RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C PTC1P35182 281 aa3.29□□□□□ -1.88
SGN1YIR001C OAF3P36023 863 aa3.29□□□□□ -1.88
SGN1YIR001C YHL044WP38727 235 aa3.29□□□□□ -1.88
SGN1YIR001C YNL208WP40159 199 aaKnown RBP3.29□□□□□ -1.88
SGN1YIR001C YIL012WP40551 113 aa3.29□□□□□ -1.88
SGN1YIR001C GAB1P41733 394 aa3.29□□□□□ -1.88
SGN1YIR001C YFL051CP43552 160 aa3.29□□□□□ -1.88
SGN1YIR001C YFR054CP43622 192 aa3.29□□□□□ -1.88
SGN1YIR001C COS6P53344 381 aa3.29□□□□□ -1.88
SGN1YIR001C RSN1Q03516 953 aa3.29□□□□□ -1.88
SGN1YIR001C RAD30Q04049 632 aa3.29□□□□□ -1.88
SGN1YIR001C YKU80Q04437 629 aa3.29□□□□□ -1.88
SGN1YIR001C YOR214CQ12282 236 aa3.29□□□□□ -1.88
SGN1YIR001C JLP1Q12358 412 aa3.29□□□□□ -1.88
SGN1YIR001C DBP10Q12389 995 aaKnown RBP3.29□□□□□ -1.88
SGN1YIR001C YAL064W-BO13512 126 aa3.28□□□□□ -1.88
SGN1YIR001C CCW14O13547 238 aa3.28□□□□□ -1.88
SGN1YIR001C RHO1P06780 209 aaKnown RBP3.28□□□□□ -1.88
SGN1YIR001C RPC19P28000 142 aaKnown RBP3.28□□□□□ -1.88
SGN1YIR001C PUP2P32379 260 aa3.28□□□□□ -1.88
SGN1YIR001C CHK1P38147 527 aa3.28□□□□□ -1.88
SGN1YIR001C YBR220CP38318 560 aa3.28□□□□□ -1.88
SGN1YIR001C MTC4P38335 694 aaKnown RBP3.28□□□□□ -1.88
SGN1YIR001C ECM34P38728 170 aa3.28□□□□□ -1.88
SGN1YIR001C ARN1P38731 627 aa3.28□□□□□ -1.88
SGN1YIR001C YHR180WP38868 163 aa3.28□□□□□ -1.88
SGN1YIR001C VPS41P38959 992 aa3.28□□□□□ -1.88
SGN1YIR001C RGI1P40043 161 aaPredicted RBP3.28□□□□□ -1.88
SGN1YIR001C COG3P40094 801 aa3.28□□□□□ -1.88
SGN1YIR001C PRE6P40303 254 aaKnown RBP3.28□□□□□ -1.88
SGN1YIR001C YJL163CP46996 555 aa3.28□□□□□ -1.88
SGN1YIR001C MRM2P53123 320 aa3.28□□□□□ -1.88
SGN1YIR001C RNH1Q04740 348 aa3.28□□□□□ -1.88
SGN1YIR001C ATG38Q05789 226 aaKnown RBP3.28□□□□□ -1.88
SGN1YIR001C COQ11Q05892 277 aa3.28□□□□□ -1.88
SGN1YIR001C SSQ1Q05931 657 aaPredicted RBP3.28□□□□□ -1.88
SGN1YIR001C YEH2Q07950 538 aa3.28□□□□□ -1.88
SGN1YIR001C YOL131WQ08270 108 aa3.28□□□□□ -1.88
SGN1YIR001C MCP1Q12106 302 aa3.28□□□□□ -1.88
SGN1YIR001C RPN6Q12377 434 aa3.28□□□□□ -1.88
SGN1YIR001C TRM13Q12383 476 aa3.28□□□□□ -1.88
SGN1YIR001C THR1P17423 357 aaKnown RBP3.27□□□□□ -1.89
SGN1YIR001C CLB2P24869 491 aa3.27□□□□□ -1.89
SGN1YIR001C CLB3P24870 427 aa3.27□□□□□ -1.89
SGN1YIR001C ITR1P30605 584 aa3.27□□□□□ -1.89
SGN1YIR001C ZTA1P38230 334 aaKnown RBP3.27□□□□□ -1.89
SGN1YIR001C TSC10P38342 320 aa3.27□□□□□ -1.89
SGN1YIR001C MTC6P38849 526 aa3.27□□□□□ -1.89
SGN1YIR001C FAA2P39518 744 aa3.27□□□□□ -1.89
SGN1YIR001C RFC4P40339 323 aaKnown RBP3.27□□□□□ -1.89
SGN1YIR001C LAS21P40367 830 aa3.27□□□□□ -1.89
SGN1YIR001C MOB2P43563 287 aa3.27□□□□□ -1.89
SGN1YIR001C CAF16P43569 289 aa3.27□□□□□ -1.89
SGN1YIR001C BNA2P47125 453 aa3.27□□□□□ -1.89
SGN1YIR001C ADO1P47143 340 aaKnown RBP3.27□□□□□ -1.89
SGN1YIR001C PCP1P53259 346 aa3.27□□□□□ -1.89
SGN1YIR001C YAP1802P53309 568 aa3.27□□□□□ -1.89
SGN1YIR001C ASI1P54074 624 aa3.27□□□□□ -1.89
SGN1YIR001C LGE1Q02796 332 aaKnown RBP3.27□□□□□ -1.89
SGN1YIR001C KAP120Q02932 1032 aa3.27□□□□□ -1.89
SGN1YIR001C UGO1Q03327 502 aa3.27□□□□□ -1.89
SGN1YIR001C KRE28Q04431 385 aa3.27□□□□□ -1.89
SGN1YIR001C FAR8Q05040 523 aa3.27□□□□□ -1.89
SGN1YIR001C DCI1Q08558 271 aa3.27□□□□□ -1.89
SGN1YIR001C YDL109CQ12103 647 aa3.27□□□□□ -1.89
SGN1YIR001C MED2Q12124 431 aa3.27□□□□□ -1.89
SGN1YIR001C MHF1Q3E835 90 aa3.27□□□□□ -1.89
SGN1YIR001C ATP2P00830 511 aaKnown RBP3.26□□□□□ -1.89
SGN1YIR001C ARG81P05085 880 aa3.26□□□□□ -1.89
SGN1YIR001C PUT2P07275 575 aa3.26□□□□□ -1.89
SGN1YIR001C MER1P16523 270 aa3.26□□□□□ -1.89
SGN1YIR001C ERD2P18414 219 aa3.26□□□□□ -1.89
SGN1YIR001C DBP3P20447 523 aaKnown RBP3.26□□□□□ -1.89
SGN1YIR001C DEP1P31385 405 aa3.26□□□□□ -1.89
SGN1YIR001C HIS7P33734 552 aaKnown RBP3.26□□□□□ -1.89
SGN1YIR001C SOF1P33750 489 aaKnown RBP3.26□□□□□ -1.89
SGN1YIR001C MRPL17P36528 281 aa3.26□□□□□ -1.89
SGN1YIR001C BIG1P38813 335 aa3.26□□□□□ -1.89
SGN1YIR001C CAK1P43568 368 aaPredicted RBP3.26□□□□□ -1.89
SGN1YIR001C SBH2P52871 88 aa3.26□□□□□ -1.89
SGN1YIR001C IMA1P53051 589 aa3.26□□□□□ -1.89
SGN1YIR001C TWF1P53250 332 aa3.26□□□□□ -1.89
SGN1YIR001C YGR126WP53274 230 aa3.26□□□□□ -1.89
SGN1YIR001C MRPL19P53875 158 aa3.26□□□□□ -1.89
SGN1YIR001C YML119WQ03208 357 aa3.26□□□□□ -1.89
SGN1YIR001C CTL1Q03220 320 aaKnown RBP3.26□□□□□ -1.89
SGN1YIR001C RSM28Q03430 361 aa3.26□□□□□ -1.89
SGN1YIR001C API2Q04413 109 aa3.26□□□□□ -1.89
SGN1YIR001C VBA4Q04602 768 aaKnown RBP3.26□□□□□ -1.89
SGN1YIR001C UTP21Q06078 939 aaPredicted RBP3.26□□□□□ -1.89
SGN1YIR001C YLR413WQ06689 675 aa3.26□□□□□ -1.89
SGN1YIR001C IRC19Q07843 230 aa3.26□□□□□ -1.89
SGN1YIR001C BRX1Q08235 291 aaKnown RBP3.26□□□□□ -1.89
SGN1YIR001C GRE1Q08969 168 aa3.26□□□□□ -1.89
SGN1YIR001C NCA2Q12374 616 aa3.26□□□□□ -1.89
SGN1YIR001C SET6Q12529 373 aa3.26□□□□□ -1.89
SGN1YIR001C YMR085WP0CF18 432 aa3.25□□□□□ -1.89
SGN1YIR001C RAP1P11938 827 aa3.25□□□□□ -1.89
SGN1YIR001C NUP1P20676 1076 aa3.25□□□□□ -1.89
SGN1YIR001C RPS1BP23248 255 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms