3.24□□□□□ -1.89
HSH49YOR319W RPN8Q08723 338 aaKnown RBP3.24□□□□□ -1.89
HSH49YOR319W UTP23Q12339 254 aaKnown RBP3.24□□□□□ -1.89
HSH49YOR319W SAL1D6W196 494 aa3.23□□□□□ -1.89
HSH49YOR319W RPL31AP0C2H8 113 aaKnown RBP3.23□□□□□ -1.89
HSH49YOR319W AAT2P23542 418 aaKnown RBP3.23□□□□□ -1.89
HSH49YOR319W PMT2P31382 759 aa3.23□□□□□ -1.89
HSH49YOR319W COS9P36034 407 aa3.23□□□□□ -1.89
HSH49YOR319W TAE1P38340 232 aa3.23□□□□□ -1.89
HSH49YOR319W AIM10P39965 576 aaKnown RBP3.23□□□□□ -1.89
HSH49YOR319W ASR1Q06834 288 aa3.23□□□□□ -1.89
HSH49YOR319W MRX9Q07349 420 aaKnown RBP3.23□□□□□ -1.89
HSH49YOR319W TAF10Q12030 206 aa3.23□□□□□ -1.89
HSH49YOR319W TY3A-GQ12173 290 aa3.23□□□□□ -1.89
HSH49YOR319W MCT1Q12283 360 aa3.23□□□□□ -1.89
HSH49YOR319W TY3A-IQ99219 290 aa3.23□□□□□ -1.89
HSH49YOR319W TDH3P00359 332 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
HSH49YOR319W COX2P00410 251 aa3.22□□□□□ -1.89
HSH49YOR319W STE7P06784 515 aa3.22□□□□□ -1.89
HSH49YOR319W MSF1P08425 469 aa3.22□□□□□ -1.89
HSH49YOR319W DEP1P31385 405 aa3.22□□□□□ -1.89
HSH49YOR319W IMP3P32899 183 aaPredicted RBP3.22□□□□□ -1.89
HSH49YOR319W YKL063CP35725 167 aa3.22□□□□□ -1.89
HSH49YOR319W MCH2P36032 473 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms